RNA–Protein interactions for RNA: ENST00000554943.5

PPP4R3A-206, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5 BASIC

Gene PPP4R3A, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-206ENST00000554943 LINC00308Q8TCZ7 52 aa8.83□□□□□ -1
PPP4R3A-206ENST00000554943 C22orf24Q9Y442 160 aa8.83□□□□□ -1
PPP4R3A-206ENST00000554943 ICOSQ9Y6W8 199 aa8.83□□□□□ -1
PPP4R3A-206ENST00000554943 HELZ2Q9BYK8 2649 aaKnown RBP8.83□□□□□ -1
PPP4R3A-206ENST00000554943 TRGV1A0A0A0MS02 117 aa8.83□□□□□ -1
PPP4R3A-206ENST00000554943 RPL36AP83881 106 aaKnown RBP8.83□□□□□ -1
PPP4R3A-206ENST00000554943 RPL36ALQ969Q0 106 aaKnown RBP8.83□□□□□ -1
PPP4R3A-206ENST00000554943 YAE1D1Q9NRH1 226 aa8.83□□□□□ -1
PPP4R3A-206ENST00000554943 FLNAP21333 2647 aaKnown RBP8.83□□□□□ -1
PPP4R3A-206ENST00000554943 DNAH1Q9P2D7 4330 aa8.83□□□□□ -1
PPP4R3A-206ENST00000554943 LST1O00453 97 aa8.82□□□□□ -1
PPP4R3A-206ENST00000554943 WFDC10AQ9H1F0 79 aa8.82□□□□□ -1
PPP4R3A-206ENST00000554943 TRBV10-2A0A0K0K1G8 114 aa8.82□□□□□ -1
PPP4R3A-206ENST00000554943 MT-ATP8P03928 68 aa8.82□□□□□ -1
PPP4R3A-206ENST00000554943 LINC01620Q4KN68 170 aa8.82□□□□□ -1
PPP4R3A-206ENST00000554943 C9JAW5 83 aa8.81□□□□□ -1
PPP4R3A-206ENST00000554943 J3QR89 54 aa8.81□□□□□ -1
PPP4R3A-206ENST00000554943 HIST2H2BCQ6DN03 193 aa8.81□□□□□ -1
PPP4R3A-206ENST00000554943 NOP10Q9NPE3 64 aaKnown RBP8.81□□□□□ -1
PPP4R3A-206ENST00000554943 X6R8D5 127 aa8.81□□□□□ -1
PPP4R3A-206ENST00000554943 SLC25A20O43772 301 aa8.81□□□□□ -1
PPP4R3A-206ENST00000554943 ATXN8Q156A1 80 aa8.81□□□□□ -1
PPP4R3A-206ENST00000554943 TRAV26-1A0A087WT03 109 aa8.81□□□□□ -1
PPP4R3A-206ENST00000554943 SDIM1Q6ZPB5 146 aa8.81□□□□□ -1
PPP4R3A-206ENST00000554943 CITED1Q99966 193 aa8.81□□□□□ -1
PPP4R3A-206ENST00000554943 IGHV3OR16-9A0A0B4J2B5 98 aa8.8□□□□□ -1
PPP4R3A-206ENST00000554943 HERV-K104P63124 156 aa8.8□□□□□ -1
PPP4R3A-206ENST00000554943 CKS1BP61024 79 aa8.79□□□□□ -1
PPP4R3A-206ENST00000554943 LINC01561Q8N1V8 128 aa8.79□□□□□ -1
PPP4R3A-206ENST00000554943 OTOGQ6ZRI0 2925 aa8.79□□□□□ -1
PPP4R3A-206ENST00000554943 LOC100131303A0A0U1RQF7 123 aa8.79□□□□□ -1
PPP4R3A-206ENST00000554943 WIPF1O43516 503 aa8.79□□□□□ -1
PPP4R3A-206ENST00000554943 CFAP161Q6P656 301 aa8.79□□□□□ -1
PPP4R3A-206ENST00000554943 TRBV6-8A0A0A6YYG3 113 aa8.78□□□□□ -1
PPP4R3A-206ENST00000554943 H3BT86 120 aa8.78□□□□□ -1
PPP4R3A-206ENST00000554943 XGP55808 180 aa8.78□□□□□ -1
PPP4R3A-206ENST00000554943 GEMIN7Q9H840 131 aaKnown RBP8.78□□□□□ -1
PPP4R3A-206ENST00000554943 A0A1B0GUV1 79 aa8.77□□□□□ -1.01
PPP4R3A-206ENST00000554943 TMEM243Q9BU79 118 aa8.77□□□□□ -1.01
PPP4R3A-206ENST00000554943 Q9H8V8 135 aa8.77□□□□□ -1.01
PPP4R3A-206ENST00000554943 A0A087WZ39 114 aa8.76□□□□□ -1.01
PPP4R3A-206ENST00000554943 IGLV4-60A0A075B6I1 120 aa8.76□□□□□ -1.01
PPP4R3A-206ENST00000554943 FAM222AQ5U5X8 452 aa8.76□□□□□ -1.01
PPP4R3A-206ENST00000554943 IGKV2-28A0A075B6P5 120 aa8.75□□□□□ -1.01
PPP4R3A-206ENST00000554943 GAGE12JA6NER3 117 aa8.75□□□□□ -1.01
PPP4R3A-206ENST00000554943 SMIM9A6NGZ8 99 aa8.75□□□□□ -1.01
PPP4R3A-206ENST00000554943 IGKV2D-28P01615 120 aa8.75□□□□□ -1.01
PPP4R3A-206ENST00000554943 GAGE4Q13068 117 aa8.75□□□□□ -1.01
PPP4R3A-206ENST00000554943 GAGE5Q13069 117 aa8.75□□□□□ -1.01
PPP4R3A-206ENST00000554943 SPATA3Q8NHX4 192 aa8.75□□□□□ -1.01
PPP4R3A-206ENST00000554943 C11orf68Q9H3H3 251 aaKnown RBP8.75□□□□□ -1.01
PPP4R3A-206ENST00000554943 ITPR2Q14571 2701 aa8.75□□□□□ -1.01
PPP4R3A-206ENST00000554943 FAM240AA0A1B0GVK7 77 aa8.75□□□□□ -1.01
PPP4R3A-206ENST00000554943 CLEC2BQ92478 149 aa8.74□□□□□ -1.01
PPP4R3A-206ENST00000554943 LY6G6DO95868 133 aa8.73□□□□□ -1.01
PPP4R3A-206ENST00000554943 NTN5Q8WTR8 489 aaPredicted RBP8.73□□□□□ -1.01
PPP4R3A-206ENST00000554943 TRRAPQ9Y4A5 3859 aa8.73□□□□□ -1.01
PPP4R3A-206ENST00000554943 COX7A2LO14548 114 aa8.73□□□□□ -1.01
PPP4R3A-206ENST00000554943 PF4P02776 101 aa8.73□□□□□ -1.01
PPP4R3A-206ENST00000554943 TRAV13-1A0A0B4J241 112 aa8.72□□□□□ -1.01
PPP4R3A-206ENST00000554943 GAGE7O76087 117 aa8.72□□□□□ -1.01
PPP4R3A-206ENST00000554943 GAGE12FP0CL80 117 aa8.72□□□□□ -1.01
PPP4R3A-206ENST00000554943 GAGE12GP0CL81 117 aa8.72□□□□□ -1.01
PPP4R3A-206ENST00000554943 GAGE12IP0CL82 117 aa8.72□□□□□ -1.01
PPP4R3A-206ENST00000554943 RPL28P46779 137 aaKnown RBP8.72□□□□□ -1.01
PPP4R3A-206ENST00000554943 DGAT2L7PQ6IED9 249 aa8.72□□□□□ -1.01
PPP4R3A-206ENST00000554943 J3QKU1 62 aa8.72□□□□□ -1.01
PPP4R3A-206ENST00000554943 COPS9Q8WXC6 57 aa8.72□□□□□ -1.01
PPP4R3A-206ENST00000554943 SS18L2Q9UHA2 77 aa8.72□□□□□ -1.01
PPP4R3A-206ENST00000554943 TEX49A0A1B0GTD5 131 aa8.71□□□□□ -1.01
PPP4R3A-206ENST00000554943 OBSCN-AS1Q96MR7 158 aa8.71□□□□□ -1.01
PPP4R3A-206ENST00000554943 TEP1Q99973 2627 aaKnown RBP8.71□□□□□ -1.02
PPP4R3A-206ENST00000554943 Q6Q795 121 aa8.71□□□□□ -1.02
PPP4R3A-206ENST00000554943 COX7B2Q8TF08 81 aa8.71□□□□□ -1.02
PPP4R3A-206ENST00000554943 VWFP04275 2813 aa8.71□□□□□ -1.02
PPP4R3A-206ENST00000554943 TRACP01848 142 aa8.7□□□□□ -1.02
PPP4R3A-206ENST00000554943 TTC32Q5I0X7 151 aa8.7□□□□□ -1.02
PPP4R3A-206ENST00000554943 TOMM7Q9P0U1 55 aa8.7□□□□□ -1.02
PPP4R3A-206ENST00000554943 TMEM262E9PQX1 116 aa8.7□□□□□ -1.02
PPP4R3A-206ENST00000554943 CIRBPQ14011 172 aaKnown RBP8.7□□□□□ -1.02
PPP4R3A-206ENST00000554943 MRPL23Q16540 153 aaKnown RBP8.7□□□□□ -1.02
PPP4R3A-206ENST00000554943 LINC00959A0A1B0GUT2 108 aa8.7□□□□□ -1.02
PPP4R3A-206ENST00000554943 RPL35AP18077 110 aaKnown RBP8.7□□□□□ -1.02
PPP4R3A-206ENST00000554943 IBA57-AS1B1ANH7 110 aa8.69□□□□□ -1.02
PPP4R3A-206ENST00000554943 FAM218AQ96MZ4 157 aa8.69□□□□□ -1.02
PPP4R3A-206ENST00000554943 KIAA0087Q14695 138 aa8.69□□□□□ -1.02
PPP4R3A-206ENST00000554943 LINC00337Q8N6G1 96 aa8.69□□□□□ -1.02
PPP4R3A-206ENST00000554943 C2orf82Q6UX34 121 aa8.68□□□□□ -1.02
PPP4R3A-206ENST00000554943 SMR3AQ99954 134 aa8.68□□□□□ -1.02
PPP4R3A-206ENST00000554943 UNC79Q9P2D8 2635 aa8.68□□□□□ -1.02
PPP4R3A-206ENST00000554943 IGHV4-28A0A0C4DH34 117 aa8.68□□□□□ -1.02
PPP4R3A-206ENST00000554943 LYRM9A8MSI8 78 aa8.68□□□□□ -1.02
PPP4R3A-206ENST00000554943 LINC00167Q96N53 147 aa8.68□□□□□ -1.02
PPP4R3A-206ENST00000554943 TRGV2A0A075B6R0 118 aa8.67□□□□□ -1.02
PPP4R3A-206ENST00000554943 B5MCH6 92 aa8.67□□□□□ -1.02
PPP4R3A-206ENST00000554943 CRLF1O75462 422 aa8.66□□□□□ -1.02
PPP4R3A-206ENST00000554943 Q8IZM0 81 aa8.66□□□□□ -1.02
PPP4R3A-206ENST00000554943 Q8NAQ8 132 aa8.66□□□□□ -1.02
PPP4R3A-206ENST00000554943 UBE2WQ96B02 151 aa8.66□□□□□ -1.02
PPP4R3A-206ENST00000554943 ANAPC13Q9BS18 74 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms