RNA–Protein interactions for RNA: ENST00000556501.1

GPHN-213, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-213ENST00000556501 TRBV30A0A0K0K1B3 111 aa3.82□□□□□ -1.8
GPHN-213ENST00000556501 A8MZ25 164 aa3.82□□□□□ -1.8
GPHN-213ENST00000556501 SMIM1B2RUZ4 78 aa3.82□□□□□ -1.8
GPHN-213ENST00000556501 F5H768 121 aa3.82□□□□□ -1.8
GPHN-213ENST00000556501 GAGE7O76087 117 aa3.82□□□□□ -1.8
GPHN-213ENST00000556501 GAGE12FP0CL80 117 aa3.82□□□□□ -1.8
GPHN-213ENST00000556501 GAGE12GP0CL81 117 aa3.82□□□□□ -1.8
GPHN-213ENST00000556501 GAGE12IP0CL82 117 aa3.82□□□□□ -1.8
GPHN-213ENST00000556501 COX6A2Q02221 97 aa3.82□□□□□ -1.8
GPHN-213ENST00000556501 FOXI1Q12951 378 aa3.82□□□□□ -1.8
GPHN-213ENST00000556501 LINC01600Q96MT4 127 aa3.82□□□□□ -1.8
GPHN-213ENST00000556501 CDC42SE2Q9NRR3 84 aa3.82□□□□□ -1.8
GPHN-213ENST00000556501 OTOGQ6ZRI0 2925 aa3.82□□□□□ -1.8
GPHN-213ENST00000556501 VPS13CQ709C8 3753 aa3.81□□□□□ -1.8
GPHN-213ENST00000556501 SETD2Q9BYW2 2564 aaPredicted RBP3.81□□□□□ -1.8
GPHN-213ENST00000556501 NOTCH3Q9UM47 2321 aa3.81□□□□□ -1.8
GPHN-213ENST00000556501 GAGE12HA6NDE8 117 aa3.81□□□□□ -1.8
GPHN-213ENST00000556501 H7C2G1 150 aa3.81□□□□□ -1.8
GPHN-213ENST00000556501 UBE2L6O14933 153 aa3.81□□□□□ -1.8
GPHN-213ENST00000556501 TRIAP1O43715 76 aa3.81□□□□□ -1.8
GPHN-213ENST00000556501 PRSS2P07478 247 aa3.81□□□□□ -1.8
GPHN-213ENST00000556501 SCGB1C2P0DMR2 95 aa3.81□□□□□ -1.8
GPHN-213ENST00000556501 SCGB1A1P11684 91 aa3.81□□□□□ -1.8
GPHN-213ENST00000556501 INSL3P51460 131 aa3.81□□□□□ -1.8
GPHN-213ENST00000556501 KRTAP10-3P60369 221 aa3.81□□□□□ -1.8
GPHN-213ENST00000556501 FHL2Q14192 279 aa3.81□□□□□ -1.8
GPHN-213ENST00000556501 ATXN8Q156A1 80 aa3.81□□□□□ -1.8
GPHN-213ENST00000556501 Q1RN00 199 aa3.81□□□□□ -1.8
GPHN-213ENST00000556501 ANKRD29Q8N6D5 301 aa3.81□□□□□ -1.8
GPHN-213ENST00000556501 LINC00612Q8N6U2 182 aa3.81□□□□□ -1.8
GPHN-213ENST00000556501 LINC00482Q8N8I6 264 aa3.81□□□□□ -1.8
GPHN-213ENST00000556501 COPS9Q8WXC6 57 aa3.81□□□□□ -1.8
GPHN-213ENST00000556501 ZNF625Q96I27 306 aaPredicted RBP3.81□□□□□ -1.8
GPHN-213ENST00000556501 KRTAP4-8Q9BYQ9 185 aa3.81□□□□□ -1.8
GPHN-213ENST00000556501 PPDPFQ9H3Y8 114 aa3.81□□□□□ -1.8
GPHN-213ENST00000556501 Q9H8V8 135 aa3.81□□□□□ -1.8
GPHN-213ENST00000556501 PLA2G2DQ9UNK4 145 aa3.81□□□□□ -1.8
GPHN-213ENST00000556501 ICOSQ9Y6W8 199 aa3.81□□□□□ -1.8
GPHN-213ENST00000556501 ZFHX3Q15911 3703 aa3.81□□□□□ -1.8
GPHN-213ENST00000556501 TRAV13-1A0A0B4J241 112 aa3.8□□□□□ -1.8
GPHN-213ENST00000556501 TRGV4A0A0C4DH28 118 aa3.8□□□□□ -1.8
GPHN-213ENST00000556501 LOC100131303A0A0U1RQF7 123 aa3.8□□□□□ -1.8
GPHN-213ENST00000556501 C9JAW5 83 aa3.8□□□□□ -1.8
GPHN-213ENST00000556501 SLC25A20O43772 301 aa3.8□□□□□ -1.8
GPHN-213ENST00000556501 RPL13AP40429 203 aaKnown RBP3.8□□□□□ -1.8
GPHN-213ENST00000556501 HERV-K104P63124 156 aa3.8□□□□□ -1.8
GPHN-213ENST00000556501 CIRBPQ14011 172 aaKnown RBP3.8□□□□□ -1.8
GPHN-213ENST00000556501 LINC01620Q4KN68 170 aa3.8□□□□□ -1.8
GPHN-213ENST00000556501 KIR2DL5BQ8NHK3 375 aa3.8□□□□□ -1.8
GPHN-213ENST00000556501 LINC00308Q8TCZ7 52 aa3.8□□□□□ -1.8
GPHN-213ENST00000556501 CARD19Q96LW7 228 aa3.8□□□□□ -1.8
GPHN-213ENST00000556501 SIGMAR1Q99720 223 aa3.8□□□□□ -1.8
GPHN-213ENST00000556501 HIVEP1P15822 2718 aa3.8□□□□□ -1.8
GPHN-213ENST00000556501 NF1P21359 2839 aa3.8□□□□□ -1.8
GPHN-213ENST00000556501 TRBV6-8A0A0A6YYG3 113 aa3.79□□□□□ -1.8
GPHN-213ENST00000556501 LY6G6DO95868 133 aa3.79□□□□□ -1.8
GPHN-213ENST00000556501 NPC2P61916 151 aa3.79□□□□□ -1.8
GPHN-213ENST00000556501 PRIMA1Q86XR5 153 aa3.79□□□□□ -1.8
GPHN-213ENST00000556501 DAND5Q8N907 189 aa3.79□□□□□ -1.8
GPHN-213ENST00000556501 TEP1Q99973 2627 aaKnown RBP3.79□□□□□ -1.8
GPHN-213ENST00000556501 HIVEP2P31629 2446 aa3.79□□□□□ -1.8
GPHN-213ENST00000556501 F8P00451 2351 aa3.78□□□□□ -1.8
GPHN-213ENST00000556501 TRBV10-2A0A0K0K1G8 114 aa3.78□□□□□ -1.8
GPHN-213ENST00000556501 SMIM9A6NGZ8 99 aa3.78□□□□□ -1.8
GPHN-213ENST00000556501 H3BT86 120 aa3.78□□□□□ -1.8
GPHN-213ENST00000556501 LST1O00453 97 aa3.78□□□□□ -1.8
GPHN-213ENST00000556501 CRLF1O75462 422 aa3.78□□□□□ -1.8
GPHN-213ENST00000556501 COX6CP09669 75 aa3.78□□□□□ -1.8
GPHN-213ENST00000556501 GAGE6Q13070 117 aa3.78□□□□□ -1.8
GPHN-213ENST00000556501 SOSTDC1Q6X4U4 206 aa3.78□□□□□ -1.8
GPHN-213ENST00000556501 COX7B2Q8TF08 81 aa3.78□□□□□ -1.8
GPHN-213ENST00000556501 SMR3AQ99954 134 aa3.78□□□□□ -1.8
GPHN-213ENST00000556501 CHCHD5Q9BSY4 110 aa3.78□□□□□ -1.8
GPHN-213ENST00000556501 AKAP9Q99996 3911 aa3.77□□□□□ -1.81
GPHN-213ENST00000556501 IGLV4-60A0A075B6I1 120 aa3.77□□□□□ -1.81
GPHN-213ENST00000556501 LYRM9A8MSI8 78 aa3.77□□□□□ -1.81
GPHN-213ENST00000556501 MEIG1Q5JSS6 88 aa3.77□□□□□ -1.81
GPHN-213ENST00000556501 C9orf66Q5T8R8 295 aa3.77□□□□□ -1.81
GPHN-213ENST00000556501 FAM30AQ9NZY2 134 aa3.77□□□□□ -1.81
GPHN-213ENST00000556501 NIPBLQ6KC79 2804 aaeCLIP3.76□□□□□ -1.81
GPHN-213ENST00000556501 C2CD3Q4AC94 2353 aa3.76□□□□□ -1.81
GPHN-213ENST00000556501 A0A087WZ39 114 aa3.76□□□□□ -1.81
GPHN-213ENST00000556501 IGHV3OR16-9A0A0B4J2B5 98 aa3.76□□□□□ -1.81
GPHN-213ENST00000556501 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.76□□□□□ -1.81
GPHN-213ENST00000556501 TMEM262E9PQX1 116 aa3.76□□□□□ -1.81
GPHN-213ENST00000556501 COX7A2LO14548 114 aa3.76□□□□□ -1.81
GPHN-213ENST00000556501 DEFB130BP0DP73 79 aa3.76□□□□□ -1.81
GPHN-213ENST00000556501 DEFB130AP0DP74 79 aa3.76□□□□□ -1.81
GPHN-213ENST00000556501 FAM222AQ5U5X8 452 aa3.76□□□□□ -1.81
GPHN-213ENST00000556501 C2orf82Q6UX34 121 aa3.76□□□□□ -1.81
GPHN-213ENST00000556501 NTN5Q8WTR8 489 aaPredicted RBP3.76□□□□□ -1.81
GPHN-213ENST00000556501 CLEC2BQ92478 149 aa3.76□□□□□ -1.81
GPHN-213ENST00000556501 UBE2WQ96B02 151 aa3.76□□□□□ -1.81
GPHN-213ENST00000556501 A0A0U1RRA0 63 aa3.75□□□□□ -1.81
GPHN-213ENST00000556501 LINC00959A0A1B0GUT2 108 aa3.75□□□□□ -1.81
GPHN-213ENST00000556501 A0A1B0GUV1 79 aa3.75□□□□□ -1.81
GPHN-213ENST00000556501 IBA57-AS1B1ANH7 110 aa3.75□□□□□ -1.81
GPHN-213ENST00000556501 XGP55808 180 aa3.75□□□□□ -1.81
GPHN-213ENST00000556501 LINC01561Q8N1V8 128 aa3.75□□□□□ -1.81
GPHN-213ENST00000556501 KRTAP9-2Q9BYQ4 174 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms