RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 RPL24P83731 157 aaKnown RBP5.42□□□□□ -1.54
LRRC28-211ENST00000558890 RNF151Q2KHN1 245 aa5.42□□□□□ -1.54
LRRC28-211ENST00000558890 Q6ZTI0 123 aa5.42□□□□□ -1.54
LRRC28-211ENST00000558890 MUC4Q99102 2169 aa5.42□□□□□ -1.54
LRRC28-211ENST00000558890 ALMS1Q8TCU4 4167 aa5.41□□□□□ -1.54
LRRC28-211ENST00000558890 DNAH6Q9C0G6 4158 aa5.41□□□□□ -1.54
LRRC28-211ENST00000558890 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.41□□□□□ -1.54
LRRC28-211ENST00000558890 IGHV1-58A0A0C4DH39 117 aa5.41□□□□□ -1.54
LRRC28-211ENST00000558890 GAGE12JA6NER3 117 aa5.41□□□□□ -1.54
LRRC28-211ENST00000558890 FAM229AH3BQW9 127 aa5.41□□□□□ -1.54
LRRC28-211ENST00000558890 UBE2L6O14933 153 aa5.41□□□□□ -1.54
LRRC28-211ENST00000558890 APOMO95445 188 aa5.41□□□□□ -1.54
LRRC28-211ENST00000558890 IGHV3-30P01768 117 aa5.41□□□□□ -1.54
LRRC28-211ENST00000558890 IGHV3-30-5P0DP03 117 aa5.41□□□□□ -1.54
LRRC28-211ENST00000558890 GAGE4Q13068 117 aa5.41□□□□□ -1.54
LRRC28-211ENST00000558890 GAGE5Q13069 117 aa5.41□□□□□ -1.54
LRRC28-211ENST00000558890 GAGE13Q4V321 117 aa5.41□□□□□ -1.54
LRRC28-211ENST00000558890 CEMP1Q6PRD7 247 aaPredicted RBP5.41□□□□□ -1.54
LRRC28-211ENST00000558890 WWC2-AS2Q96NR7 200 aa5.41□□□□□ -1.54
LRRC28-211ENST00000558890 VPS25Q9BRG1 176 aa5.41□□□□□ -1.54
LRRC28-211ENST00000558890 NOP10Q9NPE3 64 aaKnown RBP5.41□□□□□ -1.54
LRRC28-211ENST00000558890 TRGV4A0A0C4DH28 118 aa5.4□□□□□ -1.54
LRRC28-211ENST00000558890 F8W1H4 67 aa5.4□□□□□ -1.54
LRRC28-211ENST00000558890 H3BNG1 76 aa5.4□□□□□ -1.54
LRRC28-211ENST00000558890 GAGE7O76087 117 aa5.4□□□□□ -1.54
LRRC28-211ENST00000558890 GAGE12FP0CL80 117 aa5.4□□□□□ -1.54
LRRC28-211ENST00000558890 GAGE12GP0CL81 117 aa5.4□□□□□ -1.54
LRRC28-211ENST00000558890 GAGE12IP0CL82 117 aa5.4□□□□□ -1.54
LRRC28-211ENST00000558890 IGHV3-30-3P0DP02 117 aa5.4□□□□□ -1.54
LRRC28-211ENST00000558890 TIRAPP58753 221 aa5.4□□□□□ -1.54
LRRC28-211ENST00000558890 UBE2D3P61077 147 aa5.4□□□□□ -1.54
LRRC28-211ENST00000558890 UBE2D2P62837 147 aa5.4□□□□□ -1.54
LRRC28-211ENST00000558890 HERVK_113P63121 156 aa5.4□□□□□ -1.54
LRRC28-211ENST00000558890 RNASE13Q5GAN3 156 aaKnown RBP5.4□□□□□ -1.54
LRRC28-211ENST00000558890 TMEM101Q96IK0 257 aa5.4□□□□□ -1.54
LRRC28-211ENST00000558890 TMEM243Q9BU79 118 aa5.4□□□□□ -1.54
LRRC28-211ENST00000558890 HYDINQ4G0P3 5121 aa5.4□□□□□ -1.55
LRRC28-211ENST00000558890 A0A0B4J2C4 111 aa5.39□□□□□ -1.55
LRRC28-211ENST00000558890 A0A0J9YXY3 114 aa5.39□□□□□ -1.55
LRRC28-211ENST00000558890 TRBV6-4A0A1B0GX49 114 aa5.39□□□□□ -1.55
LRRC28-211ENST00000558890 J3QR89 54 aa5.39□□□□□ -1.55
LRRC28-211ENST00000558890 EIF4EBP3O60516 100 aaPredicted RBP5.39□□□□□ -1.55
LRRC28-211ENST00000558890 TSPAN13O95857 204 aa5.39□□□□□ -1.55
LRRC28-211ENST00000558890 RBX1P62877 108 aa5.39□□□□□ -1.55
LRRC28-211ENST00000558890 FAM222AQ5U5X8 452 aa5.39□□□□□ -1.55
LRRC28-211ENST00000558890 C10orf126Q8N4M7 172 aa5.39□□□□□ -1.55
LRRC28-211ENST00000558890 VSIG2Q96IQ7 327 aa5.39□□□□□ -1.55
LRRC28-211ENST00000558890 NDUFA12Q9UI09 145 aa5.39□□□□□ -1.55
LRRC28-211ENST00000558890 CSDC2Q9Y534 153 aaKnown RBP5.39□□□□□ -1.55
LRRC28-211ENST00000558890 IGLV5-45A0A087WSX0 123 aa5.38□□□□□ -1.55
LRRC28-211ENST00000558890 TRAV8-3A0A0A6YYJ7 113 aa5.38□□□□□ -1.55
LRRC28-211ENST00000558890 LOC107984156A0A0G2JMH3 177 aa5.38□□□□□ -1.55
LRRC28-211ENST00000558890 A0A0J9YWU9 116 aa5.38□□□□□ -1.55
LRRC28-211ENST00000558890 H7C423 109 aa5.38□□□□□ -1.55
LRRC28-211ENST00000558890 ATP5G1P05496 136 aa5.38□□□□□ -1.55
LRRC28-211ENST00000558890 SPINK8P0C7L1 97 aa5.38□□□□□ -1.55
LRRC28-211ENST00000558890 ZFAND6Q6FIF0 208 aa5.38□□□□□ -1.55
LRRC28-211ENST00000558890 ARL17AQ8IVW1 177 aa5.38□□□□□ -1.55
LRRC28-211ENST00000558890 C11orf45Q8TAV5 145 aa5.38□□□□□ -1.55
LRRC28-211ENST00000558890 FAM104AQ969W3 186 aa5.38□□□□□ -1.55
LRRC28-211ENST00000558890 GTSF1LQ9H1H1 148 aa5.38□□□□□ -1.55
LRRC28-211ENST00000558890 Q9UF83 564 aa5.38□□□□□ -1.55
LRRC28-211ENST00000558890 PRO1854Q9UHT4 67 aa5.38□□□□□ -1.55
LRRC28-211ENST00000558890 TRBV20-1A0A075B6N2 111 aa5.37□□□□□ -1.55
LRRC28-211ENST00000558890 A4D1N5 150 aa5.37□□□□□ -1.55
LRRC28-211ENST00000558890 H3BMG7 143 aa5.37□□□□□ -1.55
LRRC28-211ENST00000558890 TIMM17BO60830 172 aa5.37□□□□□ -1.55
LRRC28-211ENST00000558890 DAD1P61803 113 aa5.37□□□□□ -1.55
LRRC28-211ENST00000558890 CIRBPQ14011 172 aaKnown RBP5.37□□□□□ -1.55
LRRC28-211ENST00000558890 Q1RN00 199 aa5.37□□□□□ -1.55
LRRC28-211ENST00000558890 MUSTN1Q8IVN3 82 aa5.37□□□□□ -1.55
LRRC28-211ENST00000558890 COPS9Q8WXC6 57 aa5.37□□□□□ -1.55
LRRC28-211ENST00000558890 SPANXDQ9BXN6 97 aa5.37□□□□□ -1.55
LRRC28-211ENST00000558890 SPANXCQ9NY87 97 aa5.37□□□□□ -1.55
LRRC28-211ENST00000558890 ERG28Q9UKR5 140 aa5.37□□□□□ -1.55
LRRC28-211ENST00000558890 TRAV10A0A0B4J240 114 aa5.36□□□□□ -1.55
LRRC28-211ENST00000558890 NDUFA1O15239 70 aa5.36□□□□□ -1.55
LRRC28-211ENST00000558890 CFC1BP0CG36 223 aa5.36□□□□□ -1.55
LRRC28-211ENST00000558890 CFC1P0CG37 223 aa5.36□□□□□ -1.55
LRRC28-211ENST00000558890 SCGB1C2P0DMR2 95 aa5.36□□□□□ -1.55
LRRC28-211ENST00000558890 IFITM1P13164 125 aa5.36□□□□□ -1.55
LRRC28-211ENST00000558890 PSMB2P49721 201 aa5.36□□□□□ -1.55
LRRC28-211ENST00000558890 MIAQ16674 131 aa5.36□□□□□ -1.55
LRRC28-211ENST00000558890 FAM19A3Q7Z5A8 133 aa5.36□□□□□ -1.55
LRRC28-211ENST00000558890 MUC7Q8TAX7 377 aa5.36□□□□□ -1.55
LRRC28-211ENST00000558890 CDKN2A-AS1Q9UH64 79 aa5.36□□□□□ -1.55
LRRC28-211ENST00000558890 NACAE9PAV3 2078 aa5.36□□□□□ -1.55
LRRC28-211ENST00000558890 DNAH10Q8IVF4 4471 aa5.36□□□□□ -1.55
LRRC28-211ENST00000558890 TRAV13-1A0A0B4J241 112 aa5.35□□□□□ -1.55
LRRC28-211ENST00000558890 NUPR2A6NF83 97 aa5.35□□□□□ -1.55
LRRC28-211ENST00000558890 C3orf84H3BNL1 204 aa5.35□□□□□ -1.55
LRRC28-211ENST00000558890 PRSS2P07478 247 aa5.35□□□□□ -1.55
LRRC28-211ENST00000558890 LINC00694P0DN24 101 aa5.35□□□□□ -1.55
LRRC28-211ENST00000558890 CASC10Q5T4H9 136 aa5.35□□□□□ -1.55
LRRC28-211ENST00000558890 LINC00242Q5T6M2 205 aa5.35□□□□□ -1.55
LRRC28-211ENST00000558890 NTM-AS1Q6ZSK4 140 aa5.35□□□□□ -1.55
LRRC28-211ENST00000558890 SH2D6Q7Z4S9 175 aa5.35□□□□□ -1.55
LRRC28-211ENST00000558890 PRO0255Q9UI72 69 aa5.35□□□□□ -1.55
LRRC28-211ENST00000558890 CELA1Q9UNI1 258 aa5.35□□□□□ -1.55
LRRC28-211ENST00000558890 TRAV26-1A0A087WT03 109 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms