RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 SPANXN1Q5VSR9 72 aa7.46□□□□□ -1.22
UBFD1-205ENST00000566136 ZFAND2AQ8N6M9 145 aa7.46□□□□□ -1.22
UBFD1-205ENST00000566136 SLC25A34Q6PIV7 304 aa7.45□□□□□ -1.22
UBFD1-205ENST00000566136 TENM1Q9UKZ4 2725 aa7.45□□□□□ -1.22
UBFD1-205ENST00000566136 IFI27L1Q96BM0 104 aa7.45□□□□□ -1.22
UBFD1-205ENST00000566136 RNASE4P34096 147 aaKnown RBP7.44□□□□□ -1.22
UBFD1-205ENST00000566136 MPV17L2Q567V2 206 aa7.44□□□□□ -1.22
UBFD1-205ENST00000566136 IGLL5B9A064 214 aa7.44□□□□□ -1.22
UBFD1-205ENST00000566136 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.43□□□□□ -1.22
UBFD1-205ENST00000566136 C20orf203Q8NBC4 194 aa7.43□□□□□ -1.22
UBFD1-205ENST00000566136 PSMB8P28062 276 aa7.43□□□□□ -1.22
UBFD1-205ENST00000566136 GTSCR1Q86UQ5 136 aa7.43□□□□□ -1.22
UBFD1-205ENST00000566136 CHCHD5Q9BSY4 110 aa7.43□□□□□ -1.22
UBFD1-205ENST00000566136 SORL1Q92673 2214 aa7.42□□□□□ -1.22
UBFD1-205ENST00000566136 TRAV21A0A0B4J279 112 aa7.42□□□□□ -1.22
UBFD1-205ENST00000566136 S100A4P26447 101 aaKnown RBP7.42□□□□□ -1.22
UBFD1-205ENST00000566136 LGALS9BQ3B8N2 356 aa7.42□□□□□ -1.22
UBFD1-205ENST00000566136 LGALS9CQ6DKI2 356 aa7.42□□□□□ -1.22
UBFD1-205ENST00000566136 CHAC1Q9BUX1 264 aa7.42□□□□□ -1.22
UBFD1-205ENST00000566136 LENEPQ9Y5L5 61 aa7.42□□□□□ -1.22
UBFD1-205ENST00000566136 GNRH2O43555 120 aa7.42□□□□□ -1.22
UBFD1-205ENST00000566136 PCP2Q8IVA1 136 aa7.42□□□□□ -1.22
UBFD1-205ENST00000566136 NXT2Q9NPJ8 142 aaKnown RBP7.42□□□□□ -1.22
UBFD1-205ENST00000566136 C8orf17Q9NRJ1 99 aa7.42□□□□□ -1.22
UBFD1-205ENST00000566136 IGLV8-61A0A075B6I0 122 aa7.41□□□□□ -1.22
UBFD1-205ENST00000566136 SPINK8P0C7L1 97 aa7.41□□□□□ -1.22
UBFD1-205ENST00000566136 COX8AP10176 69 aa7.41□□□□□ -1.22
UBFD1-205ENST00000566136 FCER1GP30273 86 aa7.41□□□□□ -1.22
UBFD1-205ENST00000566136 LCA10Q71F78 164 aa7.41□□□□□ -1.22
UBFD1-205ENST00000566136 IGLV2-18A0A075B6J9 118 aa7.41□□□□□ -1.22
UBFD1-205ENST00000566136 A8MWV9 139 aa7.41□□□□□ -1.22
UBFD1-205ENST00000566136 H3BMG7 143 aa7.41□□□□□ -1.22
UBFD1-205ENST00000566136 ASIPP42127 132 aa7.41□□□□□ -1.22
UBFD1-205ENST00000566136 SMIM29Q86T20 159 aa7.41□□□□□ -1.22
UBFD1-205ENST00000566136 Q8N8P6 123 aa7.41□□□□□ -1.22
UBFD1-205ENST00000566136 AGRNO00468 2067 aa7.41□□□□□ -1.22
UBFD1-205ENST00000566136 BVES-AS1Q5T3Y7 98 aa7.4□□□□□ -1.22
UBFD1-205ENST00000566136 C2orf91Q6ZV80 131 aa7.4□□□□□ -1.22
UBFD1-205ENST00000566136 C14orf178Q8N769 122 aaPredicted RBP7.4□□□□□ -1.22
UBFD1-205ENST00000566136 TOMM6Q96B49 74 aa7.4□□□□□ -1.22
UBFD1-205ENST00000566136 IMUPQ9GZP8 106 aa7.4□□□□□ -1.22
UBFD1-205ENST00000566136 PHLDA3Q9Y5J5 127 aa7.4□□□□□ -1.22
UBFD1-205ENST00000566136 LINC01546A6NGU7 62 aa7.4□□□□□ -1.23
UBFD1-205ENST00000566136 IGKV3-20P01619 116 aa7.4□□□□□ -1.23
UBFD1-205ENST00000566136 MGPP08493 103 aa7.4□□□□□ -1.23
UBFD1-205ENST00000566136 ZNF688P0C7X2 276 aa7.4□□□□□ -1.23
UBFD1-205ENST00000566136 MUC4Q99102 2169 aa7.4□□□□□ -1.23
UBFD1-205ENST00000566136 RPL39LQ96EH5 51 aaKnown RBP7.39□□□□□ -1.23
UBFD1-205ENST00000566136 UBE2L6O14933 153 aa7.39□□□□□ -1.23
UBFD1-205ENST00000566136 NMUP48645 174 aa7.39□□□□□ -1.23
UBFD1-205ENST00000566136 PSMG4Q5JS54 123 aa7.39□□□□□ -1.23
UBFD1-205ENST00000566136 RNASE3P12724 160 aaKnown RBP7.38□□□□□ -1.23
UBFD1-205ENST00000566136 RRN3P1Q2M238 152 aa7.38□□□□□ -1.23
UBFD1-205ENST00000566136 DPH3Q96FX2 82 aa7.38□□□□□ -1.23
UBFD1-205ENST00000566136 TRAV12-3A0A0B4J271 114 aa7.38□□□□□ -1.23
UBFD1-205ENST00000566136 FSHBP01225 129 aa7.38□□□□□ -1.23
UBFD1-205ENST00000566136 C7orf33Q8WU49 177 aa7.38□□□□□ -1.23
UBFD1-205ENST00000566136 FAM104AQ969W3 186 aa7.38□□□□□ -1.23
UBFD1-205ENST00000566136 TRAV12-2A0A075B6T6 113 aa7.37□□□□□ -1.23
UBFD1-205ENST00000566136 C18orf65Q6ZTR6 163 aa7.37□□□□□ -1.23
UBFD1-205ENST00000566136 DEFB104AQ8WTQ1 72 aa7.37□□□□□ -1.23
UBFD1-205ENST00000566136 DEFB136Q30KP8 78 aa7.37□□□□□ -1.23
UBFD1-205ENST00000566136 SMIM2Q9BVW6 85 aa7.37□□□□□ -1.23
UBFD1-205ENST00000566136 DPH3P1Q9H4G8 78 aa7.37□□□□□ -1.23
UBFD1-205ENST00000566136 IGKV2D-26A0A0A0MRZ7 120 aa7.36□□□□□ -1.23
UBFD1-205ENST00000566136 P0DMU3 169 aa7.36□□□□□ -1.23
UBFD1-205ENST00000566136 FAM231AP0DMU4 169 aa7.36□□□□□ -1.23
UBFD1-205ENST00000566136 FAM231CP0DMU5 169 aa7.36□□□□□ -1.23
UBFD1-205ENST00000566136 SLC25A29Q8N8R3 303 aa7.36□□□□□ -1.23
UBFD1-205ENST00000566136 TRAV13-1A0A0B4J241 112 aa7.35□□□□□ -1.23
UBFD1-205ENST00000566136 CD7P09564 240 aa7.35□□□□□ -1.23
UBFD1-205ENST00000566136 CXCL5P42830 114 aa7.35□□□□□ -1.23
UBFD1-205ENST00000566136 MYOZ3Q8TDC0 251 aa7.35□□□□□ -1.23
UBFD1-205ENST00000566136 IGKCP01834 107 aa7.35□□□□□ -1.23
UBFD1-205ENST00000566136 SNRPD3P62318 126 aaKnown RBP7.35□□□□□ -1.23
UBFD1-205ENST00000566136 MRPL35Q9NZE8 188 aaKnown RBP7.35□□□□□ -1.23
UBFD1-205ENST00000566136 SPINK13Q1W4C9 94 aa7.34□□□□□ -1.23
UBFD1-205ENST00000566136 LUZP6Q538Z0 58 aa7.34□□□□□ -1.23
UBFD1-205ENST00000566136 SCXQ7RTU7 201 aa7.34□□□□□ -1.23
UBFD1-205ENST00000566136 C16orf95Q9H693 158 aa7.34□□□□□ -1.23
UBFD1-205ENST00000566136 LAMTOR3Q9UHA4 124 aa7.34□□□□□ -1.23
UBFD1-205ENST00000566136 HHLA3Q9XRX5 114 aa7.34□□□□□ -1.23
UBFD1-205ENST00000566136 MGAM2Q2M2H8 2515 aa7.34□□□□□ -1.23
UBFD1-205ENST00000566136 A0A0J9YX75 114 aa7.34□□□□□ -1.24
UBFD1-205ENST00000566136 LGALS3P17931 250 aaKnown RBP7.34□□□□□ -1.24
UBFD1-205ENST00000566136 LINC01554Q52M75 96 aa7.34□□□□□ -1.24
UBFD1-205ENST00000566136 ZC2HC1BQ5TFG8 222 aa7.34□□□□□ -1.24
UBFD1-205ENST00000566136 PKD1L1Q8TDX9 2849 aa7.33□□□□□ -1.24
UBFD1-205ENST00000566136 MDFICQ9P1T7 246 aa7.33□□□□□ -1.24
UBFD1-205ENST00000566136 PRM2P04554 102 aa7.32□□□□□ -1.24
UBFD1-205ENST00000566136 LINC00315P59091 139 aa7.32□□□□□ -1.24
UBFD1-205ENST00000566136 NANOS2P60321 138 aaKnown RBP7.32□□□□□ -1.24
UBFD1-205ENST00000566136 FAM74A4Q5TZK3 123 aa7.32□□□□□ -1.24
UBFD1-205ENST00000566136 CEND1Q8N111 149 aa7.32□□□□□ -1.24
UBFD1-205ENST00000566136 SCGB3A1Q96QR1 104 aa7.32□□□□□ -1.24
UBFD1-205ENST00000566136 KIF25-AS1Q9Y6Z4 181 aa7.32□□□□□ -1.24
UBFD1-205ENST00000566136 TRBV20-1A0A075B6N2 111 aa7.32□□□□□ -1.24
UBFD1-205ENST00000566136 C20orf78Q9BR46 151 aa7.32□□□□□ -1.24
UBFD1-205ENST00000566136 TRRAPQ9Y4A5 3859 aa7.31□□□□□ -1.24
UBFD1-205ENST00000566136 Q8N1X5 172 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 145 ms