RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 CHCHD7Q9BUK0 85 aa8.37□□□□□ -1.07
CDH1-210ENST00000566612 SVEP1Q4LDE5 3571 aa8.37□□□□□ -1.07
CDH1-210ENST00000566612 TEX49A0A1B0GTD5 131 aa8.37□□□□□ -1.07
CDH1-210ENST00000566612 TRBV10-2A0A0K0K1G8 114 aa8.36□□□□□ -1.07
CDH1-210ENST00000566612 LY6G6DO95868 133 aa8.36□□□□□ -1.07
CDH1-210ENST00000566612 UBE2D1P51668 147 aa8.36□□□□□ -1.07
CDH1-210ENST00000566612 LINC00308Q8TCZ7 52 aa8.36□□□□□ -1.07
CDH1-210ENST00000566612 SPART-AS1P0CW21 52 aa8.36□□□□□ -1.07
CDH1-210ENST00000566612 ZNF561-AS1K7EIQ3 104 aa8.36□□□□□ -1.07
CDH1-210ENST00000566612 TIRAPP58753 221 aa8.36□□□□□ -1.07
CDH1-210ENST00000566612 TRBV6-8A0A0A6YYG3 113 aa8.35□□□□□ -1.07
CDH1-210ENST00000566612 ZNF575Q86XF7 245 aa8.35□□□□□ -1.07
CDH1-210ENST00000566612 Q9HAA7 133 aa8.35□□□□□ -1.07
CDH1-210ENST00000566612 COX7A2LO14548 114 aa8.35□□□□□ -1.07
CDH1-210ENST00000566612 HILS1P60008 231 aa8.35□□□□□ -1.07
CDH1-210ENST00000566612 TRAV26-1A0A087WT03 109 aa8.35□□□□□ -1.07
CDH1-210ENST00000566612 COX6A2Q02221 97 aa8.35□□□□□ -1.07
CDH1-210ENST00000566612 LINC00242Q5T6M2 205 aa8.35□□□□□ -1.07
CDH1-210ENST00000566612 LINC00269Q8N2A0 174 aa8.35□□□□□ -1.07
CDH1-210ENST00000566612 KLK12Q9UKR0 248 aa8.35□□□□□ -1.07
CDH1-210ENST00000566612 ADAMTSL4-AS1Q5T5F5 129 aa8.35□□□□□ -1.07
CDH1-210ENST00000566612 F8P00451 2351 aa8.34□□□□□ -1.07
CDH1-210ENST00000566612 TRBV6-4A0A1B0GX49 114 aa8.34□□□□□ -1.07
CDH1-210ENST00000566612 MRPL23Q16540 153 aaKnown RBP8.34□□□□□ -1.07
CDH1-210ENST00000566612 NDUFA1O15239 70 aa8.34□□□□□ -1.07
CDH1-210ENST00000566612 HIST1H4AP62805 103 aaKnown RBP8.34□□□□□ -1.07
CDH1-210ENST00000566612 EDA2RQ9HAV5 297 aa8.34□□□□□ -1.07
CDH1-210ENST00000566612 ZANQ9Y493 2812 aa8.34□□□□□ -1.07
CDH1-210ENST00000566612 OVOL2Q9BRP0 275 aa8.34□□□□□ -1.07
CDH1-210ENST00000566612 MT-ATP8P03928 68 aa8.33□□□□□ -1.08
CDH1-210ENST00000566612 INAFM2P0DMQ5 153 aa8.33□□□□□ -1.08
CDH1-210ENST00000566612 UBE2D3P61077 147 aa8.33□□□□□ -1.08
CDH1-210ENST00000566612 UBE2D2P62837 147 aa8.33□□□□□ -1.08
CDH1-210ENST00000566612 AMELXQ99217 191 aa8.33□□□□□ -1.08
CDH1-210ENST00000566612 CDC42SE2Q9NRR3 84 aa8.32□□□□□ -1.08
CDH1-210ENST00000566612 DPH3Q96FX2 82 aa8.32□□□□□ -1.08
CDH1-210ENST00000566612 IGLV1-51P01701 117 aa8.32□□□□□ -1.08
CDH1-210ENST00000566612 C11orf72Q8NBR9 251 aa8.32□□□□□ -1.08
CDH1-210ENST00000566612 MRAPQ8TCY5 172 aa8.32□□□□□ -1.08
CDH1-210ENST00000566612 LECT2O14960 151 aa8.31□□□□□ -1.08
CDH1-210ENST00000566612 BEAN1Q3B7T3 259 aa8.31□□□□□ -1.08
CDH1-210ENST00000566612 TRBV30A0A0K0K1B3 111 aa8.3□□□□□ -1.08
CDH1-210ENST00000566612 HRNRQ86YZ3 2850 aaPredicted RBP8.3□□□□□ -1.08
CDH1-210ENST00000566612 H3BT86 120 aa8.3□□□□□ -1.08
CDH1-210ENST00000566612 Q8N2B8 174 aa8.3□□□□□ -1.08
CDH1-210ENST00000566612 IGLV4-60A0A075B6I1 120 aa8.29□□□□□ -1.08
CDH1-210ENST00000566612 LINC00526Q96FQ7 95 aa8.29□□□□□ -1.08
CDH1-210ENST00000566612 IGKV2D-24A0A075B6R9 120 aa8.29□□□□□ -1.08
CDH1-210ENST00000566612 SPANXDQ9BXN6 97 aa8.29□□□□□ -1.08
CDH1-210ENST00000566612 SPANXCQ9NY87 97 aa8.29□□□□□ -1.08
CDH1-210ENST00000566612 CRYBG3Q68DQ2 2970 aa8.28□□□□□ -1.08
CDH1-210ENST00000566612 SMIM1B2RUZ4 78 aa8.28□□□□□ -1.08
CDH1-210ENST00000566612 NCR3O14931 201 aa8.28□□□□□ -1.08
CDH1-210ENST00000566612 SPAG11BQ08648 103 aa8.28□□□□□ -1.08
CDH1-210ENST00000566612 A0A096LNT2 108 aa8.28□□□□□ -1.08
CDH1-210ENST00000566612 FSHBP01225 129 aa8.28□□□□□ -1.08
CDH1-210ENST00000566612 REG3AQ06141 175 aa8.28□□□□□ -1.08
CDH1-210ENST00000566612 FAM110AQ9BQ89 295 aa8.28□□□□□ -1.08
CDH1-210ENST00000566612 DCHS2Q6V1P9 2916 aa8.28□□□□□ -1.08
CDH1-210ENST00000566612 CHCHD10Q8WYQ3 142 aaPredicted RBP8.27□□□□□ -1.09
CDH1-210ENST00000566612 SPENQ96T58 3664 aaKnown RBP8.27□□□□□ -1.09
CDH1-210ENST00000566612 UTP20O75691 2785 aaKnown RBP8.27□□□□□ -1.09
CDH1-210ENST00000566612 IGHV4-28A0A0C4DH34 117 aa8.27□□□□□ -1.09
CDH1-210ENST00000566612 H0YGX0 51 aa8.27□□□□□ -1.09
CDH1-210ENST00000566612 LINC00959A0A1B0GUT2 108 aa8.26□□□□□ -1.09
CDH1-210ENST00000566612 SLPIP03973 132 aa8.26□□□□□ -1.09
CDH1-210ENST00000566612 GCN1Q92616 2671 aaKnown RBP8.26□□□□□ -1.09
CDH1-210ENST00000566612 SMIM9A6NGZ8 99 aa8.26□□□□□ -1.09
CDH1-210ENST00000566612 CAMK2N2Q96S95 79 aa8.26□□□□□ -1.09
CDH1-210ENST00000566612 ORMDL1Q9P0S3 153 aa8.26□□□□□ -1.09
CDH1-210ENST00000566612 TIMM17BO60830 172 aa8.25□□□□□ -1.09
CDH1-210ENST00000566612 NTM-AS1Q6ZSK4 140 aa8.25□□□□□ -1.09
CDH1-210ENST00000566612 NBEAL2Q6ZNJ1 2754 aa8.25□□□□□ -1.09
CDH1-210ENST00000566612 LYRM9A8MSI8 78 aa8.25□□□□□ -1.09
CDH1-210ENST00000566612 FHL2Q14192 279 aa8.25□□□□□ -1.09
CDH1-210ENST00000566612 B5MCH6 92 aa8.25□□□□□ -1.09
CDH1-210ENST00000566612 H7C423 109 aa8.24□□□□□ -1.09
CDH1-210ENST00000566612 XGP55808 180 aa8.24□□□□□ -1.09
CDH1-210ENST00000566612 C1orf43Q9BWL3 253 aa8.24□□□□□ -1.09
CDH1-210ENST00000566612 HIGD2BQ4VC39 106 aa8.24□□□□□ -1.09
CDH1-210ENST00000566612 LST1O00453 97 aa8.23□□□□□ -1.09
CDH1-210ENST00000566612 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.23□□□□□ -1.09
CDH1-210ENST00000566612 IGKV3D-7A0A0C4DH55 119 aa8.23□□□□□ -1.09
CDH1-210ENST00000566612 IBA57-AS1B1ANH7 110 aa8.23□□□□□ -1.09
CDH1-210ENST00000566612 C14orf132Q9NPU4 83 aa8.23□□□□□ -1.09
CDH1-210ENST00000566612 TEP1Q99973 2627 aaKnown RBP8.23□□□□□ -1.09
CDH1-210ENST00000566612 HAMPP81172 84 aa8.22□□□□□ -1.09
CDH1-210ENST00000566612 OXLD1Q5BKU9 147 aa8.22□□□□□ -1.09
CDH1-210ENST00000566612 GHRHP01286 108 aa8.22□□□□□ -1.09
CDH1-210ENST00000566612 RPL18AQ02543 176 aaKnown RBP8.22□□□□□ -1.09
CDH1-210ENST00000566612 C16orf95Q9H693 158 aa8.22□□□□□ -1.09
CDH1-210ENST00000566612 MAST4O15021 2626 aa8.22□□□□□ -1.09
CDH1-210ENST00000566612 MGAM2Q2M2H8 2515 aa8.22□□□□□ -1.09
CDH1-210ENST00000566612 FHL3Q13643 280 aa8.22□□□□□ -1.09
CDH1-210ENST00000566612 CCL18P55774 89 aa8.21□□□□□ -1.09
CDH1-210ENST00000566612 XAGE1AQ9HD64 81 aa8.21□□□□□ -1.09
CDH1-210ENST00000566612 UBE2DNLQ8IWF7 75 aa8.21□□□□□ -1.1
CDH1-210ENST00000566612 NKAPP1Q8N9T2 125 aa8.21□□□□□ -1.1
CDH1-210ENST00000566612 SPATA25Q9BR10 227 aa8.21□□□□□ -1.1
CDH1-210ENST00000566612 TMEM126AQ9H061 195 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms