RNA–Protein interactions for RNA: ENST00000577967.1

NF1-218, Transcript of neurofibromin 1, humanhuman

Gene NF1, Length 5,799 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-218ENST00000577967 Q9UF83 564 aa3.28□□□□□ -1.88
NF1-218ENST00000577967 SPTBN1Q01082 2364 aaKnown RBP3.27□□□□□ -1.89
NF1-218ENST00000577967 TEX49A0A1B0GTD5 131 aa3.27□□□□□ -1.89
NF1-218ENST00000577967 SMIM11BQ8TCY0 68 aa3.27□□□□□ -1.89
NF1-218ENST00000577967 GVINP1Q7Z2Y8 2422 aa3.27□□□□□ -1.89
NF1-218ENST00000577967 RANBP2P49792 3224 aaKnown RBP3.27□□□□□ -1.89
NF1-218ENST00000577967 TRAV23DV6A0A075B6W5 121 aa3.27□□□□□ -1.89
NF1-218ENST00000577967 CYSRT1A8MQ03 144 aa3.27□□□□□ -1.89
NF1-218ENST00000577967 TMEM256-PLSCR3K7ERE1 68 aa3.27□□□□□ -1.89
NF1-218ENST00000577967 PRR3P79522 188 aaKnown RBP3.27□□□□□ -1.89
NF1-218ENST00000577967 Q8IZM0 81 aa3.27□□□□□ -1.89
NF1-218ENST00000577967 B9D2Q9BPU9 175 aa3.27□□□□□ -1.89
NF1-218ENST00000577967 WDR87Q6ZQQ6 2873 aa3.27□□□□□ -1.89
NF1-218ENST00000577967 UNQ6190/PRO20217Q6UXQ8 127 aa3.27□□□□□ -1.89
NF1-218ENST00000577967 TRBV30A0A0K0K1B3 111 aa3.27□□□□□ -1.89
NF1-218ENST00000577967 X6R8D5 127 aa3.27□□□□□ -1.89
NF1-218ENST00000577967 A0A087WZ39 114 aa3.27□□□□□ -1.89
NF1-218ENST00000577967 NDUFS5O43920 106 aa3.27□□□□□ -1.89
NF1-218ENST00000577967 SBSPONQ8IVN8 264 aa3.27□□□□□ -1.89
NF1-218ENST00000577967 RBM3P98179 157 aaKnown RBP3.26□□□□□ -1.89
NF1-218ENST00000577967 NTM-AS1Q6ZSK4 140 aa3.26□□□□□ -1.89
NF1-218ENST00000577967 PLCE1Q9P212 2302 aa3.26□□□□□ -1.89
NF1-218ENST00000577967 NUPR2A6NF83 97 aa3.26□□□□□ -1.89
NF1-218ENST00000577967 ACYP1P07311 99 aa3.26□□□□□ -1.89
NF1-218ENST00000577967 COX17Q14061 63 aa3.26□□□□□ -1.89
NF1-218ENST00000577967 DSCAML1Q8TD84 2053 aa3.26□□□□□ -1.89
NF1-218ENST00000577967 ABCA1O95477 2261 aa3.26□□□□□ -1.89
NF1-218ENST00000577967 LOC107984640A0A0U1RRK4 108 aa3.26□□□□□ -1.89
NF1-218ENST00000577967 KRTAP10-11P60412 298 aa3.26□□□□□ -1.89
NF1-218ENST00000577967 Q8N3U1 123 aa3.26□□□□□ -1.89
NF1-218ENST00000577967 HIGD2AQ9BW72 106 aa3.26□□□□□ -1.89
NF1-218ENST00000577967 FUSP35637 526 aaKnown RBP eCLIP3.26□□□□□ -1.89
NF1-218ENST00000577967 NACAE9PAV3 2078 aa3.26□□□□□ -1.89
NF1-218ENST00000577967 TNCP24821 2201 aa3.26□□□□□ -1.89
NF1-218ENST00000577967 H3BT86 120 aa3.25□□□□□ -1.89
NF1-218ENST00000577967 C6orf99Q4VX62 202 aa3.25□□□□□ -1.89
NF1-218ENST00000577967 H3BQ85 93 aa3.25□□□□□ -1.89
NF1-218ENST00000577967 M0R378 163 aa3.25□□□□□ -1.89
NF1-218ENST00000577967 LRCOL1A6NCL2 159 aa3.25□□□□□ -1.89
NF1-218ENST00000577967 JMJD7-PLA2G4BH0Y9G9 81 aa3.25□□□□□ -1.89
NF1-218ENST00000577967 KRTAP1-1Q07627 177 aa3.25□□□□□ -1.89
NF1-218ENST00000577967 CSDC2Q9Y534 153 aaKnown RBP3.25□□□□□ -1.89
NF1-218ENST00000577967 A0A096LNI7 61 aa3.25□□□□□ -1.89
NF1-218ENST00000577967 NREPQ16612 68 aa3.24□□□□□ -1.89
NF1-218ENST00000577967 PIEZO2Q9H5I5 2752 aa3.24□□□□□ -1.89
NF1-218ENST00000577967 A0A087WYN8 130 aa3.24□□□□□ -1.89
NF1-218ENST00000577967 PPDPFQ9H3Y8 114 aa3.24□□□□□ -1.89
NF1-218ENST00000577967 USP17L23D6RBM5 183 aa3.24□□□□□ -1.89
NF1-218ENST00000577967 ESRGQ1W209 222 aa3.24□□□□□ -1.89
NF1-218ENST00000577967 TTC28Q96AY4 2481 aa3.24□□□□□ -1.89
NF1-218ENST00000577967 AKAP6Q13023 2319 aa3.24□□□□□ -1.89
NF1-218ENST00000577967 NAV3Q8IVL0 2385 aa3.23□□□□□ -1.89
NF1-218ENST00000577967 A0A1B0GUV1 79 aa3.23□□□□□ -1.89
NF1-218ENST00000577967 HRCT1Q6UXD1 115 aa3.23□□□□□ -1.89
NF1-218ENST00000577967 SCXQ7RTU7 201 aa3.23□□□□□ -1.89
NF1-218ENST00000577967 PLAC8L1A1L4L8 177 aa3.23□□□□□ -1.89
NF1-218ENST00000577967 Q8NAQ8 132 aa3.23□□□□□ -1.89
NF1-218ENST00000577967 TNRC18O15417 2968 aaPredicted RBP3.23□□□□□ -1.89
NF1-218ENST00000577967 LAMA2P24043 3122 aaKnown RBP3.22□□□□□ -1.89
NF1-218ENST00000577967 ANKHD1Q8IWZ3 2542 aaKnown RBP3.22□□□□□ -1.89
NF1-218ENST00000577967 LST1O00453 97 aa3.22□□□□□ -1.89
NF1-218ENST00000577967 ZNF73O43830 326 aaPredicted RBP3.22□□□□□ -1.89
NF1-218ENST00000577967 SDIM1Q6ZPB5 146 aa3.22□□□□□ -1.89
NF1-218ENST00000577967 FAM236AA0A1B0GUQ0 79 aa3.22□□□□□ -1.89
NF1-218ENST00000577967 FAM236BA0A1B0GV22 79 aa3.22□□□□□ -1.89
NF1-218ENST00000577967 MT-ATP8P03928 68 aa3.22□□□□□ -1.89
NF1-218ENST00000577967 CSNK1G2-AS1Q8NCQ2 148 aa3.22□□□□□ -1.89
NF1-218ENST00000577967 TRBV10-3A0A0K0K1G6 114 aa3.22□□□□□ -1.89
NF1-218ENST00000577967 M0QXV9 152 aa3.22□□□□□ -1.89
NF1-218ENST00000577967 Q6ZRU5 148 aa3.22□□□□□ -1.89
NF1-218ENST00000577967 NBASA2RRP1 2371 aa3.21□□□□□ -1.9
NF1-218ENST00000577967 IGF2RP11717 2491 aa3.21□□□□□ -1.9
NF1-218ENST00000577967 IGLV5-52A0A0A0MRZ9 124 aa3.21□□□□□ -1.9
NF1-218ENST00000577967 SPATA3Q8NHX4 192 aa3.21□□□□□ -1.9
NF1-218ENST00000577967 H0Y9J4 135 aa3.21□□□□□ -1.9
NF1-218ENST00000577967 Q6ZQY7 126 aa3.21□□□□□ -1.9
NF1-218ENST00000577967 UPK3BQ9BT76 320 aa3.21□□□□□ -1.9
NF1-218ENST00000577967 REV3LO60673 3130 aa3.21□□□□□ -1.9
NF1-218ENST00000577967 A0A1B0GX51 115 aa3.21□□□□□ -1.9
NF1-218ENST00000577967 EGFEM1PQ0D2K5 195 aa3.21□□□□□ -1.9
NF1-218ENST00000577967 REG3GQ6UW15 175 aa3.21□□□□□ -1.9
NF1-218ENST00000577967 MDFIQ99750 246 aa3.21□□□□□ -1.9
NF1-218ENST00000577967 MED13LQ71F56 2210 aa3.21□□□□□ -1.9
NF1-218ENST00000577967 IGLV9-49A0A0B4J1Y8 123 aa3.21□□□□□ -1.9
NF1-218ENST00000577967 C3orf84H3BNL1 204 aa3.21□□□□□ -1.9
NF1-218ENST00000577967 A8MTW9 85 aa3.2□□□□□ -1.9
NF1-218ENST00000577967 DHRS4-AS1Q9P1J3 65 aa3.2□□□□□ -1.9
NF1-218ENST00000577967 PRUNE2Q8WUY3 3088 aa3.2□□□□□ -1.9
NF1-218ENST00000577967 ENHOQ6UWT2 76 aa3.2□□□□□ -1.9
NF1-218ENST00000577967 Q8N814 137 aa3.2□□□□□ -1.9
NF1-218ENST00000577967 GIG44P09565 113 aaPredicted RBP3.2□□□□□ -1.9
NF1-218ENST00000577967 NHLRC4P0CG21 123 aaPredicted RBP3.2□□□□□ -1.9
NF1-218ENST00000577967 WFDC9Q8NEX5 89 aa3.2□□□□□ -1.9
NF1-218ENST00000577967 C7orf33Q8WU49 177 aa3.2□□□□□ -1.9
NF1-218ENST00000577967 EYSQ5T1H1 3165 aa3.2□□□□□ -1.9
NF1-218ENST00000577967 IGLV5-39A0A0G2JS06 123 aa3.19□□□□□ -1.9
NF1-218ENST00000577967 C4orf48Q5BLP8 95 aa3.19□□□□□ -1.9
NF1-218ENST00000577967 LINC01561Q8N1V8 128 aa3.19□□□□□ -1.9
NF1-218ENST00000577967 AGRNO00468 2067 aa3.19□□□□□ -1.9
NF1-218ENST00000577967 NDUFC2-KCTD14E9PQ53 114 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms