RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 DNAJC30Q96LL9 226 aa3.83□□□□□ -1.8
VAPA-203ENST00000577539 NTN5Q8WTR8 489 aaPredicted RBP3.83□□□□□ -1.8
VAPA-203ENST00000577539 ESM1Q9NQ30 184 aa3.83□□□□□ -1.8
VAPA-203ENST00000577539 TOMM7Q9P0U1 55 aa3.83□□□□□ -1.8
VAPA-203ENST00000577539 A0A0B4J2C4 111 aa3.83□□□□□ -1.8
VAPA-203ENST00000577539 LINC00694P0DN24 101 aa3.83□□□□□ -1.8
VAPA-203ENST00000577539 ATXN8Q156A1 80 aa3.83□□□□□ -1.8
VAPA-203ENST00000577539 TRGV4A0A0C4DH28 118 aa3.82□□□□□ -1.8
VAPA-203ENST00000577539 COX6A2Q02221 97 aa3.82□□□□□ -1.8
VAPA-203ENST00000577539 PRIMA1Q86XR5 153 aa3.82□□□□□ -1.8
VAPA-203ENST00000577539 LINC01561Q8N1V8 128 aa3.82□□□□□ -1.8
VAPA-203ENST00000577539 FAM104AQ969W3 186 aa3.82□□□□□ -1.8
VAPA-203ENST00000577539 A8MTW9 85 aa3.82□□□□□ -1.8
VAPA-203ENST00000577539 K7EQD1 137 aa3.82□□□□□ -1.8
VAPA-203ENST00000577539 RPL13AP40429 203 aaKnown RBP3.82□□□□□ -1.8
VAPA-203ENST00000577539 CRYBA4P53673 196 aa3.82□□□□□ -1.8
VAPA-203ENST00000577539 TEX29Q8N6K0 151 aa3.82□□□□□ -1.8
VAPA-203ENST00000577539 TMEM101Q96IK0 257 aa3.82□□□□□ -1.8
VAPA-203ENST00000577539 CARD19Q96LW7 228 aa3.82□□□□□ -1.8
VAPA-203ENST00000577539 PLA2G2AP14555 144 aa3.82□□□□□ -1.8
VAPA-203ENST00000577539 MIAQ16674 131 aa3.82□□□□□ -1.8
VAPA-203ENST00000577539 ATP6V0E2Q8NHE4 81 aa3.82□□□□□ -1.8
VAPA-203ENST00000577539 CLEC2BQ92478 149 aa3.82□□□□□ -1.8
VAPA-203ENST00000577539 FASNP49327 2511 aaKnown RBP3.82□□□□□ -1.8
VAPA-203ENST00000577539 LOC100131303A0A0U1RQF7 123 aa3.81□□□□□ -1.8
VAPA-203ENST00000577539 HERVK_113P63121 156 aa3.81□□□□□ -1.8
VAPA-203ENST00000577539 GAGE6Q13070 117 aa3.81□□□□□ -1.8
VAPA-203ENST00000577539 PIK3CD-AS1Q5SR53 167 aa3.81□□□□□ -1.8
VAPA-203ENST00000577539 ZFAND6Q6FIF0 208 aa3.81□□□□□ -1.8
VAPA-203ENST00000577539 C2orf82Q6UX34 121 aa3.81□□□□□ -1.8
VAPA-203ENST00000577539 TMEM86BQ8N661 226 aa3.81□□□□□ -1.8
VAPA-203ENST00000577539 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.81□□□□□ -1.8
VAPA-203ENST00000577539 LINC01006Q8NI28 216 aa3.81□□□□□ -1.8
VAPA-203ENST00000577539 EDA2RQ9HAV5 297 aa3.81□□□□□ -1.8
VAPA-203ENST00000577539 ICOSQ9Y6W8 199 aa3.81□□□□□ -1.8
VAPA-203ENST00000577539 APCP25054 2843 aa3.81□□□□□ -1.8
VAPA-203ENST00000577539 CUBNO60494 3623 aa3.81□□□□□ -1.8
VAPA-203ENST00000577539 MT-ATP8P03928 68 aa3.81□□□□□ -1.8
VAPA-203ENST00000577539 DEFB130BP0DP73 79 aa3.81□□□□□ -1.8
VAPA-203ENST00000577539 DEFB130AP0DP74 79 aa3.81□□□□□ -1.8
VAPA-203ENST00000577539 CHCHD5Q9BSY4 110 aa3.81□□□□□ -1.8
VAPA-203ENST00000577539 TMEM243Q9BU79 118 aa3.81□□□□□ -1.8
VAPA-203ENST00000577539 LINC00242Q5T6M2 205 aa3.81□□□□□ -1.8
VAPA-203ENST00000577539 KRTAP1-3Q8IUG1 177 aa3.81□□□□□ -1.8
VAPA-203ENST00000577539 LITAFQ99732 161 aa3.8□□□□□ -1.8
VAPA-203ENST00000577539 KRTAP9-9Q9BYP9 154 aa3.8□□□□□ -1.8
VAPA-203ENST00000577539 KRTAP9-4Q9BYQ2 154 aa3.8□□□□□ -1.8
VAPA-203ENST00000577539 TRAV4A0A0B4J268 109 aa3.8□□□□□ -1.8
VAPA-203ENST00000577539 XGP55808 180 aa3.8□□□□□ -1.8
VAPA-203ENST00000577539 DAZ2Q13117 558 aaKnown RBP3.8□□□□□ -1.8
VAPA-203ENST00000577539 NTM-AS1Q6ZSK4 140 aa3.8□□□□□ -1.8
VAPA-203ENST00000577539 DAZ4Q86SG3 579 aaKnown RBP3.8□□□□□ -1.8
VAPA-203ENST00000577539 DAZ3Q9NR90 486 aaKnown RBP3.8□□□□□ -1.8
VAPA-203ENST00000577539 TRBV10-1A0A0K0K1A3 114 aa3.8□□□□□ -1.8
VAPA-203ENST00000577539 TEX49A0A1B0GTD5 131 aa3.8□□□□□ -1.8
VAPA-203ENST00000577539 CKS1BP61024 79 aa3.8□□□□□ -1.8
VAPA-203ENST00000577539 SPANXDQ9BXN6 97 aa3.8□□□□□ -1.8
VAPA-203ENST00000577539 SPANXCQ9NY87 97 aa3.8□□□□□ -1.8
VAPA-203ENST00000577539 TRBV30A0A0K0K1B3 111 aa3.79□□□□□ -1.8
VAPA-203ENST00000577539 A0A1B0GV72 72 aa3.79□□□□□ -1.8
VAPA-203ENST00000577539 TMEM262E9PQX1 116 aa3.79□□□□□ -1.8
VAPA-203ENST00000577539 KRTAP19-1Q8IUB9 90 aa3.79□□□□□ -1.8
VAPA-203ENST00000577539 C11orf68Q9H3H3 251 aaKnown RBP3.79□□□□□ -1.8
VAPA-203ENST00000577539 HECTD1Q9ULT8 2610 aa3.79□□□□□ -1.8
VAPA-203ENST00000577539 HELZ2Q9BYK8 2649 aaKnown RBP3.79□□□□□ -1.8
VAPA-203ENST00000577539 NDUFA1O15239 70 aa3.79□□□□□ -1.8
VAPA-203ENST00000577539 IFITM1P13164 125 aa3.79□□□□□ -1.8
VAPA-203ENST00000577539 A0A096LPF7 62 aa3.79□□□□□ -1.8
VAPA-203ENST00000577539 TRBV10-2A0A0K0K1G8 114 aa3.79□□□□□ -1.8
VAPA-203ENST00000577539 LINC00308Q8TCZ7 52 aa3.79□□□□□ -1.8
VAPA-203ENST00000577539 UBE2WQ96B02 151 aa3.79□□□□□ -1.8
VAPA-203ENST00000577539 C16orf74Q96GX8 76 aa3.79□□□□□ -1.8
VAPA-203ENST00000577539 TRAV8-4A0A0B4J246 113 aa3.78□□□□□ -1.8
VAPA-203ENST00000577539 SMIM1B2RUZ4 78 aa3.78□□□□□ -1.8
VAPA-203ENST00000577539 CRLF1O75462 422 aa3.78□□□□□ -1.8
VAPA-203ENST00000577539 SCGB1A1P11684 91 aa3.78□□□□□ -1.8
VAPA-203ENST00000577539 CMC4P56277 68 aaPredicted RBP3.78□□□□□ -1.8
VAPA-203ENST00000577539 LINC00158P58513 81 aa3.78□□□□□ -1.8
VAPA-203ENST00000577539 FAM19A1Q7Z5A9 133 aa3.78□□□□□ -1.8
VAPA-203ENST00000577539 C5orf38Q86SI9 138 aa3.78□□□□□ -1.8
VAPA-203ENST00000577539 CDC42SE2Q9NRR3 84 aa3.78□□□□□ -1.8
VAPA-203ENST00000577539 UBR5O95071 2799 aaPredicted RBP3.78□□□□□ -1.8
VAPA-203ENST00000577539 ITPR2Q14571 2701 aa3.78□□□□□ -1.8
VAPA-203ENST00000577539 SMR3AQ99954 134 aa3.78□□□□□ -1.8
VAPA-203ENST00000577539 SNCGO76070 127 aa3.78□□□□□ -1.8
VAPA-203ENST00000577539 CLPSL2Q6UWE3 100 aa3.78□□□□□ -1.8
VAPA-203ENST00000577539 SBSPONQ8IVN8 264 aa3.78□□□□□ -1.8
VAPA-203ENST00000577539 PFN2P35080 140 aa3.77□□□□□ -1.81
VAPA-203ENST00000577539 SETXQ7Z333 2677 aaKnown RBP3.77□□□□□ -1.81
VAPA-203ENST00000577539 IGLV5-45A0A087WSX0 123 aa3.77□□□□□ -1.81
VAPA-203ENST00000577539 H7C423 109 aa3.77□□□□□ -1.81
VAPA-203ENST00000577539 TIMM17BO60830 172 aa3.77□□□□□ -1.81
VAPA-203ENST00000577539 IGLV1-51P01701 117 aa3.77□□□□□ -1.81
VAPA-203ENST00000577539 GIG44P09565 113 aaPredicted RBP3.77□□□□□ -1.81
VAPA-203ENST00000577539 COPS9Q8WXC6 57 aa3.77□□□□□ -1.81
VAPA-203ENST00000577539 NBEAL2Q6ZNJ1 2754 aa3.77□□□□□ -1.81
VAPA-203ENST00000577539 GCN1Q92616 2671 aaKnown RBP3.77□□□□□ -1.81
VAPA-203ENST00000577539 IGLV5-39A0A0G2JS06 123 aa3.77□□□□□ -1.81
VAPA-203ENST00000577539 NIPBLQ6KC79 2804 aaeCLIP3.76□□□□□ -1.81
VAPA-203ENST00000577539 IGLV4-60A0A075B6I1 120 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 197.4 ms