RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 UBE2L6O14933 153 aa12.41□□□□□ -0.42
ERBB2-205ENST00000578199 DEFB130BP0DP73 79 aa12.41□□□□□ -0.42
ERBB2-205ENST00000578199 DEFB130AP0DP74 79 aa12.41□□□□□ -0.42
ERBB2-205ENST00000578199 TRBV20-1A0A075B6N2 111 aa12.4□□□□□ -0.42
ERBB2-205ENST00000578199 IGKV3OR2-268A0A0C4DH90 116 aa12.4□□□□□ -0.42
ERBB2-205ENST00000578199 SMIM1B2RUZ4 78 aa12.4□□□□□ -0.42
ERBB2-205ENST00000578199 FHL2Q14192 279 aa12.4□□□□□ -0.42
ERBB2-205ENST00000578199 TMEM243Q9BU79 118 aa12.4□□□□□ -0.42
ERBB2-205ENST00000578199 CSDC2Q9Y534 153 aaKnown RBP12.4□□□□□ -0.42
ERBB2-205ENST00000578199 NDUFA1O15239 70 aa12.39□□□□□ -0.43
ERBB2-205ENST00000578199 FOXI1Q12951 378 aa12.39□□□□□ -0.43
ERBB2-205ENST00000578199 GAGE6Q13070 117 aa12.39□□□□□ -0.43
ERBB2-205ENST00000578199 LINC00482Q8N8I6 264 aa12.39□□□□□ -0.43
ERBB2-205ENST00000578199 TRBV6-4A0A1B0GX49 114 aa12.39□□□□□ -0.43
ERBB2-205ENST00000578199 CRLF1O75462 422 aa12.39□□□□□ -0.43
ERBB2-205ENST00000578199 TRRAPQ9Y4A5 3859 aa12.39□□□□□ -0.43
ERBB2-205ENST00000578199 IGLV5-39A0A0G2JS06 123 aa12.38□□□□□ -0.43
ERBB2-205ENST00000578199 INAFM1C9JVW0 142 aa12.38□□□□□ -0.43
ERBB2-205ENST00000578199 TRIAP1O43715 76 aa12.38□□□□□ -0.43
ERBB2-205ENST00000578199 CDIP1Q9H305 208 aa12.38□□□□□ -0.43
ERBB2-205ENST00000578199 C9JAW5 83 aa12.37□□□□□ -0.43
ERBB2-205ENST00000578199 CARD19Q96LW7 228 aa12.36□□□□□ -0.43
ERBB2-205ENST00000578199 IGLV4-60A0A075B6I1 120 aa12.36□□□□□ -0.43
ERBB2-205ENST00000578199 F5H768 121 aa12.36□□□□□ -0.43
ERBB2-205ENST00000578199 NSD1Q96L73 2696 aaPredicted RBP12.35□□□□□ -0.43
ERBB2-205ENST00000578199 FAM19A3Q7Z5A8 133 aa12.35□□□□□ -0.43
ERBB2-205ENST00000578199 RNF183Q96D59 192 aa12.35□□□□□ -0.43
ERBB2-205ENST00000578199 SS18L2Q9UHA2 77 aa12.35□□□□□ -0.43
ERBB2-205ENST00000578199 MT-ATP8P03928 68 aa12.34□□□□□ -0.43
ERBB2-205ENST00000578199 SLC25A20O43772 301 aa12.34□□□□□ -0.43
ERBB2-205ENST00000578199 ANKRD29Q8N6D5 301 aa12.34□□□□□ -0.43
ERBB2-205ENST00000578199 TEN1Q86WV5 123 aa12.33□□□□□ -0.44
ERBB2-205ENST00000578199 PRIMA1Q86XR5 153 aa12.33□□□□□ -0.44
ERBB2-205ENST00000578199 CHCHD5Q9BSY4 110 aa12.33□□□□□ -0.44
ERBB2-205ENST00000578199 ICOSQ9Y6W8 199 aa12.33□□□□□ -0.44
ERBB2-205ENST00000578199 TRBV6-8A0A0A6YYG3 113 aa12.33□□□□□ -0.44
ERBB2-205ENST00000578199 TIMM17BO60830 172 aa12.33□□□□□ -0.44
ERBB2-205ENST00000578199 CIRBPQ14011 172 aaKnown RBP12.33□□□□□ -0.44
ERBB2-205ENST00000578199 TRBV30A0A0K0K1B3 111 aa12.32□□□□□ -0.44
ERBB2-205ENST00000578199 ATP6V0E2Q8NHE4 81 aa12.32□□□□□ -0.44
ERBB2-205ENST00000578199 LINC00308Q8TCZ7 52 aa12.32□□□□□ -0.44
ERBB2-205ENST00000578199 DEFB4AO15263 64 aa12.32□□□□□ -0.44
ERBB2-205ENST00000578199 SOSTDC1Q6X4U4 206 aa12.32□□□□□ -0.44
ERBB2-205ENST00000578199 RPL13AP40429 203 aaKnown RBP12.31□□□□□ -0.44
ERBB2-205ENST00000578199 MEIG1Q5JSS6 88 aa12.31□□□□□ -0.44
ERBB2-205ENST00000578199 X6R8D5 127 aa12.31□□□□□ -0.44
ERBB2-205ENST00000578199 A0A096LPF7 62 aa12.31□□□□□ -0.44
ERBB2-205ENST00000578199 XGP55808 180 aa12.31□□□□□ -0.44
ERBB2-205ENST00000578199 CLEC2BQ92478 149 aa12.31□□□□□ -0.44
ERBB2-205ENST00000578199 HIVEP1P15822 2718 aa12.3□□□□□ -0.44
ERBB2-205ENST00000578199 ATRQ13535 2644 aa12.3□□□□□ -0.44
ERBB2-205ENST00000578199 ATXN8Q156A1 80 aa12.3□□□□□ -0.44
ERBB2-205ENST00000578199 IFITM1P13164 125 aa12.29□□□□□ -0.44
ERBB2-205ENST00000578199 LINC01620Q4KN68 170 aa12.29□□□□□ -0.44
ERBB2-205ENST00000578199 TOMM7Q9P0U1 55 aa12.29□□□□□ -0.44
ERBB2-205ENST00000578199 PPDPFLQ8WWR9 84 aa12.29□□□□□ -0.44
ERBB2-205ENST00000578199 GYPEP15421 78 aa12.28□□□□□ -0.44
ERBB2-205ENST00000578199 SHISA2Q6UWI4 295 aa12.28□□□□□ -0.44
ERBB2-205ENST00000578199 KIR2DL5BQ8NHK3 375 aa12.27□□□□□ -0.45
ERBB2-205ENST00000578199 H7C423 109 aa12.27□□□□□ -0.45
ERBB2-205ENST00000578199 ANAPC13Q9BS18 74 aa12.27□□□□□ -0.45
ERBB2-205ENST00000578199 DEFB135Q30KP9 77 aa12.26□□□□□ -0.45
ERBB2-205ENST00000578199 TMEM262E9PQX1 116 aa12.25□□□□□ -0.45
ERBB2-205ENST00000578199 FAM222AQ5U5X8 452 aa12.25□□□□□ -0.45
ERBB2-205ENST00000578199 C5orf38Q86SI9 138 aa12.25□□□□□ -0.45
ERBB2-205ENST00000578199 TEP1Q99973 2627 aaKnown RBP12.24□□□□□ -0.45
ERBB2-205ENST00000578199 LINC00612Q8N6U2 182 aa12.24□□□□□ -0.45
ERBB2-205ENST00000578199 COX7B2Q8TF08 81 aa12.24□□□□□ -0.45
ERBB2-205ENST00000578199 NTN5Q8WTR8 489 aaPredicted RBP12.24□□□□□ -0.45
ERBB2-205ENST00000578199 COX6CP09669 75 aa12.24□□□□□ -0.45
ERBB2-205ENST00000578199 CLPSL2Q6UWE3 100 aa12.24□□□□□ -0.45
ERBB2-205ENST00000578199 B5MCH6 92 aa12.23□□□□□ -0.45
ERBB2-205ENST00000578199 C9orf66Q5T8R8 295 aa12.23□□□□□ -0.45
ERBB2-205ENST00000578199 IGHV3OR16-9A0A0B4J2B5 98 aa12.22□□□□□ -0.45
ERBB2-205ENST00000578199 TEX49A0A1B0GTD5 131 aa12.22□□□□□ -0.45
ERBB2-205ENST00000578199 TRBV10-2A0A0K0K1G8 114 aa12.21□□□□□ -0.45
ERBB2-205ENST00000578199 HERV-K104P63124 156 aa12.21□□□□□ -0.45
ERBB2-205ENST00000578199 C11orf68Q9H3H3 251 aaKnown RBP12.2□□□□□ -0.46
ERBB2-205ENST00000578199 LINC00959A0A1B0GUT2 108 aa12.2□□□□□ -0.46
ERBB2-205ENST00000578199 MIR7-3HGQ8N6C7 128 aa12.2□□□□□ -0.46
ERBB2-205ENST00000578199 PRO0255Q9UI72 69 aa12.2□□□□□ -0.46
ERBB2-205ENST00000578199 XCL1P47992 114 aa12.19□□□□□ -0.46
ERBB2-205ENST00000578199 C2orf82Q6UX34 121 aa12.19□□□□□ -0.46
ERBB2-205ENST00000578199 LST1O00453 97 aa12.18□□□□□ -0.46
ERBB2-205ENST00000578199 NHLRC4P0CG21 123 aaPredicted RBP12.18□□□□□ -0.46
ERBB2-205ENST00000578199 Q8N3U1 123 aa12.18□□□□□ -0.46
ERBB2-205ENST00000578199 SMIM9A6NGZ8 99 aa12.18□□□□□ -0.46
ERBB2-205ENST00000578199 PAX4O43316 350 aa12.18□□□□□ -0.46
ERBB2-205ENST00000578199 A0A087WZ39 114 aa12.17□□□□□ -0.46
ERBB2-205ENST00000578199 IGHV4-28A0A0C4DH34 117 aa12.17□□□□□ -0.46
ERBB2-205ENST00000578199 PFN2P35080 140 aa12.17□□□□□ -0.46
ERBB2-205ENST00000578199 LINC00158P58513 81 aa12.17□□□□□ -0.46
ERBB2-205ENST00000578199 M0QXV9 152 aa12.16□□□□□ -0.46
ERBB2-205ENST00000578199 CELA1Q9UNI1 258 aa12.16□□□□□ -0.46
ERBB2-205ENST00000578199 CITED1Q99966 193 aa12.15□□□□□ -0.46
ERBB2-205ENST00000578199 COPS9Q8WXC6 57 aa12.14□□□□□ -0.47
ERBB2-205ENST00000578199 LYRM9A8MSI8 78 aa12.13□□□□□ -0.47
ERBB2-205ENST00000578199 SMIM20Q8N5G0 67 aa12.13□□□□□ -0.47
ERBB2-205ENST00000578199 IGKV2-28A0A075B6P5 120 aa12.12□□□□□ -0.47
ERBB2-205ENST00000578199 IGKV2D-28P01615 120 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms