RNA–Protein interactions for RNA: ENST00000555801.1

LINC00640-202, long intergenic non-protein coding RNA 640, humanhuman

TSL 3

Gene LINC00640, Length 392 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-202ENST00000555801 FOXA3P55318 350 aaPredicted RBP2.89□□□□□ -1.95
LINC00640-202ENST00000555801 GAGE13Q4V321 117 aa2.89□□□□□ -1.95
LINC00640-202ENST00000555801 MPV17L2Q567V2 206 aa2.89□□□□□ -1.95
LINC00640-202ENST00000555801 IBA57Q5T440 356 aaKnown RBP2.89□□□□□ -1.95
LINC00640-202ENST00000555801 LYPD5Q6UWN5 251 aa2.89□□□□□ -1.95
LINC00640-202ENST00000555801 FAM159AQ6UWV7 190 aa2.89□□□□□ -1.95
LINC00640-202ENST00000555801 SMIM20Q8N5G0 67 aa2.89□□□□□ -1.95
LINC00640-202ENST00000555801 CHCHD1Q96BP2 118 aaKnown RBP2.89□□□□□ -1.95
LINC00640-202ENST00000555801 VSIG2Q96IQ7 327 aa2.89□□□□□ -1.95
LINC00640-202ENST00000555801 MLST8Q9BVC4 326 aa2.89□□□□□ -1.95
LINC00640-202ENST00000555801 TM2D2Q9BX73 214 aa2.89□□□□□ -1.95
LINC00640-202ENST00000555801 JPT2Q9H910 190 aa2.89□□□□□ -1.95
LINC00640-202ENST00000555801 FAM30AQ9NZY2 134 aa2.89□□□□□ -1.95
LINC00640-202ENST00000555801 CSDC2Q9Y534 153 aaKnown RBP2.89□□□□□ -1.95
LINC00640-202ENST00000555801 SPCS1Q9Y6A9 102 aa2.89□□□□□ -1.95
LINC00640-202ENST00000555801 DNAH8Q96JB1 4490 aa2.89□□□□□ -1.95
LINC00640-202ENST00000555801 SYNE2Q8WXH0 6885 aaKnown RBP2.88□□□□□ -1.95
LINC00640-202ENST00000555801 A0A087WWL8 130 aa2.88□□□□□ -1.95
LINC00640-202ENST00000555801 TRGV4A0A0C4DH28 118 aa2.88□□□□□ -1.95
LINC00640-202ENST00000555801 IGHV3-16A0A0C4DH30 117 aa2.88□□□□□ -1.95
LINC00640-202ENST00000555801 TRBV6-1A0A0K0K1D8 114 aa2.88□□□□□ -1.95
LINC00640-202ENST00000555801 C19orf71A6NCJ1 209 aa2.88□□□□□ -1.95
LINC00640-202ENST00000555801 FAM231BA6NCW3 169 aa2.88□□□□□ -1.95
LINC00640-202ENST00000555801 J3KT08 172 aa2.88□□□□□ -1.95
LINC00640-202ENST00000555801 HSBP1O75506 76 aa2.88□□□□□ -1.95
LINC00640-202ENST00000555801 APCSP02743 223 aa2.88□□□□□ -1.95
LINC00640-202ENST00000555801 SPINK8P0C7L1 97 aa2.88□□□□□ -1.95
LINC00640-202ENST00000555801 ARMS2P0C7Q2 107 aa2.88□□□□□ -1.95
LINC00640-202ENST00000555801 COX8AP10176 69 aa2.88□□□□□ -1.95
LINC00640-202ENST00000555801 S100A4P26447 101 aaKnown RBP2.88□□□□□ -1.95
LINC00640-202ENST00000555801 FOXI1Q12951 378 aa2.88□□□□□ -1.95
LINC00640-202ENST00000555801 TAL2Q16559 108 aa2.88□□□□□ -1.95
LINC00640-202ENST00000555801 LYRM7Q5U5X0 104 aa2.88□□□□□ -1.95
LINC00640-202ENST00000555801 Q6AWC8 147 aa2.88□□□□□ -1.95
LINC00640-202ENST00000555801 RNASEKQ6P5S7 137 aaKnown RBP2.88□□□□□ -1.95
LINC00640-202ENST00000555801 LYZL1Q6UWQ5 148 aa2.88□□□□□ -1.95
LINC00640-202ENST00000555801 Q6ZTI0 123 aa2.88□□□□□ -1.95
LINC00640-202ENST00000555801 SH2D6Q7Z4S9 175 aa2.88□□□□□ -1.95
LINC00640-202ENST00000555801 TSKUQ8WUA8 353 aa2.88□□□□□ -1.95
LINC00640-202ENST00000555801 GTSF1Q8WW33 167 aa2.88□□□□□ -1.95
LINC00640-202ENST00000555801 IMUPQ9GZP8 106 aa2.88□□□□□ -1.95
LINC00640-202ENST00000555801 RPP21Q9H633 154 aaKnown RBP2.88□□□□□ -1.95
LINC00640-202ENST00000555801 HIGD1BQ9P298 99 aa2.88□□□□□ -1.95
LINC00640-202ENST00000555801 SS18L2Q9UHA2 77 aa2.88□□□□□ -1.95
LINC00640-202ENST00000555801 HHLA3Q9XRX5 114 aa2.88□□□□□ -1.95
LINC00640-202ENST00000555801 IGHV3-38A0A0C4DH36 116 aa2.87□□□□□ -1.95
LINC00640-202ENST00000555801 LRCOL1A6NCL2 159 aa2.87□□□□□ -1.95
LINC00640-202ENST00000555801 SYS1-DBNDD2H3BUS1 97 aa2.87□□□□□ -1.95
LINC00640-202ENST00000555801 NCR2O95944 276 aa2.87□□□□□ -1.95
LINC00640-202ENST00000555801 MGPP08493 103 aa2.87□□□□□ -1.95
LINC00640-202ENST00000555801 RNASE3P12724 160 aaKnown RBP2.87□□□□□ -1.95
LINC00640-202ENST00000555801 NTF3P20783 257 aa2.87□□□□□ -1.95
LINC00640-202ENST00000555801 CAMPP49913 170 aa2.87□□□□□ -1.95
LINC00640-202ENST00000555801 HBBP68871 147 aa2.87□□□□□ -1.95
LINC00640-202ENST00000555801 ZNF415Q09FC8 603 aa2.87□□□□□ -1.95
LINC00640-202ENST00000555801 TWIST1Q15672 202 aa2.87□□□□□ -1.95
LINC00640-202ENST00000555801 KIAA1644Q3SXP7 199 aa2.87□□□□□ -1.95
LINC00640-202ENST00000555801 FAM74A4Q5TZK3 123 aa2.87□□□□□ -1.95
LINC00640-202ENST00000555801 Q6ZSA8 131 aa2.87□□□□□ -1.95
LINC00640-202ENST00000555801 Q6ZUT4 128 aa2.87□□□□□ -1.95
LINC00640-202ENST00000555801 SCXQ7RTU7 201 aa2.87□□□□□ -1.95
LINC00640-202ENST00000555801 WFDC10BQ8IUB3 73 aa2.87□□□□□ -1.95
LINC00640-202ENST00000555801 C11orf72Q8NBR9 251 aa2.87□□□□□ -1.95
LINC00640-202ENST00000555801 LINC01600Q96MT4 127 aa2.87□□□□□ -1.95
LINC00640-202ENST00000555801 ODF3Q96PU9 254 aa2.87□□□□□ -1.95
LINC00640-202ENST00000555801 Q9HAA7 133 aa2.87□□□□□ -1.95
LINC00640-202ENST00000555801 TRGV11A0A075B6L2 103 aa2.86□□□□□ -1.95
LINC00640-202ENST00000555801 IGHV1-24A0A0C4DH33 117 aa2.86□□□□□ -1.95
LINC00640-202ENST00000555801 HIGD1CA8MV81 97 aa2.86□□□□□ -1.95
LINC00640-202ENST00000555801 IBA57-AS1B1ANH7 110 aa2.86□□□□□ -1.95
LINC00640-202ENST00000555801 B5MCH6 92 aa2.86□□□□□ -1.95
LINC00640-202ENST00000555801 K7EQD1 137 aa2.86□□□□□ -1.95
LINC00640-202ENST00000555801 SMIM13P0DJ93 91 aa2.86□□□□□ -1.95
LINC00640-202ENST00000555801 IFITM1P13164 125 aa2.86□□□□□ -1.95
LINC00640-202ENST00000555801 RPL37AP61513 92 aaKnown RBP2.86□□□□□ -1.95
LINC00640-202ENST00000555801 LINC01556Q5JQF7 62 aa2.86□□□□□ -1.95
LINC00640-202ENST00000555801 SPANXN1Q5VSR9 72 aa2.86□□□□□ -1.95
LINC00640-202ENST00000555801 ATOH7Q8N100 152 aa2.86□□□□□ -1.95
LINC00640-202ENST00000555801 FAM19A2Q8N3H0 131 aa2.86□□□□□ -1.95
LINC00640-202ENST00000555801 C14orf178Q8N769 122 aaPredicted RBP2.86□□□□□ -1.95
LINC00640-202ENST00000555801 GATD1Q8NB37 220 aa2.86□□□□□ -1.95
LINC00640-202ENST00000555801 NUP35Q8NFH5 326 aa2.86□□□□□ -1.95
LINC00640-202ENST00000555801 RAB37Q96AX2 223 aa2.86□□□□□ -1.95
LINC00640-202ENST00000555801 URB1-AS1Q96HZ7 61 aa2.86□□□□□ -1.95
LINC00640-202ENST00000555801 CHAC1Q9BUX1 264 aa2.86□□□□□ -1.95
LINC00640-202ENST00000555801 MAP1LC3CQ9BXW4 147 aa2.86□□□□□ -1.95
LINC00640-202ENST00000555801 GFRA4Q9GZZ7 299 aa2.86□□□□□ -1.95
LINC00640-202ENST00000555801 DPH3P1Q9H4G8 78 aa2.86□□□□□ -1.95
LINC00640-202ENST00000555801 PHLDA3Q9Y5J5 127 aa2.86□□□□□ -1.95
LINC00640-202ENST00000555801 LENEPQ9Y5L5 61 aa2.86□□□□□ -1.95
LINC00640-202ENST00000555801 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.85□□□□□ -1.95
LINC00640-202ENST00000555801 TRAV8-3A0A0A6YYJ7 113 aa2.85□□□□□ -1.95
LINC00640-202ENST00000555801 TRAV26-2A0A0B4J265 109 aa2.85□□□□□ -1.95
LINC00640-202ENST00000555801 LOC100131303A0A0U1RQF7 123 aa2.85□□□□□ -1.95
LINC00640-202ENST00000555801 A8MWL6 223 aa2.85□□□□□ -1.95
LINC00640-202ENST00000555801 E9PLD3 99 aa2.85□□□□□ -1.95
LINC00640-202ENST00000555801 F5H697 171 aa2.85□□□□□ -1.95
LINC00640-202ENST00000555801 SMKR1H3BMG3 65 aa2.85□□□□□ -1.95
LINC00640-202ENST00000555801 GATA1P15976 413 aaPredicted RBP2.85□□□□□ -1.95
LINC00640-202ENST00000555801 NDUFV3P56181 108 aaKnown RBP2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms