RNA–Protein interactions for RNA: ENST00000560867.1

HMG20A-211, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-211ENST00000560867 AEBP2Q6ZN18 517 aaPredicted RBP25.44■■□□□ 1.66
HMG20A-211ENST00000560867 CHIC1Q5VXU3 224 aa25.24■■□□□ 1.63
HMG20A-211ENST00000560867 PHF23Q9BUL5 403 aaPredicted RBP22.1■■□□□ 1.13
HMG20A-211ENST00000560867 SENP3Q9H4L4 574 aaPredicted RBP21.76■■□□□ 1.07
HMG20A-211ENST00000560867 PLPPR3Q6T4P5 718 aa20.65■□□□□ 0.9
HMG20A-211ENST00000560867 FOXD1Q16676 465 aa20.01■□□□□ 0.79
HMG20A-211ENST00000560867 ADRA2BP18089 450 aa19.36■□□□□ 0.69
HMG20A-211ENST00000560867 PPP6R1Q9UPN7 881 aa19.36■□□□□ 0.69
HMG20A-211ENST00000560867 PIAS4Q8N2W9 510 aaPredicted RBP18.97■□□□□ 0.63
HMG20A-211ENST00000560867 MSH5O43196 834 aa18.54■□□□□ 0.56
HMG20A-211ENST00000560867 PPP4R3CPQ6ZMV5 832 aa18.14■□□□□ 0.49
HMG20A-211ENST00000560867 SCAF1Q9H7N4 1312 aaKnown RBP17.98■□□□□ 0.47
HMG20A-211ENST00000560867 KCNA4P22459 653 aa17.92■□□□□ 0.46
HMG20A-211ENST00000560867 NCBP3Q53F19 620 aaKnown RBP17.87■□□□□ 0.45
HMG20A-211ENST00000560867 CNKSR2Q8WXI2 1034 aa17.66■□□□□ 0.42
HMG20A-211ENST00000560867 NPM3O75607 178 aaKnown RBP17.46■□□□□ 0.39
HMG20A-211ENST00000560867 MAPK8IP2Q13387 824 aaPredicted RBP17.44■□□□□ 0.38
HMG20A-211ENST00000560867 DMRT2Q9Y5R5 561 aa17.37■□□□□ 0.37
HMG20A-211ENST00000560867 RNF216Q9NWF9 866 aaPredicted RBP17.27■□□□□ 0.36
HMG20A-211ENST00000560867 DNAJC5BQ9UF47 199 aa17.19■□□□□ 0.34
HMG20A-211ENST00000560867 SLC4A1APQ9BWU0 796 aaKnown RBP17.18■□□□□ 0.34
HMG20A-211ENST00000560867 HOXD11P31277 338 aaPredicted RBP17.13■□□□□ 0.33
HMG20A-211ENST00000560867 EHMT2Q96KQ7 1210 aa16.83■□□□□ 0.28
HMG20A-211ENST00000560867 CSRNP3Q8WYN3 585 aa16.6■□□□□ 0.25
HMG20A-211ENST00000560867 FOXD4L1Q9NU39 408 aa16.55■□□□□ 0.24
HMG20A-211ENST00000560867 ZBTB22O15209 634 aa16.46■□□□□ 0.23
HMG20A-211ENST00000560867 DCAF8L1A6NGE4 600 aa16.45■□□□□ 0.22
HMG20A-211ENST00000560867 SLC4A2P04920 1241 aa16.4■□□□□ 0.22
HMG20A-211ENST00000560867 POTEDQ86YR6 584 aa16.29■□□□□ 0.2
HMG20A-211ENST00000560867 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.25■□□□□ 0.19
HMG20A-211ENST00000560867 MYCNP04198 464 aaPredicted RBP16.24■□□□□ 0.19
HMG20A-211ENST00000560867 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.08■□□□□ 0.16
HMG20A-211ENST00000560867 HNRNPUL2Q1KMD3 747 aaKnown RBP16.08■□□□□ 0.16
HMG20A-211ENST00000560867 ATXN8OSP0DMR3 200 aa16.07■□□□□ 0.16
HMG20A-211ENST00000560867 U3KPZ7 1027 aaPredicted RBP16■□□□□ 0.15
HMG20A-211ENST00000560867 SAMD1Q6SPF0 538 aaPredicted RBP15.98■□□□□ 0.15
HMG20A-211ENST00000560867 APLP2Q06481 763 aa15.9■□□□□ 0.14
HMG20A-211ENST00000560867 RNF39Q9H2S5 420 aa15.83■□□□□ 0.12
HMG20A-211ENST00000560867 C1QBPQ07021 282 aaKnown RBP15.73■□□□□ 0.11
HMG20A-211ENST00000560867 ATF5Q9Y2D1 282 aaPredicted RBP15.56■□□□□ 0.08
HMG20A-211ENST00000560867 ZNF219Q9P2Y4 722 aaPredicted RBP15.53■□□□□ 0.08
HMG20A-211ENST00000560867 SPINK5Q9NQ38 1064 aaPredicted RBP15.4■□□□□ 0.06
HMG20A-211ENST00000560867 CAPN15O75808 1086 aa15.39■□□□□ 0.05
HMG20A-211ENST00000560867 TRHP20396 242 aaPredicted RBP15.33■□□□□ 0.04
HMG20A-211ENST00000560867 CACNB1Q02641 598 aaPredicted RBP15.19■□□□□ 0.02
HMG20A-211ENST00000560867 POLA2Q14181 598 aa15.18■□□□□ 0.02
HMG20A-211ENST00000560867 ZBTB12Q9Y330 459 aaPredicted RBP15.17■□□□□ 0.02
HMG20A-211ENST00000560867 DSG3P32926 999 aa15.11■□□□□ 0.01
HMG20A-211ENST00000560867 FBLN2P98095 1184 aa15.11■□□□□ 0.01
HMG20A-211ENST00000560867 ABCB7O75027 752 aa15.04■□□□□ -0
HMG20A-211ENST00000560867 FKBP8Q14318 412 aa14.99□□□□□ -0.01
HMG20A-211ENST00000560867 MKRN4PQ13434 485 aaPredicted RBP14.97□□□□□ -0.01
HMG20A-211ENST00000560867 SPDYE4A6NLX3 237 aa14.81□□□□□ -0.04
HMG20A-211ENST00000560867 SPDYE2BA6NHP3 402 aa14.71□□□□□ -0.05
HMG20A-211ENST00000560867 SPDYE6P0CI01 402 aa14.71□□□□□ -0.05
HMG20A-211ENST00000560867 SPDYE2Q495Y8 402 aa14.71□□□□□ -0.05
HMG20A-211ENST00000560867 PROM2Q8N271 834 aa14.7□□□□□ -0.06
HMG20A-211ENST00000560867 OSCARQ8IYS5 282 aa14.64□□□□□ -0.07
HMG20A-211ENST00000560867 FBXO3Q9UK99 471 aa14.59□□□□□ -0.07
HMG20A-211ENST00000560867 SSUH2Q9Y2M2 353 aa14.58□□□□□ -0.08
HMG20A-211ENST00000560867 ZNF692Q9BU19 519 aaPredicted RBP14.57□□□□□ -0.08
HMG20A-211ENST00000560867 RBM42Q9BTD8 480 aaKnown RBP14.54□□□□□ -0.08
HMG20A-211ENST00000560867 PABPN1Q86U42 306 aaKnown RBP eCLIP14.37□□□□□ -0.11
HMG20A-211ENST00000560867 AKT1S1Q96B36 256 aa14.36□□□□□ -0.11
HMG20A-211ENST00000560867 STAG3Q9UJ98 1225 aa14.35□□□□□ -0.11
HMG20A-211ENST00000560867 VASPP50552 380 aaPredicted RBP14.28□□□□□ -0.12
HMG20A-211ENST00000560867 AMER1Q5JTC6 1135 aaPredicted RBP14.24□□□□□ -0.13
HMG20A-211ENST00000560867 SPDYE1Q8NFV5 336 aaPredicted RBP14.2□□□□□ -0.14
HMG20A-211ENST00000560867 REM2Q8IYK8 340 aaPredicted RBP14.12□□□□□ -0.15
HMG20A-211ENST00000560867 PLEKHG5O94827 1062 aa14.06□□□□□ -0.16
HMG20A-211ENST00000560867 IFNLR1Q8IU57 520 aaPredicted RBP14.03□□□□□ -0.16
HMG20A-211ENST00000560867 PLCD3Q8N3E9 789 aa14.03□□□□□ -0.16
HMG20A-211ENST00000560867 ZBTB47Q9UFB7 747 aaPredicted RBP14.03□□□□□ -0.16
HMG20A-211ENST00000560867 RTN4Q9NQC3 1192 aaKnown RBP14.01□□□□□ -0.17
HMG20A-211ENST00000560867 MIER1Q8N108 512 aa13.99□□□□□ -0.17
HMG20A-211ENST00000560867 CLEC11AQ9Y240 323 aa13.97□□□□□ -0.17
HMG20A-211ENST00000560867 PITPNM1O00562 1244 aa13.95□□□□□ -0.18
HMG20A-211ENST00000560867 PRR29P0C7W0 189 aa13.95□□□□□ -0.18
HMG20A-211ENST00000560867 KLHL34Q8N239 644 aa13.92□□□□□ -0.18
HMG20A-211ENST00000560867 SPOCK2Q92563 424 aa13.91□□□□□ -0.18
HMG20A-211ENST00000560867 CREBZFQ9NS37 354 aa13.8□□□□□ -0.2
HMG20A-211ENST00000560867 MNX1P50219 401 aaPredicted RBP13.71□□□□□ -0.21
HMG20A-211ENST00000560867 CHRDL2Q6WN34 429 aa13.71□□□□□ -0.21
HMG20A-211ENST00000560867 NPM1P06748 294 aaKnown RBP eCLIP13.7□□□□□ -0.22
HMG20A-211ENST00000560867 FXR2P51116 673 aaKnown RBP eCLIP13.69□□□□□ -0.22
HMG20A-211ENST00000560867 TRIM41Q8WV44 630 aa13.69□□□□□ -0.22
HMG20A-211ENST00000560867 PKD2Q13563 968 aa13.66□□□□□ -0.22
HMG20A-211ENST00000560867 GSE1Q14687 1217 aa13.65□□□□□ -0.22
HMG20A-211ENST00000560867 NUBP1P53384 320 aa13.64□□□□□ -0.23
HMG20A-211ENST00000560867 PRKAR2AP13861 404 aaKnown RBP13.6□□□□□ -0.23
HMG20A-211ENST00000560867 FAM212AQ96EL1 285 aa13.59□□□□□ -0.23
HMG20A-211ENST00000560867 FARP1Q9Y4F1 1045 aaPredicted RBP13.58□□□□□ -0.24
HMG20A-211ENST00000560867 ECM2O94769 699 aaPredicted RBP13.56□□□□□ -0.24
HMG20A-211ENST00000560867 PIP4P2Q8N4L2 257 aa13.56□□□□□ -0.24
HMG20A-211ENST00000560867 CIZ1Q9ULV3 898 aaPredicted RBP13.56□□□□□ -0.24
HMG20A-211ENST00000560867 CHADLQ6NUI6 762 aa13.55□□□□□ -0.24
HMG20A-211ENST00000560867 DCAF8Q5TAQ9 597 aa13.48□□□□□ -0.25
HMG20A-211ENST00000560867 RASEFQ8IZ41 740 aa13.48□□□□□ -0.25
HMG20A-211ENST00000560867 CHRM1P11229 460 aaPredicted RBP13.45□□□□□ -0.26
HMG20A-211ENST00000560867 PAK3O75914 559 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms