RNA–Protein interactions for RNA: ENST00000580621.5

KRT16P3-203, Transcript of keratin 16 pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene KRT16P3, Length 1,939 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT16P3-203ENST00000580621 FAM19A3Q7Z5A8 133 aa13.78□□□□□ -0.2
KRT16P3-203ENST00000580621 SPATA25Q9BR10 227 aa13.78□□□□□ -0.2
KRT16P3-203ENST00000580621 F5H768 121 aa13.78□□□□□ -0.2
KRT16P3-203ENST00000580621 PRO0461Q9UI25 63 aa13.78□□□□□ -0.2
KRT16P3-203ENST00000580621 ANK2Q01484 3957 aa13.78□□□□□ -0.2
KRT16P3-203ENST00000580621 IGLV5-45A0A087WSX0 123 aa13.77□□□□□ -0.21
KRT16P3-203ENST00000580621 LINC00242Q5T6M2 205 aa13.77□□□□□ -0.21
KRT16P3-203ENST00000580621 SCGB1D4Q6XE38 83 aa13.77□□□□□ -0.21
KRT16P3-203ENST00000580621 TRAV26-1A0A087WT03 109 aa13.76□□□□□ -0.21
KRT16P3-203ENST00000580621 A0A096LPF7 62 aa13.76□□□□□ -0.21
KRT16P3-203ENST00000580621 TRAV13-1A0A0B4J241 112 aa13.76□□□□□ -0.21
KRT16P3-203ENST00000580621 IGHV3-30-3P0DP02 117 aa13.76□□□□□ -0.21
KRT16P3-203ENST00000580621 HERVK_113P63121 156 aa13.76□□□□□ -0.21
KRT16P3-203ENST00000580621 TRAV8-3A0A0A6YYJ7 113 aa13.75□□□□□ -0.21
KRT16P3-203ENST00000580621 IGHV1-58A0A0C4DH39 117 aa13.75□□□□□ -0.21
KRT16P3-203ENST00000580621 HTN3P15516 51 aa13.75□□□□□ -0.21
KRT16P3-203ENST00000580621 COX6A2Q02221 97 aa13.75□□□□□ -0.21
KRT16P3-203ENST00000580621 ETDBQ3ZM63 59 aa13.75□□□□□ -0.21
KRT16P3-203ENST00000580621 CDKN2A-AS1Q9UH64 79 aa13.75□□□□□ -0.21
KRT16P3-203ENST00000580621 NOTCH1P46531 2555 aa13.74□□□□□ -0.21
KRT16P3-203ENST00000580621 TMEM238LA0A1B0GVL6 79 aa13.74□□□□□ -0.21
KRT16P3-203ENST00000580621 A6NJY4 79 aa13.74□□□□□ -0.21
KRT16P3-203ENST00000580621 SPINK8P0C7L1 97 aa13.74□□□□□ -0.21
KRT16P3-203ENST00000580621 SH2D6Q7Z4S9 175 aa13.74□□□□□ -0.21
KRT16P3-203ENST00000580621 IGLV4-60A0A075B6I1 120 aa13.73□□□□□ -0.21
KRT16P3-203ENST00000580621 C11orf68Q9H3H3 251 aaKnown RBP13.72□□□□□ -0.21
KRT16P3-203ENST00000580621 PGPEP1Q9NXJ5 209 aa13.7□□□□□ -0.22
KRT16P3-203ENST00000580621 MRPL23Q16540 153 aaKnown RBP13.7□□□□□ -0.22
KRT16P3-203ENST00000580621 ICOSQ9Y6W8 199 aa13.69□□□□□ -0.22
KRT16P3-203ENST00000580621 TMEM262E9PQX1 116 aa13.68□□□□□ -0.22
KRT16P3-203ENST00000580621 PRB2P02812 416 aaPredicted RBP13.68□□□□□ -0.22
KRT16P3-203ENST00000580621 A0A1B0GUV1 79 aa13.68□□□□□ -0.22
KRT16P3-203ENST00000580621 SRSF9Q13242 221 aaKnown RBP eCLIP13.68□□□□□ -0.22
KRT16P3-203ENST00000580621 C10orf126Q8N4M7 172 aa13.68□□□□□ -0.22
KRT16P3-203ENST00000580621 APOMO95445 188 aa13.67□□□□□ -0.22
KRT16P3-203ENST00000580621 LYRM7Q5U5X0 104 aa13.67□□□□□ -0.22
KRT16P3-203ENST00000580621 IGKV3OR2-268A0A0C4DH90 116 aa13.66□□□□□ -0.22
KRT16P3-203ENST00000580621 IGLV5-39A0A0G2JS06 123 aa13.66□□□□□ -0.22
KRT16P3-203ENST00000580621 MDFIQ99750 246 aa13.66□□□□□ -0.22
KRT16P3-203ENST00000580621 NDUFA12Q9UI09 145 aa13.66□□□□□ -0.22
KRT16P3-203ENST00000580621 A0A1B0GV72 72 aa13.66□□□□□ -0.22
KRT16P3-203ENST00000580621 ZFAND6Q6FIF0 208 aa13.66□□□□□ -0.22
KRT16P3-203ENST00000580621 NBEAL1Q6ZS30 2694 aa13.66□□□□□ -0.22
KRT16P3-203ENST00000580621 A0A0J9YWU9 116 aa13.65□□□□□ -0.22
KRT16P3-203ENST00000580621 A0A0J9YXY3 114 aa13.65□□□□□ -0.22
KRT16P3-203ENST00000580621 SMIM1B2RUZ4 78 aa13.65□□□□□ -0.22
KRT16P3-203ENST00000580621 FOXI1Q12951 378 aa13.65□□□□□ -0.22
KRT16P3-203ENST00000580621 MTURNQ8N3F0 131 aa13.65□□□□□ -0.22
KRT16P3-203ENST00000580621 TENM3Q9P273 2699 aa13.65□□□□□ -0.22
KRT16P3-203ENST00000580621 K7EIL1 84 aa13.64□□□□□ -0.23
KRT16P3-203ENST00000580621 TSPAN13O95857 204 aa13.64□□□□□ -0.23
KRT16P3-203ENST00000580621 SMCPP49901 116 aaPredicted RBP13.63□□□□□ -0.23
KRT16P3-203ENST00000580621 KPRPQ5T749 579 aaPredicted RBP13.63□□□□□ -0.23
KRT16P3-203ENST00000580621 Q6ZTC4 211 aa13.63□□□□□ -0.23
KRT16P3-203ENST00000580621 IGHV3-30P01768 117 aa13.62□□□□□ -0.23
KRT16P3-203ENST00000580621 IGHV3-30-5P0DP03 117 aa13.62□□□□□ -0.23
KRT16P3-203ENST00000580621 PSMB2P49721 201 aa13.62□□□□□ -0.23
KRT16P3-203ENST00000580621 MGAM2Q2M2H8 2515 aa13.61□□□□□ -0.23
KRT16P3-203ENST00000580621 LINC00959A0A1B0GUT2 108 aa13.61□□□□□ -0.23
KRT16P3-203ENST00000580621 LELP1Q5T871 98 aa13.61□□□□□ -0.23
KRT16P3-203ENST00000580621 LOC107984156A0A0G2JMH3 177 aa13.6□□□□□ -0.23
KRT16P3-203ENST00000580621 H3BNG1 76 aa13.6□□□□□ -0.23
KRT16P3-203ENST00000580621 NDUFA1O15239 70 aa13.6□□□□□ -0.23
KRT16P3-203ENST00000580621 ARL17AQ8IVW1 177 aa13.6□□□□□ -0.23
KRT16P3-203ENST00000580621 TRBV20-1A0A075B6N2 111 aa13.6□□□□□ -0.23
KRT16P3-203ENST00000580621 NANOS2P60321 138 aaKnown RBP13.59□□□□□ -0.23
KRT16P3-203ENST00000580621 DEFB121Q5J5C9 76 aa13.59□□□□□ -0.23
KRT16P3-203ENST00000580621 LITAFQ99732 161 aa13.59□□□□□ -0.23
KRT16P3-203ENST00000580621 IGHV3OR16-9A0A0B4J2B5 98 aa13.58□□□□□ -0.23
KRT16P3-203ENST00000580621 C11orf45Q8TAV5 145 aa13.58□□□□□ -0.23
KRT16P3-203ENST00000580621 TM2D3Q9BRN9 247 aa13.58□□□□□ -0.23
KRT16P3-203ENST00000580621 SS18Q15532 418 aa13.57□□□□□ -0.24
KRT16P3-203ENST00000580621 LYPD5Q6UWN5 251 aa13.57□□□□□ -0.24
KRT16P3-203ENST00000580621 PPDPFLQ8WWR9 84 aa13.57□□□□□ -0.24
KRT16P3-203ENST00000580621 CLPSL2Q6UWE3 100 aa13.56□□□□□ -0.24
KRT16P3-203ENST00000580621 Q8N3U1 123 aa13.56□□□□□ -0.24
KRT16P3-203ENST00000580621 CDIP1Q9H305 208 aa13.56□□□□□ -0.24
KRT16P3-203ENST00000580621 TEN1Q86WV5 123 aa13.56□□□□□ -0.24
KRT16P3-203ENST00000580621 MRAPQ8TCY5 172 aa13.56□□□□□ -0.24
KRT16P3-203ENST00000580621 Q9H8V8 135 aa13.56□□□□□ -0.24
KRT16P3-203ENST00000580621 A0A087WZ39 114 aa13.55□□□□□ -0.24
KRT16P3-203ENST00000580621 CKS1BP61024 79 aa13.55□□□□□ -0.24
KRT16P3-203ENST00000580621 LINC00269Q8N2A0 174 aa13.55□□□□□ -0.24
KRT16P3-203ENST00000580621 TIMM17BO60830 172 aa13.54□□□□□ -0.24
KRT16P3-203ENST00000580621 ANGP03950 147 aaKnown RBP13.54□□□□□ -0.24
KRT16P3-203ENST00000580621 CFC1BP0CG36 223 aa13.54□□□□□ -0.24
KRT16P3-203ENST00000580621 CFC1P0CG37 223 aa13.54□□□□□ -0.24
KRT16P3-203ENST00000580621 ADAMTSL4-AS1Q5T5F5 129 aa13.54□□□□□ -0.24
KRT16P3-203ENST00000580621 MUSTN1Q8IVN3 82 aa13.54□□□□□ -0.24
KRT16P3-203ENST00000580621 SPANXDQ9BXN6 97 aa13.54□□□□□ -0.24
KRT16P3-203ENST00000580621 SPANXCQ9NY87 97 aa13.54□□□□□ -0.24
KRT16P3-203ENST00000580621 DEFB131BA0A096LNP1 70 aa13.53□□□□□ -0.24
KRT16P3-203ENST00000580621 TCL1BO95988 128 aa13.53□□□□□ -0.24
KRT16P3-203ENST00000580621 XCL1P47992 114 aa13.53□□□□□ -0.24
KRT16P3-203ENST00000580621 C5orf38Q86SI9 138 aa13.53□□□□□ -0.24
KRT16P3-203ENST00000580621 COX7B2Q8TF08 81 aa13.53□□□□□ -0.24
KRT16P3-203ENST00000580621 ZNF625Q96I27 306 aaPredicted RBP13.53□□□□□ -0.24
KRT16P3-203ENST00000580621 PRO1854Q9UHT4 67 aa13.53□□□□□ -0.24
KRT16P3-203ENST00000580621 SFTA2Q6UW10 78 aa13.52□□□□□ -0.24
KRT16P3-203ENST00000580621 REG3AQ06141 175 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms