RNA–Protein interactions for RNA: ENST00000564333.1

CCNF-204, Transcript of cyclin F, humanhuman

Gene CCNF, Length 1,937 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-204ENST00000564333 TIRAPP58753 221 aa11.74□□□□□ -0.53
CCNF-204ENST00000564333 COPS9Q8WXC6 57 aa11.74□□□□□ -0.53
CCNF-204ENST00000564333 TRBV6-4A0A1B0GX49 114 aa11.74□□□□□ -0.53
CCNF-204ENST00000564333 H7C2G1 150 aa11.74□□□□□ -0.53
CCNF-204ENST00000564333 PRSS2P07478 247 aa11.74□□□□□ -0.53
CCNF-204ENST00000564333 XGP55808 180 aa11.74□□□□□ -0.53
CCNF-204ENST00000564333 TRGV4A0A0C4DH28 118 aa11.73□□□□□ -0.53
CCNF-204ENST00000564333 MT-ATP8P03928 68 aa11.73□□□□□ -0.53
CCNF-204ENST00000564333 TEP1Q99973 2627 aaKnown RBP11.73□□□□□ -0.53
CCNF-204ENST00000564333 IGLV5-45A0A087WSX0 123 aa11.72□□□□□ -0.53
CCNF-204ENST00000564333 LOC100131303A0A0U1RQF7 123 aa11.72□□□□□ -0.53
CCNF-204ENST00000564333 CIRBPQ14011 172 aaKnown RBP11.72□□□□□ -0.53
CCNF-204ENST00000564333 C9orf66Q5T8R8 295 aa11.72□□□□□ -0.53
CCNF-204ENST00000564333 CSDC2Q9Y534 153 aaKnown RBP11.72□□□□□ -0.53
CCNF-204ENST00000564333 ICOSQ9Y6W8 199 aa11.72□□□□□ -0.53
CCNF-204ENST00000564333 H3BT86 120 aa11.72□□□□□ -0.53
CCNF-204ENST00000564333 TRIAP1O43715 76 aa11.72□□□□□ -0.53
CCNF-204ENST00000564333 CRLF1O75462 422 aa11.72□□□□□ -0.53
CCNF-204ENST00000564333 SPATA3Q8NHX4 192 aa11.72□□□□□ -0.53
CCNF-204ENST00000564333 JMJD1CQ15652 2540 aa11.72□□□□□ -0.53
CCNF-204ENST00000564333 TMEM243Q9BU79 118 aa11.71□□□□□ -0.53
CCNF-204ENST00000564333 CDKN2A-AS1Q9UH64 79 aa11.71□□□□□ -0.53
CCNF-204ENST00000564333 UBE2L6O14933 153 aa11.7□□□□□ -0.54
CCNF-204ENST00000564333 NDUFA1O15239 70 aa11.7□□□□□ -0.54
CCNF-204ENST00000564333 NIPBLQ6KC79 2804 aaeCLIP11.7□□□□□ -0.54
CCNF-204ENST00000564333 A8MZ25 164 aa11.7□□□□□ -0.54
CCNF-204ENST00000564333 HERVK_113P63121 156 aa11.7□□□□□ -0.54
CCNF-204ENST00000564333 FHL2Q14192 279 aa11.7□□□□□ -0.54
CCNF-204ENST00000564333 FAM19A3Q7Z5A8 133 aa11.69□□□□□ -0.54
CCNF-204ENST00000564333 COX6A2Q02221 97 aa11.68□□□□□ -0.54
CCNF-204ENST00000564333 LINC00242Q5T6M2 205 aa11.68□□□□□ -0.54
CCNF-204ENST00000564333 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.68□□□□□ -0.54
CCNF-204ENST00000564333 NTN5Q8WTR8 489 aaPredicted RBP11.68□□□□□ -0.54
CCNF-204ENST00000564333 NSD1Q96L73 2696 aaPredicted RBP11.68□□□□□ -0.54
CCNF-204ENST00000564333 ADAMTSL4-AS1Q5T5F5 129 aa11.68□□□□□ -0.54
CCNF-204ENST00000564333 KIR2DL5BQ8NHK3 375 aa11.68□□□□□ -0.54
CCNF-204ENST00000564333 UBE2WQ96B02 151 aa11.68□□□□□ -0.54
CCNF-204ENST00000564333 CDC42SE2Q9NRR3 84 aa11.68□□□□□ -0.54
CCNF-204ENST00000564333 TMEM101Q96IK0 257 aa11.67□□□□□ -0.54
CCNF-204ENST00000564333 TRAV13-1A0A0B4J241 112 aa11.66□□□□□ -0.54
CCNF-204ENST00000564333 SNCGO76070 127 aa11.66□□□□□ -0.54
CCNF-204ENST00000564333 C2orf82Q6UX34 121 aa11.66□□□□□ -0.54
CCNF-204ENST00000564333 LINC00612Q8N6U2 182 aa11.66□□□□□ -0.54
CCNF-204ENST00000564333 X6R8D5 127 aa11.66□□□□□ -0.54
CCNF-204ENST00000564333 NOTCH3Q9UM47 2321 aa11.66□□□□□ -0.54
CCNF-204ENST00000564333 TRAV8-4A0A0B4J246 113 aa11.66□□□□□ -0.54
CCNF-204ENST00000564333 H7C423 109 aa11.66□□□□□ -0.54
CCNF-204ENST00000564333 DEFB130BP0DP73 79 aa11.66□□□□□ -0.54
CCNF-204ENST00000564333 DEFB130AP0DP74 79 aa11.66□□□□□ -0.54
CCNF-204ENST00000564333 MRPL23Q16540 153 aaKnown RBP11.66□□□□□ -0.54
CCNF-204ENST00000564333 PPDPFQ9H3Y8 114 aa11.66□□□□□ -0.54
CCNF-204ENST00000564333 CITED1Q99966 193 aa11.65□□□□□ -0.54
CCNF-204ENST00000564333 IGLV5-39A0A0G2JS06 123 aa11.64□□□□□ -0.55
CCNF-204ENST00000564333 LST1O00453 97 aa11.64□□□□□ -0.55
CCNF-204ENST00000564333 Q6Q795 121 aa11.64□□□□□ -0.55
CCNF-204ENST00000564333 SMIM9A6NGZ8 99 aa11.64□□□□□ -0.55
CCNF-204ENST00000564333 FAM240AA0A1B0GVK7 77 aa11.63□□□□□ -0.55
CCNF-204ENST00000564333 TRBV6-8A0A0A6YYG3 113 aa11.62□□□□□ -0.55
CCNF-204ENST00000564333 SMIM1B2RUZ4 78 aa11.62□□□□□ -0.55
CCNF-204ENST00000564333 GAGE2BQ13066 116 aa11.62□□□□□ -0.55
CCNF-204ENST00000564333 GAGE6Q13070 117 aa11.62□□□□□ -0.55
CCNF-204ENST00000564333 GAGE2EQ4V326 116 aa11.62□□□□□ -0.55
CCNF-204ENST00000564333 GAGE2DQ9UEU5 116 aa11.62□□□□□ -0.55
CCNF-204ENST00000564333 FN1P02751 2386 aaKnown RBP11.62□□□□□ -0.55
CCNF-204ENST00000564333 C2CD3Q4AC94 2353 aa11.62□□□□□ -0.55
CCNF-204ENST00000564333 ANAPC13Q9BS18 74 aa11.62□□□□□ -0.55
CCNF-204ENST00000564333 HERV-K104P63124 156 aa11.61□□□□□ -0.55
CCNF-204ENST00000564333 DEFB121Q5J5C9 76 aa11.61□□□□□ -0.55
CCNF-204ENST00000564333 TEX49A0A1B0GTD5 131 aa11.6□□□□□ -0.55
CCNF-204ENST00000564333 F5H768 121 aa11.6□□□□□ -0.55
CCNF-204ENST00000564333 APOC4P55056 127 aa11.6□□□□□ -0.55
CCNF-204ENST00000564333 DEFB135Q30KP9 77 aa11.6□□□□□ -0.55
CCNF-204ENST00000564333 CHCHD5Q9BSY4 110 aa11.6□□□□□ -0.55
CCNF-204ENST00000564333 LINC00308Q8TCZ7 52 aa11.59□□□□□ -0.55
CCNF-204ENST00000564333 Q9H8V8 135 aa11.59□□□□□ -0.55
CCNF-204ENST00000564333 GYPEP15421 78 aa11.58□□□□□ -0.55
CCNF-204ENST00000564333 NPC2P61916 151 aa11.58□□□□□ -0.55
CCNF-204ENST00000564333 FAM222AQ5U5X8 452 aa11.58□□□□□ -0.55
CCNF-204ENST00000564333 TRAV26-1A0A087WT03 109 aa11.58□□□□□ -0.56
CCNF-204ENST00000564333 LYRM9A8MSI8 78 aa11.58□□□□□ -0.56
CCNF-204ENST00000564333 IGLV4-60A0A075B6I1 120 aa11.57□□□□□ -0.56
CCNF-204ENST00000564333 ACYP1P07311 99 aa11.56□□□□□ -0.56
CCNF-204ENST00000564333 DAND5Q8N907 189 aa11.56□□□□□ -0.56
CCNF-204ENST00000564333 PRO0255Q9UI72 69 aa11.56□□□□□ -0.56
CCNF-204ENST00000564333 IGKV3OR2-268A0A0C4DH90 116 aa11.55□□□□□ -0.56
CCNF-204ENST00000564333 COX7A2LO14548 114 aa11.55□□□□□ -0.56
CCNF-204ENST00000564333 TTC32Q5I0X7 151 aa11.55□□□□□ -0.56
CCNF-204ENST00000564333 CLEC2BQ92478 149 aa11.55□□□□□ -0.56
CCNF-204ENST00000564333 PRIMA1Q86XR5 153 aa11.54□□□□□ -0.56
CCNF-204ENST00000564333 ZNF625Q96I27 306 aaPredicted RBP11.54□□□□□ -0.56
CCNF-204ENST00000564333 IGHV4-28A0A0C4DH34 117 aa11.54□□□□□ -0.56
CCNF-204ENST00000564333 DEFB4AO15263 64 aa11.54□□□□□ -0.56
CCNF-204ENST00000564333 NDUFV3P56181 108 aaKnown RBP11.53□□□□□ -0.56
CCNF-204ENST00000564333 MEIG1Q5JSS6 88 aa11.53□□□□□ -0.56
CCNF-204ENST00000564333 SHISA2Q6UWI4 295 aa11.53□□□□□ -0.56
CCNF-204ENST00000564333 C15orf53Q8NAA6 179 aa11.53□□□□□ -0.56
CCNF-204ENST00000564333 WFDC9Q8NEX5 89 aa11.52□□□□□ -0.56
CCNF-204ENST00000564333 TRACP01848 142 aa11.52□□□□□ -0.57
CCNF-204ENST00000564333 PAX4O43316 350 aa11.51□□□□□ -0.57
CCNF-204ENST00000564333 WIPF1O43516 503 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms