RNA–Protein interactions for RNA: ENST00000557685.5

EFCAB11-213, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-213ENST00000557685 COMMD3Q9UBI1 195 aa0.85□□□□□ -2.27
EFCAB11-213ENST00000557685 HLA-DRB4X5D2U9 266 aa0.85□□□□□ -2.27
EFCAB11-213ENST00000557685 MACF1Q9UPN3 7388 aaKnown RBP0.85□□□□□ -2.27
EFCAB11-213ENST00000557685 KNTC1P50748 2209 aa0.85□□□□□ -2.27
EFCAB11-213ENST00000557685 HELZP42694 1942 aaKnown RBP0.85□□□□□ -2.27
EFCAB11-213ENST00000557685 DNAH7Q8WXX0 4024 aa0.85□□□□□ -2.27
EFCAB11-213ENST00000557685 SRRM2Q9UQ35 2752 aaKnown RBP0.85□□□□□ -2.27
EFCAB11-213ENST00000557685 MUC12Q9UKN1 5478 aa0.85□□□□□ -2.27
EFCAB11-213ENST00000557685 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.27
EFCAB11-213ENST00000557685 ANK1P16157 1881 aa0.84□□□□□ -2.27
EFCAB11-213ENST00000557685 NDUFA2O43678 99 aa0.84□□□□□ -2.27
EFCAB11-213ENST00000557685 CKS2P33552 79 aa0.84□□□□□ -2.27
EFCAB11-213ENST00000557685 PCBD1P61457 104 aa0.84□□□□□ -2.27
EFCAB11-213ENST00000557685 NEDD8Q15843 81 aa0.84□□□□□ -2.27
EFCAB11-213ENST00000557685 C6orf52Q5T4I8 152 aa0.84□□□□□ -2.27
EFCAB11-213ENST00000557685 CSAG1Q6PB30 78 aa0.84□□□□□ -2.27
EFCAB11-213ENST00000557685 LINC00299Q6ZSB3 139 aa0.84□□□□□ -2.27
EFCAB11-213ENST00000557685 OR10AC1Q8NH08 325 aa0.84□□□□□ -2.27
EFCAB11-213ENST00000557685 AP1S3Q96PC3 154 aa0.84□□□□□ -2.27
EFCAB11-213ENST00000557685 SMIM3Q9BZL3 60 aa0.84□□□□□ -2.27
EFCAB11-213ENST00000557685 METTL1Q9UBP6 276 aaKnown RBP0.84□□□□□ -2.27
EFCAB11-213ENST00000557685 U3KQA8 63 aa0.84□□□□□ -2.27
EFCAB11-213ENST00000557685 PKDREJQ9NTG1 2253 aa0.84□□□□□ -2.28
EFCAB11-213ENST00000557685 SPTBP11277 2137 aa0.83□□□□□ -2.28
EFCAB11-213ENST00000557685 VPS13DQ5THJ4 4388 aa0.83□□□□□ -2.28
EFCAB11-213ENST00000557685 IGHV1-24A0A0C4DH33 117 aa0.83□□□□□ -2.28
EFCAB11-213ENST00000557685 CDC42EP2O14613 210 aa0.83□□□□□ -2.28
EFCAB11-213ENST00000557685 EDF1O60869 148 aaKnown RBP0.83□□□□□ -2.28
EFCAB11-213ENST00000557685 HMGN1P05114 100 aa0.83□□□□□ -2.28
EFCAB11-213ENST00000557685 TSPAN19P0C672 248 aa0.83□□□□□ -2.28
EFCAB11-213ENST00000557685 EVI2AP22794 236 aa0.83□□□□□ -2.28
EFCAB11-213ENST00000557685 KDELR1P24390 212 aa0.83□□□□□ -2.28
EFCAB11-213ENST00000557685 ETV6P41212 452 aa0.83□□□□□ -2.28
EFCAB11-213ENST00000557685 TFF3Q07654 80 aa0.83□□□□□ -2.28
EFCAB11-213ENST00000557685 ASB16-AS1Q495Z4 193 aa0.83□□□□□ -2.28
EFCAB11-213ENST00000557685 C10orf111Q8N326 155 aa0.83□□□□□ -2.28
EFCAB11-213ENST00000557685 LSM2Q9Y333 95 aaKnown RBP0.83□□□□□ -2.28
EFCAB11-213ENST00000557685 KNL1Q8NG31 2342 aa0.83□□□□□ -2.28
EFCAB11-213ENST00000557685 LRP1BQ9NZR2 4599 aa0.83□□□□□ -2.28
EFCAB11-213ENST00000557685 DNAH5Q8TE73 4624 aa0.83□□□□□ -2.28
EFCAB11-213ENST00000557685 TRAV23DV6A0A075B6W5 121 aa0.82□□□□□ -2.28
EFCAB11-213ENST00000557685 FAM236AA0A1B0GUQ0 79 aa0.82□□□□□ -2.28
EFCAB11-213ENST00000557685 FAM236BA0A1B0GV22 79 aa0.82□□□□□ -2.28
EFCAB11-213ENST00000557685 SMIM24O75264 130 aa0.82□□□□□ -2.28
EFCAB11-213ENST00000557685 HIST1H1BP16401 226 aaKnown RBP0.82□□□□□ -2.28
EFCAB11-213ENST00000557685 PDE6GP18545 87 aa0.82□□□□□ -2.28
EFCAB11-213ENST00000557685 ASIPP42127 132 aa0.82□□□□□ -2.28
EFCAB11-213ENST00000557685 FXYD4P59646 89 aa0.82□□□□□ -2.28
EFCAB11-213ENST00000557685 DNAJB13P59910 316 aa0.82□□□□□ -2.28
EFCAB11-213ENST00000557685 KRTAP5-10Q6L8G5 202 aa0.82□□□□□ -2.28
EFCAB11-213ENST00000557685 Q6ZS92 163 aa0.82□□□□□ -2.28
EFCAB11-213ENST00000557685 TCTEX1D1Q8N7M0 179 aa0.82□□□□□ -2.28
EFCAB11-213ENST00000557685 LPAR5Q9H1C0 372 aa0.82□□□□□ -2.28
EFCAB11-213ENST00000557685 SLC35B3Q9H1N7 401 aa0.82□□□□□ -2.28
EFCAB11-213ENST00000557685 COPZ2Q9P299 210 aa0.82□□□□□ -2.28
EFCAB11-213ENST00000557685 DNAH2Q9P225 4427 aa0.82□□□□□ -2.28
EFCAB11-213ENST00000557685 AKAP6Q13023 2319 aa0.81□□□□□ -2.28
EFCAB11-213ENST00000557685 A0A1W2PPB8 328 aa0.81□□□□□ -2.28
EFCAB11-213ENST00000557685 A0A1W2PRS3 328 aa0.81□□□□□ -2.28
EFCAB11-213ENST00000557685 IFITM5A6NNB3 132 aa0.81□□□□□ -2.28
EFCAB11-213ENST00000557685 KIR3DP1A8MWS1 328 aa0.81□□□□□ -2.28
EFCAB11-213ENST00000557685 M0R2Z0 102 aa0.81□□□□□ -2.28
EFCAB11-213ENST00000557685 PITX3O75364 302 aa0.81□□□□□ -2.28
EFCAB11-213ENST00000557685 COX4I1P13073 169 aa0.81□□□□□ -2.28
EFCAB11-213ENST00000557685 LSM3P62310 102 aaKnown RBP0.81□□□□□ -2.28
EFCAB11-213ENST00000557685 CCSMST1Q4G0I0 132 aa0.81□□□□□ -2.28
EFCAB11-213ENST00000557685 OCIAD2Q56VL3 154 aa0.81□□□□□ -2.28
EFCAB11-213ENST00000557685 CLLU1Q5K131 121 aa0.81□□□□□ -2.28
EFCAB11-213ENST00000557685 FDCSPQ8NFU4 85 aa0.81□□□□□ -2.28
EFCAB11-213ENST00000557685 SMIM7Q9BQ49 75 aa0.81□□□□□ -2.28
EFCAB11-213ENST00000557685 ALMS1Q8TCU4 4167 aa0.81□□□□□ -2.28
EFCAB11-213ENST00000557685 MYH13Q9UKX3 1938 aa0.81□□□□□ -2.28
EFCAB11-213ENST00000557685 DNAH3Q8TD57 4116 aa0.81□□□□□ -2.28
EFCAB11-213ENST00000557685 ABCA1O95477 2261 aa0.8□□□□□ -2.28
EFCAB11-213ENST00000557685 MYH6P13533 1939 aa0.8□□□□□ -2.28
EFCAB11-213ENST00000557685 K7EIL1 84 aa0.8□□□□□ -2.28
EFCAB11-213ENST00000557685 M0R129 80 aa0.8□□□□□ -2.28
EFCAB11-213ENST00000557685 IGHV3-30P01768 117 aa0.8□□□□□ -2.28
EFCAB11-213ENST00000557685 IGKCP01834 107 aa0.8□□□□□ -2.28
EFCAB11-213ENST00000557685 APODP05090 189 aa0.8□□□□□ -2.28
EFCAB11-213ENST00000557685 IGHV3-30-5P0DP03 117 aa0.8□□□□□ -2.28
EFCAB11-213ENST00000557685 MAGOHBQ96A72 148 aaKnown RBP0.8□□□□□ -2.28
EFCAB11-213ENST00000557685 FAM107BQ9H098 131 aa0.8□□□□□ -2.28
EFCAB11-213ENST00000557685 USF3Q68DE3 2245 aa0.79□□□□□ -2.28
EFCAB11-213ENST00000557685 PKHD1L1Q86WI1 4243 aa0.79□□□□□ -2.28
EFCAB11-213ENST00000557685 BBIP1A8MTZ0 92 aa0.79□□□□□ -2.28
EFCAB11-213ENST00000557685 C10orf142B7Z368 130 aa0.79□□□□□ -2.28
EFCAB11-213ENST00000557685 IGF2P01344 180 aa0.79□□□□□ -2.28
EFCAB11-213ENST00000557685 STATHP02808 62 aa0.79□□□□□ -2.28
EFCAB11-213ENST00000557685 KRTAP2-3P0C7H8 128 aa0.79□□□□□ -2.28
EFCAB11-213ENST00000557685 ADCYAP1P18509 176 aa0.79□□□□□ -2.28
EFCAB11-213ENST00000557685 RPS25P62851 125 aaKnown RBP0.79□□□□□ -2.28
EFCAB11-213ENST00000557685 RHOHQ15669 191 aa0.79□□□□□ -2.28
EFCAB11-213ENST00000557685 DEFB121Q5J5C9 76 aa0.79□□□□□ -2.28
EFCAB11-213ENST00000557685 LYPD5Q6UWN5 251 aa0.79□□□□□ -2.28
EFCAB11-213ENST00000557685 CTAGE3PQ8IX95 158 aa0.79□□□□□ -2.28
EFCAB11-213ENST00000557685 KRTAP2-4Q9BYR9 128 aa0.79□□□□□ -2.28
EFCAB11-213ENST00000557685 TPT1P8Q9HAU6 139 aa0.79□□□□□ -2.28
EFCAB11-213ENST00000557685 CCDC171Q6TFL3 1326 aa0.79□□□□□ -2.28
EFCAB11-213ENST00000557685 LRP1Q07954 4544 aaKnown RBP0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms