RNA–Protein interactions for RNA: ENST00000560867.1

HMG20A-211, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-211ENST00000560867 ANKRD36BQ8N2N9 1353 aa0.89□□□□□ -2.27
HMG20A-211ENST00000560867 TRAV22A0A0B4J277 110 aa0.89□□□□□ -2.27
HMG20A-211ENST00000560867 PPP1R17O96001 155 aa0.89□□□□□ -2.27
HMG20A-211ENST00000560867 SEC11AP67812 179 aa0.89□□□□□ -2.27
HMG20A-211ENST00000560867 LINC00575Q6W349 94 aa0.89□□□□□ -2.27
HMG20A-211ENST00000560867 FAM167A-AS1Q96KT0 104 aa0.89□□□□□ -2.27
HMG20A-211ENST00000560867 PMCHL2Q9BQD1 86 aa0.89□□□□□ -2.27
HMG20A-211ENST00000560867 WFDC6Q9BQY6 131 aa0.89□□□□□ -2.27
HMG20A-211ENST00000560867 Q9H521 79 aa0.89□□□□□ -2.27
HMG20A-211ENST00000560867 NPVFQ9HCQ7 196 aa0.89□□□□□ -2.27
HMG20A-211ENST00000560867 SCP2D1Q9UJQ7 156 aa0.89□□□□□ -2.27
HMG20A-211ENST00000560867 LENEPQ9Y5L5 61 aa0.89□□□□□ -2.27
HMG20A-211ENST00000560867 LAMA3Q16787 3333 aa0.89□□□□□ -2.27
HMG20A-211ENST00000560867 CDK13Q14004 1512 aaKnown RBP0.89□□□□□ -2.27
HMG20A-211ENST00000560867 NSD3Q9BZ95 1437 aa0.89□□□□□ -2.27
HMG20A-211ENST00000560867 FSIP2Q5CZC0 6907 aa0.88□□□□□ -2.27
HMG20A-211ENST00000560867 SPAG17Q6Q759 2223 aa0.88□□□□□ -2.27
HMG20A-211ENST00000560867 ZGRF1Q86YA3 2104 aa0.88□□□□□ -2.27
HMG20A-211ENST00000560867 PXDNQ92626 1479 aa0.88□□□□□ -2.27
HMG20A-211ENST00000560867 C10orf142B7Z368 130 aa0.88□□□□□ -2.27
HMG20A-211ENST00000560867 CHKB-CPT1BH3BT56 60 aa0.88□□□□□ -2.27
HMG20A-211ENST00000560867 CCL18P55774 89 aa0.88□□□□□ -2.27
HMG20A-211ENST00000560867 KRTDAPP60985 99 aa0.88□□□□□ -2.27
HMG20A-211ENST00000560867 UBE2D3P61077 147 aa0.88□□□□□ -2.27
HMG20A-211ENST00000560867 UBE2D2P62837 147 aa0.88□□□□□ -2.27
HMG20A-211ENST00000560867 PLAC4Q8WY50 150 aa0.88□□□□□ -2.27
HMG20A-211ENST00000560867 BPESC1Q9GZL8 116 aa0.88□□□□□ -2.27
HMG20A-211ENST00000560867 DYNLRB1Q9NP97 96 aa0.88□□□□□ -2.27
HMG20A-211ENST00000560867 MANBALQ9NQG1 85 aa0.88□□□□□ -2.27
HMG20A-211ENST00000560867 CDC42SE2Q9NRR3 84 aa0.88□□□□□ -2.27
HMG20A-211ENST00000560867 TULP4Q9NRJ4 1543 aa0.88□□□□□ -2.27
HMG20A-211ENST00000560867 NSD1Q96L73 2696 aaPredicted RBP0.88□□□□□ -2.27
HMG20A-211ENST00000560867 KIAA0100Q14667 2235 aaKnown RBP0.88□□□□□ -2.27
HMG20A-211ENST00000560867 LAMC3Q9Y6N6 1575 aa0.87□□□□□ -2.27
HMG20A-211ENST00000560867 MAGI1Q96QZ7 1491 aaPredicted RBP0.87□□□□□ -2.27
HMG20A-211ENST00000560867 FYCO1Q9BQS8 1478 aa0.87□□□□□ -2.27
HMG20A-211ENST00000560867 XIRP2A4UGR9 3374 aa0.87□□□□□ -2.27
HMG20A-211ENST00000560867 TENM3Q9P273 2699 aa0.87□□□□□ -2.27
HMG20A-211ENST00000560867 ABCA3Q99758 1704 aa0.87□□□□□ -2.27
HMG20A-211ENST00000560867 TNS1Q9HBL0 1735 aaKnown RBP0.87□□□□□ -2.27
HMG20A-211ENST00000560867 NRXN2Q9P2S2 1712 aa0.87□□□□□ -2.27
HMG20A-211ENST00000560867 PTPRQQ9UMZ3 2332 aa0.87□□□□□ -2.27
HMG20A-211ENST00000560867 SHROOM2Q13796 1616 aa0.87□□□□□ -2.27
HMG20A-211ENST00000560867 A0A096LNT2 108 aa0.87□□□□□ -2.27
HMG20A-211ENST00000560867 CRYM-AS1A6NIL9 109 aa0.87□□□□□ -2.27
HMG20A-211ENST00000560867 HMGN4O00479 90 aa0.87□□□□□ -2.27
HMG20A-211ENST00000560867 SFT2D2O95562 160 aa0.87□□□□□ -2.27
HMG20A-211ENST00000560867 SPAG11BQ08648 103 aa0.87□□□□□ -2.27
HMG20A-211ENST00000560867 SPAG11AQ6PDA7 123 aa0.87□□□□□ -2.27
HMG20A-211ENST00000560867 Q8N6K4 173 aa0.87□□□□□ -2.27
HMG20A-211ENST00000560867 PRO1933Q9H354 126 aa0.87□□□□□ -2.27
HMG20A-211ENST00000560867 PRDM15P57071 1507 aaPredicted RBP0.87□□□□□ -2.27
HMG20A-211ENST00000560867 ABCA13Q86UQ4 5058 aa0.87□□□□□ -2.27
HMG20A-211ENST00000560867 WDR87Q6ZQQ6 2873 aa0.87□□□□□ -2.27
HMG20A-211ENST00000560867 SYNE2Q8WXH0 6885 aaKnown RBP0.87□□□□□ -2.27
HMG20A-211ENST00000560867 NUP188Q5SRE5 1749 aa0.86□□□□□ -2.27
HMG20A-211ENST00000560867 DMBT1Q9UGM3 2413 aaPredicted RBP0.86□□□□□ -2.27
HMG20A-211ENST00000560867 NEBP20929 6669 aa0.86□□□□□ -2.27
HMG20A-211ENST00000560867 BSNQ9UPA5 3926 aa0.86□□□□□ -2.27
HMG20A-211ENST00000560867 SHPRHQ149N8 1683 aa0.86□□□□□ -2.27
HMG20A-211ENST00000560867 TRGV1A0A0A0MS02 117 aa0.86□□□□□ -2.27
HMG20A-211ENST00000560867 TRBV7-7A0A0K0K1E9 115 aa0.86□□□□□ -2.27
HMG20A-211ENST00000560867 M0R135 149 aa0.86□□□□□ -2.27
HMG20A-211ENST00000560867 LY6G6CO95867 125 aa0.86□□□□□ -2.27
HMG20A-211ENST00000560867 PYY3Q5JQD4 70 aa0.86□□□□□ -2.27
HMG20A-211ENST00000560867 SFTA2Q6UW10 78 aa0.86□□□□□ -2.27
HMG20A-211ENST00000560867 PRO3102Q9H379 93 aa0.86□□□□□ -2.27
HMG20A-211ENST00000560867 PRO1854Q9UHT4 67 aa0.86□□□□□ -2.27
HMG20A-211ENST00000560867 CACNA1HO95180 2353 aa0.86□□□□□ -2.27
HMG20A-211ENST00000560867 PRUNE2Q8WUY3 3088 aa0.86□□□□□ -2.27
HMG20A-211ENST00000560867 MEGF8Q7Z7M0 2845 aa0.86□□□□□ -2.27
HMG20A-211ENST00000560867 RGPD1P0DJD0 1748 aa0.86□□□□□ -2.27
HMG20A-211ENST00000560867 SMG1Q96Q15 3661 aaKnown RBP0.86□□□□□ -2.27
HMG20A-211ENST00000560867 MRC1P22897 1456 aa0.86□□□□□ -2.27
HMG20A-211ENST00000560867 LRRC37A3O60309 1634 aa0.86□□□□□ -2.27
HMG20A-211ENST00000560867 MAP3K4Q9Y6R4 1608 aa0.86□□□□□ -2.27
HMG20A-211ENST00000560867 DNAH14Q0VDD8 3507 aa0.85□□□□□ -2.27
HMG20A-211ENST00000560867 NF1P21359 2839 aa0.85□□□□□ -2.27
HMG20A-211ENST00000560867 ZMYM4Q5VZL5 1548 aa0.85□□□□□ -2.27
HMG20A-211ENST00000560867 PATJQ8NI35 1801 aa0.85□□□□□ -2.27
HMG20A-211ENST00000560867 PHIPQ8WWQ0 1821 aa0.85□□□□□ -2.27
HMG20A-211ENST00000560867 SNRNP200O75643 2136 aaKnown RBP0.85□□□□□ -2.27
HMG20A-211ENST00000560867 IGLC7A0M8Q6 106 aa0.85□□□□□ -2.27
HMG20A-211ENST00000560867 ATOX1O00244 68 aa0.85□□□□□ -2.27
HMG20A-211ENST00000560867 APOC3P02656 99 aa0.85□□□□□ -2.27
HMG20A-211ENST00000560867 GLI2P10070 1586 aa0.85□□□□□ -2.27
HMG20A-211ENST00000560867 ASIPP42127 132 aa0.85□□□□□ -2.27
HMG20A-211ENST00000560867 DOCK1Q14185 1865 aa0.85□□□□□ -2.27
HMG20A-211ENST00000560867 SERP2Q8N6R1 65 aa0.85□□□□□ -2.27
HMG20A-211ENST00000560867 CELSR2Q9HCU4 2923 aa0.85□□□□□ -2.27
HMG20A-211ENST00000560867 FAIMQ9NVQ4 179 aa0.85□□□□□ -2.27
HMG20A-211ENST00000560867 UQCR10Q9UDW1 63 aa0.85□□□□□ -2.27
HMG20A-211ENST00000560867 R4GMQ9 66 aa0.85□□□□□ -2.27
HMG20A-211ENST00000560867 V9GYH0 126 aa0.85□□□□□ -2.27
HMG20A-211ENST00000560867 SCRIBQ14160 1630 aa0.85□□□□□ -2.27
HMG20A-211ENST00000560867 HERC1Q15751 4861 aa0.84□□□□□ -2.27
HMG20A-211ENST00000560867 CSPG4Q6UVK1 2322 aa0.84□□□□□ -2.27
HMG20A-211ENST00000560867 KIAA0586Q9BVV6 1533 aa0.84□□□□□ -2.27
HMG20A-211ENST00000560867 MED12Q93074 2177 aa0.84□□□□□ -2.27
HMG20A-211ENST00000560867 PEAK1Q9H792 1746 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms