RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 OTOGQ6ZRI0 2925 aa7.51□□□□□ -1.21
TOP3A-209ENST00000580095 BEAN1Q3B7T3 259 aa7.51□□□□□ -1.21
TOP3A-209ENST00000580095 LINC01006Q8NI28 216 aa7.51□□□□□ -1.21
TOP3A-209ENST00000580095 TENM1Q9UKZ4 2725 aa7.51□□□□□ -1.21
TOP3A-209ENST00000580095 NTM-AS1Q6ZSK4 140 aa7.51□□□□□ -1.21
TOP3A-209ENST00000580095 IGKV3OR2-268A0A0C4DH90 116 aa7.5□□□□□ -1.21
TOP3A-209ENST00000580095 CHCHD5Q9BSY4 110 aa7.5□□□□□ -1.21
TOP3A-209ENST00000580095 TINCRA0A1B0GVN0 87 aa7.5□□□□□ -1.21
TOP3A-209ENST00000580095 GIG44P09565 113 aaPredicted RBP7.5□□□□□ -1.21
TOP3A-209ENST00000580095 ANKRD29Q8N6D5 301 aa7.5□□□□□ -1.21
TOP3A-209ENST00000580095 KLK5Q9Y337 293 aaPredicted RBP7.5□□□□□ -1.21
TOP3A-209ENST00000580095 OR13C6PQ8NH95 151 aa7.49□□□□□ -1.21
TOP3A-209ENST00000580095 ANK3Q12955 4377 aaKnown RBP7.49□□□□□ -1.21
TOP3A-209ENST00000580095 TRGV2A0A075B6R0 118 aa7.48□□□□□ -1.21
TOP3A-209ENST00000580095 A0A1B0GX51 115 aa7.48□□□□□ -1.21
TOP3A-209ENST00000580095 KRTAP1-1Q07627 177 aa7.48□□□□□ -1.21
TOP3A-209ENST00000580095 SBSPONQ8IVN8 264 aa7.48□□□□□ -1.21
TOP3A-209ENST00000580095 TRIAP1O43715 76 aa7.48□□□□□ -1.21
TOP3A-209ENST00000580095 LINC00242Q5T6M2 205 aa7.48□□□□□ -1.21
TOP3A-209ENST00000580095 MRAPQ8TCY5 172 aa7.48□□□□□ -1.21
TOP3A-209ENST00000580095 K7EQD1 137 aa7.47□□□□□ -1.21
TOP3A-209ENST00000580095 HERVK_113P63121 156 aa7.47□□□□□ -1.21
TOP3A-209ENST00000580095 Q9H8V8 135 aa7.47□□□□□ -1.21
TOP3A-209ENST00000580095 ATRQ13535 2644 aa7.47□□□□□ -1.21
TOP3A-209ENST00000580095 SLC25A20O43772 301 aa7.47□□□□□ -1.21
TOP3A-209ENST00000580095 RPL36AP83881 106 aaKnown RBP7.47□□□□□ -1.21
TOP3A-209ENST00000580095 LYRM7Q5U5X0 104 aa7.47□□□□□ -1.21
TOP3A-209ENST00000580095 CLEC2BQ92478 149 aa7.47□□□□□ -1.21
TOP3A-209ENST00000580095 RPL36ALQ969Q0 106 aaKnown RBP7.47□□□□□ -1.21
TOP3A-209ENST00000580095 A0A0B4J2C4 111 aa7.46□□□□□ -1.21
TOP3A-209ENST00000580095 TMEM86BQ8N661 226 aa7.46□□□□□ -1.21
TOP3A-209ENST00000580095 MIAQ16674 131 aa7.46□□□□□ -1.22
TOP3A-209ENST00000580095 PIK3CD-AS1Q5SR53 167 aa7.46□□□□□ -1.22
TOP3A-209ENST00000580095 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.45□□□□□ -1.22
TOP3A-209ENST00000580095 PLAC8L1A1L4L8 177 aa7.45□□□□□ -1.22
TOP3A-209ENST00000580095 C4orf26Q17RF5 130 aa7.45□□□□□ -1.22
TOP3A-209ENST00000580095 C15orf53Q8NAA6 179 aa7.45□□□□□ -1.22
TOP3A-209ENST00000580095 IL17DQ8TAD2 202 aa7.45□□□□□ -1.22
TOP3A-209ENST00000580095 DEFB130BP0DP73 79 aa7.44□□□□□ -1.22
TOP3A-209ENST00000580095 DEFB130AP0DP74 79 aa7.44□□□□□ -1.22
TOP3A-209ENST00000580095 HRCT1Q6UXD1 115 aa7.44□□□□□ -1.22
TOP3A-209ENST00000580095 C9orf153Q5TBE3 101 aa7.44□□□□□ -1.22
TOP3A-209ENST00000580095 NTN5Q8WTR8 489 aaPredicted RBP7.44□□□□□ -1.22
TOP3A-209ENST00000580095 TEX49A0A1B0GTD5 131 aa7.43□□□□□ -1.22
TOP3A-209ENST00000580095 RPL13AP40429 203 aaKnown RBP7.43□□□□□ -1.22
TOP3A-209ENST00000580095 C19orf73Q9NVV2 129 aa7.43□□□□□ -1.22
TOP3A-209ENST00000580095 ICOSQ9Y6W8 199 aa7.43□□□□□ -1.22
TOP3A-209ENST00000580095 TRGV4A0A0C4DH28 118 aa7.43□□□□□ -1.22
TOP3A-209ENST00000580095 SMIM1B2RUZ4 78 aa7.43□□□□□ -1.22
TOP3A-209ENST00000580095 RPS28P62857 69 aaKnown RBP7.43□□□□□ -1.22
TOP3A-209ENST00000580095 LINC01620Q4KN68 170 aa7.43□□□□□ -1.22
TOP3A-209ENST00000580095 SPATA3Q8NHX4 192 aa7.43□□□□□ -1.22
TOP3A-209ENST00000580095 TRRAPQ9Y4A5 3859 aa7.43□□□□□ -1.22
TOP3A-209ENST00000580095 UBE2L6O14933 153 aa7.42□□□□□ -1.22
TOP3A-209ENST00000580095 OXTP01178 125 aa7.42□□□□□ -1.22
TOP3A-209ENST00000580095 PRIMA1Q86XR5 153 aa7.42□□□□□ -1.22
TOP3A-209ENST00000580095 SPANXDQ9BXN6 97 aa7.42□□□□□ -1.22
TOP3A-209ENST00000580095 CDC42SE2Q9NRR3 84 aa7.42□□□□□ -1.22
TOP3A-209ENST00000580095 SPANXCQ9NY87 97 aa7.42□□□□□ -1.22
TOP3A-209ENST00000580095 IGLV1-51P01701 117 aa7.42□□□□□ -1.22
TOP3A-209ENST00000580095 SEC61GP60059 68 aa7.42□□□□□ -1.22
TOP3A-209ENST00000580095 Q5XG85 94 aa7.42□□□□□ -1.22
TOP3A-209ENST00000580095 TOMM7Q9P0U1 55 aa7.42□□□□□ -1.22
TOP3A-209ENST00000580095 A0A096LPF7 62 aa7.41□□□□□ -1.22
TOP3A-209ENST00000580095 NDUFA1O15239 70 aa7.41□□□□□ -1.22
TOP3A-209ENST00000580095 TIRAPP58753 221 aa7.41□□□□□ -1.22
TOP3A-209ENST00000580095 SOSTDC1Q6X4U4 206 aa7.41□□□□□ -1.22
TOP3A-209ENST00000580095 IGLV5-45A0A087WSX0 123 aa7.41□□□□□ -1.22
TOP3A-209ENST00000580095 RNASE1P07998 156 aaKnown RBP7.41□□□□□ -1.22
TOP3A-209ENST00000580095 DAZ2Q13117 558 aaKnown RBP7.41□□□□□ -1.22
TOP3A-209ENST00000580095 ATXN8Q156A1 80 aa7.41□□□□□ -1.22
TOP3A-209ENST00000580095 DAZ4Q86SG3 579 aaKnown RBP7.41□□□□□ -1.22
TOP3A-209ENST00000580095 C3orf22Q8N5N4 141 aa7.41□□□□□ -1.22
TOP3A-209ENST00000580095 DAZ3Q9NR90 486 aaKnown RBP7.41□□□□□ -1.22
TOP3A-209ENST00000580095 IGLV4-60A0A075B6I1 120 aa7.41□□□□□ -1.22
TOP3A-209ENST00000580095 FAM236AA0A1B0GUQ0 79 aa7.41□□□□□ -1.22
TOP3A-209ENST00000580095 FAM236BA0A1B0GV22 79 aa7.41□□□□□ -1.22
TOP3A-209ENST00000580095 KRTAP10-3P60369 221 aa7.41□□□□□ -1.22
TOP3A-209ENST00000580095 LINC00308Q8TCZ7 52 aa7.41□□□□□ -1.22
TOP3A-209ENST00000580095 TMEM243Q9BU79 118 aa7.41□□□□□ -1.22
TOP3A-209ENST00000580095 DEFB4AO15263 64 aa7.4□□□□□ -1.22
TOP3A-209ENST00000580095 CSNK1G2-AS1Q8NCQ2 148 aa7.4□□□□□ -1.22
TOP3A-209ENST00000580095 IGLV5-39A0A0G2JS06 123 aa7.4□□□□□ -1.23
TOP3A-209ENST00000580095 TRBV10-1A0A0K0K1A3 114 aa7.4□□□□□ -1.23
TOP3A-209ENST00000580095 TRBV30A0A0K0K1B3 111 aa7.4□□□□□ -1.23
TOP3A-209ENST00000580095 C16orf74Q96GX8 76 aa7.39□□□□□ -1.23
TOP3A-209ENST00000580095 C11orf68Q9H3H3 251 aaKnown RBP7.39□□□□□ -1.23
TOP3A-209ENST00000580095 NSD1Q96L73 2696 aaPredicted RBP7.39□□□□□ -1.23
TOP3A-209ENST00000580095 TEP1Q99973 2627 aaKnown RBP7.39□□□□□ -1.23
TOP3A-209ENST00000580095 H7C423 109 aa7.38□□□□□ -1.23
TOP3A-209ENST00000580095 CIRBPQ14011 172 aaKnown RBP7.38□□□□□ -1.23
TOP3A-209ENST00000580095 CLPSL2Q6UWE3 100 aa7.38□□□□□ -1.23
TOP3A-209ENST00000580095 C2orf82Q6UX34 121 aa7.38□□□□□ -1.23
TOP3A-209ENST00000580095 LINC00482Q8N8I6 264 aa7.38□□□□□ -1.23
TOP3A-209ENST00000580095 LINC00526Q96FQ7 95 aa7.38□□□□□ -1.23
TOP3A-209ENST00000580095 FHL2Q14192 279 aa7.38□□□□□ -1.23
TOP3A-209ENST00000580095 C5orf38Q86SI9 138 aa7.38□□□□□ -1.23
TOP3A-209ENST00000580095 PF4P02776 101 aa7.37□□□□□ -1.23
TOP3A-209ENST00000580095 HIVEP1P15822 2718 aa7.37□□□□□ -1.23
TOP3A-209ENST00000580095 TRAV8-4A0A0B4J246 113 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms