RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 SYCNQ0VAF6 134 aa9.06□□□□□ -0.96
PCDHGA9-201ENST00000573521 ENHOQ6UWT2 76 aa9.06□□□□□ -0.96
PCDHGA9-201ENST00000573521 BCE1O60756 84 aa9.06□□□□□ -0.96
PCDHGA9-201ENST00000573521 CPAMD8Q8IZJ3 1885 aa9.06□□□□□ -0.96
PCDHGA9-201ENST00000573521 Q6ZS46 218 aa9.06□□□□□ -0.96
PCDHGA9-201ENST00000573521 COL4A2P08572 1712 aa9.06□□□□□ -0.96
PCDHGA9-201ENST00000573521 SMIM26A0A096LP01 95 aa9.05□□□□□ -0.96
PCDHGA9-201ENST00000573521 SMIM11BQ8TCY0 68 aa9.05□□□□□ -0.96
PCDHGA9-201ENST00000573521 LINC00242Q5T6M2 205 aa9.05□□□□□ -0.96
PCDHGA9-201ENST00000573521 C11orf45Q8TAV5 145 aa9.05□□□□□ -0.96
PCDHGA9-201ENST00000573521 A0A087WZ39 114 aa9.05□□□□□ -0.96
PCDHGA9-201ENST00000573521 TRBV10-3A0A0K0K1G6 114 aa9.04□□□□□ -0.96
PCDHGA9-201ENST00000573521 IGHV4-28A0A0C4DH34 117 aa9.04□□□□□ -0.96
PCDHGA9-201ENST00000573521 SMIM1B2RUZ4 78 aa9.03□□□□□ -0.96
PCDHGA9-201ENST00000573521 ACACBO00763 2458 aa9.03□□□□□ -0.96
PCDHGA9-201ENST00000573521 HILS1P60008 231 aa9.02□□□□□ -0.97
PCDHGA9-201ENST00000573521 POM121L12Q8N7R1 296 aa9.02□□□□□ -0.97
PCDHGA9-201ENST00000573521 ZNF706Q9Y5V0 76 aaPredicted RBP9.02□□□□□ -0.97
PCDHGA9-201ENST00000573521 EGFEM1PQ0D2K5 195 aa9.02□□□□□ -0.97
PCDHGA9-201ENST00000573521 PTPRQQ9UMZ3 2332 aa9.02□□□□□ -0.97
PCDHGA9-201ENST00000573521 SERP1Q9Y6X1 66 aa9.02□□□□□ -0.97
PCDHGA9-201ENST00000573521 SEC61GP60059 68 aa9.01□□□□□ -0.97
PCDHGA9-201ENST00000573521 Q6ZQY7 126 aa9.01□□□□□ -0.97
PCDHGA9-201ENST00000573521 NTM-AS1Q6ZSK4 140 aa9.01□□□□□ -0.97
PCDHGA9-201ENST00000573521 TRBV7-7A0A0K0K1E9 115 aa9.01□□□□□ -0.97
PCDHGA9-201ENST00000573521 C19orf84I3L1E1 186 aa9.01□□□□□ -0.97
PCDHGA9-201ENST00000573521 C4orf48Q5BLP8 95 aa9.01□□□□□ -0.97
PCDHGA9-201ENST00000573521 VPS13AQ96RL7 3174 aa9□□□□□ -0.97
PCDHGA9-201ENST00000573521 A0A1B0GUV1 79 aa9□□□□□ -0.97
PCDHGA9-201ENST00000573521 ZNF73O43830 326 aaPredicted RBP9□□□□□ -0.97
PCDHGA9-201ENST00000573521 DSCAMO60469 2012 aa8.99□□□□□ -0.97
PCDHGA9-201ENST00000573521 TRAV10A0A0B4J240 114 aa8.99□□□□□ -0.97
PCDHGA9-201ENST00000573521 BRK1Q8WUW1 75 aa8.99□□□□□ -0.97
PCDHGA9-201ENST00000573521 GAS8-AS1O95177 125 aa8.99□□□□□ -0.97
PCDHGA9-201ENST00000573521 SHISA2Q6UWI4 295 aa8.99□□□□□ -0.97
PCDHGA9-201ENST00000573521 A0A1B0GW54 56 aa8.99□□□□□ -0.97
PCDHGA9-201ENST00000573521 H0Y9J4 135 aa8.98□□□□□ -0.97
PCDHGA9-201ENST00000573521 PRR15LQ9BU68 103 aa8.98□□□□□ -0.97
PCDHGA9-201ENST00000573521 DEFB131BA0A096LNP1 70 aa8.98□□□□□ -0.97
PCDHGA9-201ENST00000573521 LOC107984640A0A0U1RRK4 108 aa8.97□□□□□ -0.97
PCDHGA9-201ENST00000573521 PROK1P58294 105 aa8.97□□□□□ -0.97
PCDHGA9-201ENST00000573521 KLK9Q2XQG4 91 aa8.97□□□□□ -0.97
PCDHGA9-201ENST00000573521 Q8N814 137 aa8.97□□□□□ -0.97
PCDHGA9-201ENST00000573521 LINC00474Q9P2X8 69 aa8.97□□□□□ -0.97
PCDHGA9-201ENST00000573521 CCDC179H3BU77 68 aa8.97□□□□□ -0.97
PCDHGA9-201ENST00000573521 PLXNB1O43157 2135 aa8.97□□□□□ -0.97
PCDHGA9-201ENST00000573521 FAM208BQ5VWN6 2430 aa8.97□□□□□ -0.97
PCDHGA9-201ENST00000573521 PPDPFQ9H3Y8 114 aa8.96□□□□□ -0.97
PCDHGA9-201ENST00000573521 ESM1Q9NQ30 184 aa8.96□□□□□ -0.97
PCDHGA9-201ENST00000573521 SLPIP03973 132 aa8.96□□□□□ -0.98
PCDHGA9-201ENST00000573521 KIF25-AS1Q9Y6Z4 181 aa8.96□□□□□ -0.98
PCDHGA9-201ENST00000573521 LINC01006Q8NI28 216 aa8.95□□□□□ -0.98
PCDHGA9-201ENST00000573521 NAV3Q8IVL0 2385 aa8.95□□□□□ -0.98
PCDHGA9-201ENST00000573521 CFAP54Q96N23 3096 aa8.95□□□□□ -0.98
PCDHGA9-201ENST00000573521 HIVEP2P31629 2446 aa8.95□□□□□ -0.98
PCDHGA9-201ENST00000573521 BBC3Q96PG8 261 aaPredicted RBP8.95□□□□□ -0.98
PCDHGA9-201ENST00000573521 EXPH5Q8NEV8 1989 aa8.94□□□□□ -0.98
PCDHGA9-201ENST00000573521 FAM19A1Q7Z5A9 133 aa8.94□□□□□ -0.98
PCDHGA9-201ENST00000573521 NRGNQ92686 78 aa8.94□□□□□ -0.98
PCDHGA9-201ENST00000573521 C16orf95Q9H693 158 aa8.94□□□□□ -0.98
PCDHGA9-201ENST00000573521 ODF3L2Q3SX64 289 aa8.94□□□□□ -0.98
PCDHGA9-201ENST00000573521 IGLV5-39A0A0G2JS06 123 aa8.93□□□□□ -0.98
PCDHGA9-201ENST00000573521 IGLV1-51P01701 117 aa8.93□□□□□ -0.98
PCDHGA9-201ENST00000573521 C2orf48Q96LS8 159 aa8.93□□□□□ -0.98
PCDHGA9-201ENST00000573521 TSPEAR-AS2P59090 65 aa8.93□□□□□ -0.98
PCDHGA9-201ENST00000573521 HIGD2AQ9BW72 106 aa8.93□□□□□ -0.98
PCDHGA9-201ENST00000573521 PRR14LQ5THK1 2151 aa8.93□□□□□ -0.98
PCDHGA9-201ENST00000573521 FRYLO94915 3013 aa8.93□□□□□ -0.98
PCDHGA9-201ENST00000573521 A8MZ25 164 aa8.92□□□□□ -0.98
PCDHGA9-201ENST00000573521 FAM19A4Q96LR4 140 aa8.92□□□□□ -0.98
PCDHGA9-201ENST00000573521 SBSPONQ8IVN8 264 aa8.91□□□□□ -0.98
PCDHGA9-201ENST00000573521 XAGE1AQ9HD64 81 aa8.91□□□□□ -0.98
PCDHGA9-201ENST00000573521 IGLV5-45A0A087WSX0 123 aa8.9□□□□□ -0.98
PCDHGA9-201ENST00000573521 DEFB4AO15263 64 aa8.9□□□□□ -0.98
PCDHGA9-201ENST00000573521 CXCL6P80162 114 aa8.9□□□□□ -0.98
PCDHGA9-201ENST00000573521 IGKV4-1P06312 121 aa8.9□□□□□ -0.98
PCDHGA9-201ENST00000573521 KPRPQ5T749 579 aaPredicted RBP8.9□□□□□ -0.98
PCDHGA9-201ENST00000573521 CYSRT1A8MQ03 144 aa8.9□□□□□ -0.99
PCDHGA9-201ENST00000573521 COL6A3P12111 3177 aa8.9□□□□□ -0.99
PCDHGA9-201ENST00000573521 RPS28P62857 69 aaKnown RBP8.89□□□□□ -0.99
PCDHGA9-201ENST00000573521 SPG11Q96JI7 2443 aa8.88□□□□□ -0.99
PCDHGA9-201ENST00000573521 C1orf158Q8N1D5 194 aa8.88□□□□□ -0.99
PCDHGA9-201ENST00000573521 ADAMTS20P59510 1910 aa8.88□□□□□ -0.99
PCDHGA9-201ENST00000573521 WDFY4Q6ZS81 3184 aa8.88□□□□□ -0.99
PCDHGA9-201ENST00000573521 C10orf99Q6UWK7 81 aa8.88□□□□□ -0.99
PCDHGA9-201ENST00000573521 CDIP1Q9H305 208 aa8.88□□□□□ -0.99
PCDHGA9-201ENST00000573521 DSCAML1Q8TD84 2053 aa8.88□□□□□ -0.99
PCDHGA9-201ENST00000573521 K7ERS5 55 aa8.87□□□□□ -0.99
PCDHGA9-201ENST00000573521 ADAMTSL4-AS1Q5T5F5 129 aa8.87□□□□□ -0.99
PCDHGA9-201ENST00000573521 WNK1Q9H4A3 2382 aa8.87□□□□□ -0.99
PCDHGA9-201ENST00000573521 CELSR3Q9NYQ7 3312 aa8.87□□□□□ -0.99
PCDHGA9-201ENST00000573521 FHL2Q14192 279 aa8.87□□□□□ -0.99
PCDHGA9-201ENST00000573521 TRBV7-6A0A0J9YX20 115 aa8.87□□□□□ -0.99
PCDHGA9-201ENST00000573521 WFDC11Q8NEX6 87 aa8.87□□□□□ -0.99
PCDHGA9-201ENST00000573521 PRYO14603 147 aa8.86□□□□□ -0.99
PCDHGA9-201ENST00000573521 Q8N2B8 174 aa8.86□□□□□ -0.99
PCDHGA9-201ENST00000573521 NCOR2Q9Y618 2525 aa8.85□□□□□ -0.99
PCDHGA9-201ENST00000573521 LINC00694P0DN24 101 aa8.85□□□□□ -0.99
PCDHGA9-201ENST00000573521 CRYGAP11844 174 aa8.85□□□□□ -0.99
PCDHGA9-201ENST00000573521 Q8N9L7 120 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms