RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 TIMM21Q9BVV7 248 aa8.3□□□□□ -1.08
PCAT1-202ENST00000561978 NOP10Q9NPE3 64 aaKnown RBP8.3□□□□□ -1.08
PCAT1-202ENST00000561978 NBEAL2Q6ZNJ1 2754 aa8.29□□□□□ -1.08
PCAT1-202ENST00000561978 A0A0J9YXV3 536 aa8.29□□□□□ -1.08
PCAT1-202ENST00000561978 NHLRC4P0CG21 123 aaPredicted RBP8.29□□□□□ -1.08
PCAT1-202ENST00000561978 ZNF22P17026 224 aaPredicted RBP8.29□□□□□ -1.08
PCAT1-202ENST00000561978 CSNK1G2-AS1Q8NCQ2 148 aa8.29□□□□□ -1.08
PCAT1-202ENST00000561978 PHLDA1Q8WV24 401 aaPredicted RBP8.29□□□□□ -1.08
PCAT1-202ENST00000561978 SPANXB1Q9NS25 103 aaPredicted RBP8.29□□□□□ -1.08
PCAT1-202ENST00000561978 Q9UF83 564 aa8.29□□□□□ -1.08
PCAT1-202ENST00000561978 COL7A1Q02388 2944 aa8.29□□□□□ -1.08
PCAT1-202ENST00000561978 A0A0J9YY99 117 aa8.28□□□□□ -1.08
PCAT1-202ENST00000561978 A0A1B0GWB2 263 aa8.28□□□□□ -1.08
PCAT1-202ENST00000561978 K7EIL1 84 aa8.28□□□□□ -1.08
PCAT1-202ENST00000561978 MALP21145 153 aa8.28□□□□□ -1.08
PCAT1-202ENST00000561978 DGAT2L7PQ6IED9 249 aa8.28□□□□□ -1.08
PCAT1-202ENST00000561978 SLC25A29Q8N8R3 303 aa8.28□□□□□ -1.08
PCAT1-202ENST00000561978 WFDC10AQ9H1F0 79 aa8.28□□□□□ -1.08
PCAT1-202ENST00000561978 TRGV2A0A075B6R0 118 aa8.27□□□□□ -1.09
PCAT1-202ENST00000561978 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.27□□□□□ -1.09
PCAT1-202ENST00000561978 IGHV3-38A0A0C4DH36 116 aa8.27□□□□□ -1.09
PCAT1-202ENST00000561978 IGKV2-29A2NJV5 120 aaPredicted RBP8.27□□□□□ -1.09
PCAT1-202ENST00000561978 DEFB121Q5J5C9 76 aa8.27□□□□□ -1.09
PCAT1-202ENST00000561978 FAM104AQ969W3 186 aa8.27□□□□□ -1.09
PCAT1-202ENST00000561978 SPCS1Q9Y6A9 102 aa8.27□□□□□ -1.09
PCAT1-202ENST00000561978 K7ERJ3 54 aa8.26□□□□□ -1.09
PCAT1-202ENST00000561978 TMEM101Q96IK0 257 aa8.26□□□□□ -1.09
PCAT1-202ENST00000561978 NAA38Q9BRA0 125 aaKnown RBP8.26□□□□□ -1.09
PCAT1-202ENST00000561978 TRBV6-4A0A1B0GX49 114 aa8.26□□□□□ -1.09
PCAT1-202ENST00000561978 PLAC8L1A1L4L8 177 aa8.26□□□□□ -1.09
PCAT1-202ENST00000561978 IGLL5B9A064 214 aa8.26□□□□□ -1.09
PCAT1-202ENST00000561978 CCDC179H3BU77 68 aa8.26□□□□□ -1.09
PCAT1-202ENST00000561978 TSPEAR-AS2P59090 65 aa8.26□□□□□ -1.09
PCAT1-202ENST00000561978 CEMP1Q6PRD7 247 aaPredicted RBP8.26□□□□□ -1.09
PCAT1-202ENST00000561978 UBE2D3P61077 147 aa8.25□□□□□ -1.09
PCAT1-202ENST00000561978 UBE2D2P62837 147 aa8.25□□□□□ -1.09
PCAT1-202ENST00000561978 C9JAW5 83 aa8.24□□□□□ -1.09
PCAT1-202ENST00000561978 DNAH9Q9NYC9 4486 aa8.24□□□□□ -1.09
PCAT1-202ENST00000561978 IGHV1-58A0A0C4DH39 117 aa8.24□□□□□ -1.09
PCAT1-202ENST00000561978 Q6ZUT4 128 aa8.24□□□□□ -1.09
PCAT1-202ENST00000561978 TRGV4A0A0C4DH28 118 aa8.23□□□□□ -1.09
PCAT1-202ENST00000561978 H7C423 109 aa8.23□□□□□ -1.09
PCAT1-202ENST00000561978 IGHV3-30P01768 117 aa8.23□□□□□ -1.09
PCAT1-202ENST00000561978 IGHV3-30-3P0DP02 117 aa8.23□□□□□ -1.09
PCAT1-202ENST00000561978 IGHV3-30-5P0DP03 117 aa8.23□□□□□ -1.09
PCAT1-202ENST00000561978 UBE2D1P51668 147 aa8.23□□□□□ -1.09
PCAT1-202ENST00000561978 LINC00336Q6ZUF6 198 aa8.23□□□□□ -1.09
PCAT1-202ENST00000561978 GAGE13Q4V321 117 aa8.22□□□□□ -1.09
PCAT1-202ENST00000561978 TENM3Q9P273 2699 aa8.22□□□□□ -1.09
PCAT1-202ENST00000561978 XGP55808 180 aa8.22□□□□□ -1.09
PCAT1-202ENST00000561978 HERVK_113P63121 156 aa8.22□□□□□ -1.09
PCAT1-202ENST00000561978 RNASE13Q5GAN3 156 aaKnown RBP8.22□□□□□ -1.09
PCAT1-202ENST00000561978 FAM19A3Q7Z5A8 133 aa8.22□□□□□ -1.09
PCAT1-202ENST00000561978 IGHV3-64A0A075B6Q5 118 aa8.21□□□□□ -1.09
PCAT1-202ENST00000561978 UBE2L6O14933 153 aa8.21□□□□□ -1.09
PCAT1-202ENST00000561978 IGHV4-30-4P0DP06 118 aa8.21□□□□□ -1.09
PCAT1-202ENST00000561978 NDUFV3P56181 108 aaKnown RBP8.21□□□□□ -1.09
PCAT1-202ENST00000561978 VSIG2Q96IQ7 327 aa8.21□□□□□ -1.09
PCAT1-202ENST00000561978 STAB2Q8WWQ8 2551 aa8.21□□□□□ -1.1
PCAT1-202ENST00000561978 IGLV5-45A0A087WSX0 123 aa8.21□□□□□ -1.1
PCAT1-202ENST00000561978 MEIG1Q5JSS6 88 aa8.21□□□□□ -1.1
PCAT1-202ENST00000561978 NTM-AS1Q6ZSK4 140 aa8.21□□□□□ -1.1
PCAT1-202ENST00000561978 SBSPONQ8IVN8 264 aa8.21□□□□□ -1.1
PCAT1-202ENST00000561978 TMEM243Q9BU79 118 aa8.21□□□□□ -1.1
PCAT1-202ENST00000561978 F8W1H4 67 aa8.2□□□□□ -1.1
PCAT1-202ENST00000561978 CDIP1Q9H305 208 aa8.2□□□□□ -1.1
PCAT1-202ENST00000561978 A0A0J9YXY3 114 aa8.19□□□□□ -1.1
PCAT1-202ENST00000561978 MT-ATP8P03928 68 aa8.19□□□□□ -1.1
PCAT1-202ENST00000561978 LINC00694P0DN24 101 aa8.19□□□□□ -1.1
PCAT1-202ENST00000561978 FHL2Q14192 279 aa8.19□□□□□ -1.1
PCAT1-202ENST00000561978 LYRM7Q5U5X0 104 aa8.19□□□□□ -1.1
PCAT1-202ENST00000561978 HUWE1Q7Z6Z7 4374 aaKnown RBP8.19□□□□□ -1.1
PCAT1-202ENST00000561978 TRAV8-3A0A0A6YYJ7 113 aa8.19□□□□□ -1.1
PCAT1-202ENST00000561978 C4orf26Q17RF5 130 aa8.19□□□□□ -1.1
PCAT1-202ENST00000561978 Q6Q795 121 aa8.19□□□□□ -1.1
PCAT1-202ENST00000561978 C10orf126Q8N4M7 172 aa8.19□□□□□ -1.1
PCAT1-202ENST00000561978 CDC42SE2Q9NRR3 84 aa8.19□□□□□ -1.1
PCAT1-202ENST00000561978 NDUFA12Q9UI09 145 aa8.19□□□□□ -1.1
PCAT1-202ENST00000561978 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.18□□□□□ -1.1
PCAT1-202ENST00000561978 APOMO95445 188 aa8.18□□□□□ -1.1
PCAT1-202ENST00000561978 LINC00612Q8N6U2 182 aa8.18□□□□□ -1.1
PCAT1-202ENST00000561978 CFC1BP0CG36 223 aa8.17□□□□□ -1.1
PCAT1-202ENST00000561978 CFC1P0CG37 223 aa8.17□□□□□ -1.1
PCAT1-202ENST00000561978 APOC4P55056 127 aa8.17□□□□□ -1.1
PCAT1-202ENST00000561978 CDKN2A-AS1Q9UH64 79 aa8.17□□□□□ -1.1
PCAT1-202ENST00000561978 PRO1854Q9UHT4 67 aa8.17□□□□□ -1.1
PCAT1-202ENST00000561978 TIMM17BO60830 172 aa8.17□□□□□ -1.1
PCAT1-202ENST00000561978 LINC00242Q5T6M2 205 aa8.17□□□□□ -1.1
PCAT1-202ENST00000561978 LOC107984640A0A0U1RRK4 108 aa8.16□□□□□ -1.1
PCAT1-202ENST00000561978 IFITM1P13164 125 aa8.16□□□□□ -1.1
PCAT1-202ENST00000561978 MUSTN1Q8IVN3 82 aa8.16□□□□□ -1.1
PCAT1-202ENST00000561978 ATP6V0E2Q8NHE4 81 aa8.16□□□□□ -1.1
PCAT1-202ENST00000561978 SPANXDQ9BXN6 97 aa8.16□□□□□ -1.1
PCAT1-202ENST00000561978 TRBV6-8A0A0A6YYG3 113 aa8.15□□□□□ -1.1
PCAT1-202ENST00000561978 A0A0B4J2C4 111 aa8.15□□□□□ -1.1
PCAT1-202ENST00000561978 LYRM9A8MSI8 78 aa8.15□□□□□ -1.1
PCAT1-202ENST00000561978 DEFB130BP0DP73 79 aa8.15□□□□□ -1.1
PCAT1-202ENST00000561978 DEFB130AP0DP74 79 aa8.15□□□□□ -1.1
PCAT1-202ENST00000561978 CIRBPQ14011 172 aaKnown RBP8.15□□□□□ -1.1
PCAT1-202ENST00000561978 X6R8D5 127 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms