RNA–Protein interactions for RNA: ENST00000587718.5

CAPNS1-204, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-204ENST00000587718 A0A0J9YXY3 114 aa17.9■□□□□ 0.46
CAPNS1-204ENST00000587718 NTM-AS1Q6ZSK4 140 aa17.9■□□□□ 0.46
CAPNS1-204ENST00000587718 TMEM243Q9BU79 118 aa17.9■□□□□ 0.46
CAPNS1-204ENST00000587718 LCE6AA0A183 80 aa17.89■□□□□ 0.45
CAPNS1-204ENST00000587718 C10orf126Q8N4M7 172 aa17.89■□□□□ 0.45
CAPNS1-204ENST00000587718 CBY1Q9Y3M2 126 aa17.89■□□□□ 0.45
CAPNS1-204ENST00000587718 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.88■□□□□ 0.45
CAPNS1-204ENST00000587718 TRGV4A0A0C4DH28 118 aa17.88■□□□□ 0.45
CAPNS1-204ENST00000587718 GAGE12JA6NER3 117 aa17.88■□□□□ 0.45
CAPNS1-204ENST00000587718 F8W1H4 67 aa17.88■□□□□ 0.45
CAPNS1-204ENST00000587718 LINC00694P0DN24 101 aa17.88■□□□□ 0.45
CAPNS1-204ENST00000587718 GAGE4Q13068 117 aa17.88■□□□□ 0.45
CAPNS1-204ENST00000587718 GAGE5Q13069 117 aa17.88■□□□□ 0.45
CAPNS1-204ENST00000587718 GAGE13Q4V321 117 aa17.88■□□□□ 0.45
CAPNS1-204ENST00000587718 RNF183Q96D59 192 aa17.88■□□□□ 0.45
CAPNS1-204ENST00000587718 SPANXDQ9BXN6 97 aa17.88■□□□□ 0.45
CAPNS1-204ENST00000587718 PGPEP1Q9NXJ5 209 aa17.88■□□□□ 0.45
CAPNS1-204ENST00000587718 SPANXCQ9NY87 97 aa17.88■□□□□ 0.45
CAPNS1-204ENST00000587718 A0A0B4J2C4 111 aa17.87■□□□□ 0.45
CAPNS1-204ENST00000587718 FHL2Q14192 279 aa17.87■□□□□ 0.45
CAPNS1-204ENST00000587718 NDUFA12Q9UI09 145 aa17.87■□□□□ 0.45
CAPNS1-204ENST00000587718 LYSTQ99698 3801 aa17.86■□□□□ 0.45
CAPNS1-204ENST00000587718 TMEM101Q96IK0 257 aa17.86■□□□□ 0.45
CAPNS1-204ENST00000587718 CDC42SE2Q9NRR3 84 aa17.86■□□□□ 0.45
CAPNS1-204ENST00000587718 IGLV5-39A0A0G2JS06 123 aa17.85■□□□□ 0.45
CAPNS1-204ENST00000587718 CFC1BP0CG36 223 aa17.84■□□□□ 0.45
CAPNS1-204ENST00000587718 CFC1P0CG37 223 aa17.84■□□□□ 0.45
CAPNS1-204ENST00000587718 RNASE13Q5GAN3 156 aaKnown RBP17.84■□□□□ 0.45
CAPNS1-204ENST00000587718 UBE2L6O14933 153 aa17.83■□□□□ 0.45
CAPNS1-204ENST00000587718 RBX1P62877 108 aa17.83■□□□□ 0.45
CAPNS1-204ENST00000587718 LINC00242Q5T6M2 205 aa17.83■□□□□ 0.45
CAPNS1-204ENST00000587718 PRO1854Q9UHT4 67 aa17.83■□□□□ 0.45
CAPNS1-204ENST00000587718 NDUFA1O15239 70 aa17.83■□□□□ 0.44
CAPNS1-204ENST00000587718 TSPAN13O95857 204 aa17.83■□□□□ 0.44
CAPNS1-204ENST00000587718 LITAFQ99732 161 aa17.83■□□□□ 0.44
CAPNS1-204ENST00000587718 IGHV3-64A0A075B6Q5 118 aa17.82■□□□□ 0.44
CAPNS1-204ENST00000587718 TRAV8-3A0A0A6YYJ7 113 aa17.82■□□□□ 0.44
CAPNS1-204ENST00000587718 IFITM1P13164 125 aa17.82■□□□□ 0.44
CAPNS1-204ENST00000587718 CDKN2A-AS1Q9UH64 79 aa17.82■□□□□ 0.44
CAPNS1-204ENST00000587718 TRBV20-1A0A075B6N2 111 aa17.8■□□□□ 0.44
CAPNS1-204ENST00000587718 LYRM9A8MSI8 78 aa17.8■□□□□ 0.44
CAPNS1-204ENST00000587718 APOMO95445 188 aa17.8■□□□□ 0.44
CAPNS1-204ENST00000587718 SPINK8P0C7L1 97 aa17.8■□□□□ 0.44
CAPNS1-204ENST00000587718 X6R8D5 127 aa17.8■□□□□ 0.44
CAPNS1-204ENST00000587718 DNAH1Q9P2D7 4330 aa17.79■□□□□ 0.44
CAPNS1-204ENST00000587718 APOC4P55056 127 aa17.79■□□□□ 0.44
CAPNS1-204ENST00000587718 A4D1N5 150 aa17.79■□□□□ 0.44
CAPNS1-204ENST00000587718 MUSTN1Q8IVN3 82 aa17.79■□□□□ 0.44
CAPNS1-204ENST00000587718 PPDPFQ9H3Y8 114 aa17.79■□□□□ 0.44
CAPNS1-204ENST00000587718 MIAQ16674 131 aa17.78■□□□□ 0.44
CAPNS1-204ENST00000587718 TRBV6-8A0A0A6YYG3 113 aa17.77■□□□□ 0.44
CAPNS1-204ENST00000587718 COPS9Q8WXC6 57 aa17.76■□□□□ 0.43
CAPNS1-204ENST00000587718 CIRBPQ14011 172 aaKnown RBP17.75■□□□□ 0.43
CAPNS1-204ENST00000587718 COX6A2Q02221 97 aa17.74■□□□□ 0.43
CAPNS1-204ENST00000587718 SMIM1B2RUZ4 78 aa17.73■□□□□ 0.43
CAPNS1-204ENST00000587718 IGHV3-33P01772 117 aa17.73■□□□□ 0.43
CAPNS1-204ENST00000587718 HERV-K104P63124 156 aa17.73■□□□□ 0.43
CAPNS1-204ENST00000587718 PRO0461Q9UI25 63 aa17.73■□□□□ 0.43
CAPNS1-204ENST00000587718 H3BMG7 143 aa17.72■□□□□ 0.43
CAPNS1-204ENST00000587718 ERG28Q9UKR5 140 aa17.72■□□□□ 0.43
CAPNS1-204ENST00000587718 LOC100131303A0A0U1RQF7 123 aa17.71■□□□□ 0.43
CAPNS1-204ENST00000587718 PRO0255Q9UI72 69 aa17.71■□□□□ 0.43
CAPNS1-204ENST00000587718 F5H768 121 aa17.7■□□□□ 0.42
CAPNS1-204ENST00000587718 TRAV13-1A0A0B4J241 112 aa17.7■□□□□ 0.42
CAPNS1-204ENST00000587718 HYDINQ4G0P3 5121 aa17.69■□□□□ 0.42
CAPNS1-204ENST00000587718 LOC107984156A0A0G2JMH3 177 aa17.68■□□□□ 0.42
CAPNS1-204ENST00000587718 ARL17AQ8IVW1 177 aa17.68■□□□□ 0.42
CAPNS1-204ENST00000587718 ATP6V0E2Q8NHE4 81 aa17.68■□□□□ 0.42
CAPNS1-204ENST00000587718 DEFB130BP0DP73 79 aa17.67■□□□□ 0.42
CAPNS1-204ENST00000587718 DEFB130AP0DP74 79 aa17.67■□□□□ 0.42
CAPNS1-204ENST00000587718 J3QR89 54 aa17.66■□□□□ 0.42
CAPNS1-204ENST00000587718 MIFP14174 115 aa17.66■□□□□ 0.42
CAPNS1-204ENST00000587718 ADAMTSL4-AS1Q5T5F5 129 aa17.66■□□□□ 0.42
CAPNS1-204ENST00000587718 A0A1B0GUV1 79 aa17.66■□□□□ 0.42
CAPNS1-204ENST00000587718 ZNF625Q96I27 306 aaPredicted RBP17.66■□□□□ 0.42
CAPNS1-204ENST00000587718 PLECQ15149 4684 aaKnown RBP17.65■□□□□ 0.42
CAPNS1-204ENST00000587718 TRBV30A0A0K0K1B3 111 aa17.65■□□□□ 0.42
CAPNS1-204ENST00000587718 M0QXV9 152 aa17.65■□□□□ 0.42
CAPNS1-204ENST00000587718 EIF4EBP3O60516 100 aaPredicted RBP17.65■□□□□ 0.42
CAPNS1-204ENST00000587718 PRSS2P07478 247 aa17.65■□□□□ 0.42
CAPNS1-204ENST00000587718 DEFB135Q30KP9 77 aa17.65■□□□□ 0.42
CAPNS1-204ENST00000587718 EPPK1P58107 5090 aaKnown RBP17.65■□□□□ 0.42
CAPNS1-204ENST00000587718 GAGE6Q13070 117 aa17.64■□□□□ 0.41
CAPNS1-204ENST00000587718 SFTA2Q6UW10 78 aa17.64■□□□□ 0.41
CAPNS1-204ENST00000587718 CHCHD5Q9BSY4 110 aa17.64■□□□□ 0.41
CAPNS1-204ENST00000587718 Q9H8V8 135 aa17.64■□□□□ 0.41
CAPNS1-204ENST00000587718 A0A0J9YWU9 116 aa17.63■□□□□ 0.41
CAPNS1-204ENST00000587718 GYPEP15421 78 aa17.63■□□□□ 0.41
CAPNS1-204ENST00000587718 WFDC2Q14508 124 aa17.63■□□□□ 0.41
CAPNS1-204ENST00000587718 PSMB2P49721 201 aa17.62■□□□□ 0.41
CAPNS1-204ENST00000587718 FAM222AQ5U5X8 452 aa17.62■□□□□ 0.41
CAPNS1-204ENST00000587718 LINC01561Q8N1V8 128 aa17.62■□□□□ 0.41
CAPNS1-204ENST00000587718 VPS25Q9BRG1 176 aa17.62■□□□□ 0.41
CAPNS1-204ENST00000587718 TRAV26-1A0A087WT03 109 aa17.61■□□□□ 0.41
CAPNS1-204ENST00000587718 SCGB1C2P0DMR2 95 aa17.61■□□□□ 0.41
CAPNS1-204ENST00000587718 RNF151Q2KHN1 245 aa17.61■□□□□ 0.41
CAPNS1-204ENST00000587718 TCL1BO95988 128 aa17.59■□□□□ 0.41
CAPNS1-204ENST00000587718 TEX48A0A1B0GUV7 120 aa17.58■□□□□ 0.41
CAPNS1-204ENST00000587718 LINC01600Q96MT4 127 aa17.58■□□□□ 0.41
CAPNS1-204ENST00000587718 IGHV3OR16-9A0A0B4J2B5 98 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms