RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 A6NED7 52 aa3.04□□□□□ -1.92
UBR1-208ENST00000569066 PIGYQ3MUY2 71 aa3.04□□□□□ -1.92
UBR1-208ENST00000569066 VMO1Q7Z5L0 202 aa3.04□□□□□ -1.92
UBR1-208ENST00000569066 LINC00269Q8N2A0 174 aa3.04□□□□□ -1.92
UBR1-208ENST00000569066 AMELXQ99217 191 aa3.04□□□□□ -1.92
UBR1-208ENST00000569066 COL4A4P53420 1690 aaPredicted RBP3.04□□□□□ -1.92
UBR1-208ENST00000569066 PIGBOS1A0A0B4J2F0 54 aa3.04□□□□□ -1.92
UBR1-208ENST00000569066 I3L3M4 83 aa3.04□□□□□ -1.92
UBR1-208ENST00000569066 NDUFC1O43677 76 aa3.04□□□□□ -1.92
UBR1-208ENST00000569066 MP68P56378 58 aa3.04□□□□□ -1.92
UBR1-208ENST00000569066 TSPEAR-AS2P59090 65 aa3.04□□□□□ -1.92
UBR1-208ENST00000569066 MUSTN1Q8IVN3 82 aa3.04□□□□□ -1.92
UBR1-208ENST00000569066 SPTSSBQ8NFR3 76 aa3.04□□□□□ -1.92
UBR1-208ENST00000569066 R4GN34 69 aa3.04□□□□□ -1.92
UBR1-208ENST00000569066 COL4A5P29400 1685 aa3.04□□□□□ -1.92
UBR1-208ENST00000569066 RTTNQ86VV8 2226 aa3.03□□□□□ -1.92
UBR1-208ENST00000569066 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.03□□□□□ -1.92
UBR1-208ENST00000569066 TRAV12-1A0A0B4J245 112 aa3.03□□□□□ -1.92
UBR1-208ENST00000569066 H3BQ85 93 aa3.03□□□□□ -1.92
UBR1-208ENST00000569066 ATP11AUNQ6ZP68 121 aa3.03□□□□□ -1.92
UBR1-208ENST00000569066 FAM167A-AS1Q96KT0 104 aa3.03□□□□□ -1.92
UBR1-208ENST00000569066 PHLDA3Q9Y5J5 127 aa3.03□□□□□ -1.92
UBR1-208ENST00000569066 CADP27708 2225 aa3.03□□□□□ -1.92
UBR1-208ENST00000569066 K7ERS5 55 aa3.03□□□□□ -1.92
UBR1-208ENST00000569066 IGLV3-27P01718 113 aa3.03□□□□□ -1.92
UBR1-208ENST00000569066 COX6CP09669 75 aa3.03□□□□□ -1.92
UBR1-208ENST00000569066 XIRP2A4UGR9 3374 aa3.03□□□□□ -1.93
UBR1-208ENST00000569066 TRAV12-3A0A0B4J271 114 aa3.02□□□□□ -1.93
UBR1-208ENST00000569066 IGKV1-12A0A0C4DH73 117 aa3.02□□□□□ -1.93
UBR1-208ENST00000569066 M0R1W7 72 aa3.02□□□□□ -1.93
UBR1-208ENST00000569066 IGKV1D-12P01611 117 aa3.02□□□□□ -1.93
UBR1-208ENST00000569066 IGLV3-19P01714 112 aa3.02□□□□□ -1.93
UBR1-208ENST00000569066 Q8N6K4 173 aa3.02□□□□□ -1.93
UBR1-208ENST00000569066 MUC4Q99102 2169 aa3.02□□□□□ -1.93
UBR1-208ENST00000569066 hDV103S1A0JD37 113 aa3.02□□□□□ -1.93
UBR1-208ENST00000569066 SDHAF1A6NFY7 115 aa3.02□□□□□ -1.93
UBR1-208ENST00000569066 STATHP02808 62 aa3.02□□□□□ -1.93
UBR1-208ENST00000569066 Q5VV11 94 aa3.02□□□□□ -1.93
UBR1-208ENST00000569066 HCP5Q6MZN7 132 aa3.02□□□□□ -1.93
UBR1-208ENST00000569066 NDUFA12Q9UI09 145 aa3.02□□□□□ -1.93
UBR1-208ENST00000569066 ZNF407Q9C0G0 2248 aa3.01□□□□□ -1.93
UBR1-208ENST00000569066 BCE1O60756 84 aa3.01□□□□□ -1.93
UBR1-208ENST00000569066 IGKV1-17P01599 117 aa3.01□□□□□ -1.93
UBR1-208ENST00000569066 CCL4P13236 92 aa3.01□□□□□ -1.93
UBR1-208ENST00000569066 KRTAP25-1Q3LHN0 102 aa3.01□□□□□ -1.93
UBR1-208ENST00000569066 PATE2Q6UY27 113 aa3.01□□□□□ -1.93
UBR1-208ENST00000569066 DSCAMO60469 2012 aa3.01□□□□□ -1.93
UBR1-208ENST00000569066 IGLV3-9A0A075B6K5 115 aa3□□□□□ -1.93
UBR1-208ENST00000569066 TRAV10A0A0B4J240 114 aa3□□□□□ -1.93
UBR1-208ENST00000569066 TRBV7-4A0A0J9YYF1 115 aa3□□□□□ -1.93
UBR1-208ENST00000569066 IGIPA6NJ69 53 aa3□□□□□ -1.93
UBR1-208ENST00000569066 HCG22E2RYF7 251 aa3□□□□□ -1.93
UBR1-208ENST00000569066 GNRH2O43555 120 aa3□□□□□ -1.93
UBR1-208ENST00000569066 LYZL1Q6UWQ5 148 aa3□□□□□ -1.93
UBR1-208ENST00000569066 ENHOQ6UWT2 76 aa3□□□□□ -1.93
UBR1-208ENST00000569066 TMEM141Q96I45 108 aa3□□□□□ -1.93
UBR1-208ENST00000569066 KIAA0100Q14667 2235 aaKnown RBP3□□□□□ -1.93
UBR1-208ENST00000569066 USF3Q68DE3 2245 aa3□□□□□ -1.93
UBR1-208ENST00000569066 B4DSR2 109 aa3□□□□□ -1.93
UBR1-208ENST00000569066 DNAL4O96015 105 aa3□□□□□ -1.93
UBR1-208ENST00000569066 PRRC2BQ5JSZ5 2229 aaKnown RBP2.99□□□□□ -1.93
UBR1-208ENST00000569066 ARFGEF3Q5TH69 2177 aa2.99□□□□□ -1.93
UBR1-208ENST00000569066 IGLV3-1P01715 115 aa2.99□□□□□ -1.93
UBR1-208ENST00000569066 HRES1P13985 223 aa2.99□□□□□ -1.93
UBR1-208ENST00000569066 ZNF826PQ6ZT77 177 aa2.99□□□□□ -1.93
UBR1-208ENST00000569066 LINC00304Q8N9R0 145 aa2.99□□□□□ -1.93
UBR1-208ENST00000569066 FDCSPQ8NFU4 85 aa2.99□□□□□ -1.93
UBR1-208ENST00000569066 C14orf132Q9NPU4 83 aa2.99□□□□□ -1.93
UBR1-208ENST00000569066 MGAQ8IWI9 3026 aa2.99□□□□□ -1.93
UBR1-208ENST00000569066 C11orf86A6NJI1 115 aa2.99□□□□□ -1.93
UBR1-208ENST00000569066 CRIP1P50238 77 aa2.99□□□□□ -1.93
UBR1-208ENST00000569066 B9D2Q9BPU9 175 aa2.99□□□□□ -1.93
UBR1-208ENST00000569066 TMEM14BQ9NUH8 114 aa2.99□□□□□ -1.93
UBR1-208ENST00000569066 M0R3E3 92 aa2.98□□□□□ -1.93
UBR1-208ENST00000569066 Q86TA4 180 aa2.98□□□□□ -1.93
UBR1-208ENST00000569066 CNTRLQ7Z7A1 2325 aa2.98□□□□□ -1.93
UBR1-208ENST00000569066 C17orf98A8MV24 154 aa2.98□□□□□ -1.93
UBR1-208ENST00000569066 LCE3AQ5TA76 89 aa2.98□□□□□ -1.93
UBR1-208ENST00000569066 DYNLRB2Q8TF09 96 aa2.98□□□□□ -1.93
UBR1-208ENST00000569066 OBSCN-AS1Q96MR7 158 aa2.98□□□□□ -1.93
UBR1-208ENST00000569066 CEP192Q8TEP8 1941 aa2.97□□□□□ -1.93
UBR1-208ENST00000569066 TRBV10-3A0A0K0K1G6 114 aa2.97□□□□□ -1.93
UBR1-208ENST00000569066 A0A1W2PNN7 141 aa2.97□□□□□ -1.93
UBR1-208ENST00000569066 PRM2P04554 102 aa2.97□□□□□ -1.93
UBR1-208ENST00000569066 ATP5EP2Q5VTU8 51 aa2.97□□□□□ -1.93
UBR1-208ENST00000569066 TMEM254Q8TBM7 123 aa2.97□□□□□ -1.93
UBR1-208ENST00000569066 SCGB3A1Q96QR1 104 aa2.97□□□□□ -1.93
UBR1-208ENST00000569066 CHKB-CPT1BH3BT56 60 aa2.96□□□□□ -1.93
UBR1-208ENST00000569066 LY6HO94772 140 aa2.96□□□□□ -1.93
UBR1-208ENST00000569066 Q8IYB0 196 aa2.96□□□□□ -1.93
UBR1-208ENST00000569066 COL18A1P39060 1754 aa2.96□□□□□ -1.94
UBR1-208ENST00000569066 TNCP24821 2201 aa2.96□□□□□ -1.94
UBR1-208ENST00000569066 LYPD1Q8N2G4 141 aa2.95□□□□□ -1.94
UBR1-208ENST00000569066 IGKV1D-37A0A075B6S9 117 aa2.95□□□□□ -1.94
UBR1-208ENST00000569066 PSCAO43653 123 aa2.95□□□□□ -1.94
UBR1-208ENST00000569066 S100A4P26447 101 aaKnown RBP2.95□□□□□ -1.94
UBR1-208ENST00000569066 BSPH1Q075Z2 132 aa2.95□□□□□ -1.94
UBR1-208ENST00000569066 CCL4L1Q8NHW4 92 aa2.95□□□□□ -1.94
UBR1-208ENST00000569066 ZNF625Q96I27 306 aaPredicted RBP2.95□□□□□ -1.94
UBR1-208ENST00000569066 CTSGP08311 255 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms