RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 TRGV4A0A0C4DH28 118 aa11.15□□□□□ -0.62
ARHGEF40-203ENST00000554514 TEX49A0A1B0GTD5 131 aa11.15□□□□□ -0.62
ARHGEF40-203ENST00000554514 TEX29Q8N6K0 151 aa11.15□□□□□ -0.62
ARHGEF40-203ENST00000554514 TRBV10-1A0A0K0K1A3 114 aa11.15□□□□□ -0.63
ARHGEF40-203ENST00000554514 GAGE6Q13070 117 aa11.15□□□□□ -0.63
ARHGEF40-203ENST00000554514 PDZD2O15018 2839 aa11.14□□□□□ -0.63
ARHGEF40-203ENST00000554514 COX6CP09669 75 aa11.14□□□□□ -0.63
ARHGEF40-203ENST00000554514 CDC42SE2Q9NRR3 84 aa11.14□□□□□ -0.63
ARHGEF40-203ENST00000554514 KRTAP1-1Q07627 177 aa11.14□□□□□ -0.63
ARHGEF40-203ENST00000554514 TMEM243Q9BU79 118 aa11.14□□□□□ -0.63
ARHGEF40-203ENST00000554514 ANK3Q12955 4377 aaKnown RBP11.13□□□□□ -0.63
ARHGEF40-203ENST00000554514 PLAC8L1A1L4L8 177 aa11.13□□□□□ -0.63
ARHGEF40-203ENST00000554514 LINC00308Q8TCZ7 52 aa11.13□□□□□ -0.63
ARHGEF40-203ENST00000554514 C2orf82Q6UX34 121 aa11.13□□□□□ -0.63
ARHGEF40-203ENST00000554514 C16orf74Q96GX8 76 aa11.13□□□□□ -0.63
ARHGEF40-203ENST00000554514 SMR3AQ99954 134 aa11.12□□□□□ -0.63
ARHGEF40-203ENST00000554514 TOMM7Q9P0U1 55 aa11.12□□□□□ -0.63
ARHGEF40-203ENST00000554514 NBEAL2Q6ZNJ1 2754 aa11.12□□□□□ -0.63
ARHGEF40-203ENST00000554514 IGLV5-39A0A0G2JS06 123 aa11.12□□□□□ -0.63
ARHGEF40-203ENST00000554514 GCN1Q92616 2671 aaKnown RBP11.12□□□□□ -0.63
ARHGEF40-203ENST00000554514 TRBV10-2A0A0K0K1G8 114 aa11.11□□□□□ -0.63
ARHGEF40-203ENST00000554514 IGLV1-51P01701 117 aa11.11□□□□□ -0.63
ARHGEF40-203ENST00000554514 DEFB130BP0DP73 79 aa11.11□□□□□ -0.63
ARHGEF40-203ENST00000554514 DEFB130AP0DP74 79 aa11.11□□□□□ -0.63
ARHGEF40-203ENST00000554514 TIMM17BO60830 172 aa11.11□□□□□ -0.63
ARHGEF40-203ENST00000554514 RNASE1P07998 156 aaKnown RBP11.11□□□□□ -0.63
ARHGEF40-203ENST00000554514 IFITM1P13164 125 aa11.11□□□□□ -0.63
ARHGEF40-203ENST00000554514 SOSTDC1Q6X4U4 206 aa11.11□□□□□ -0.63
ARHGEF40-203ENST00000554514 FASNP49327 2511 aaKnown RBP11.11□□□□□ -0.63
ARHGEF40-203ENST00000554514 HELZ2Q9BYK8 2649 aaKnown RBP11.1□□□□□ -0.63
ARHGEF40-203ENST00000554514 H7C423 109 aa11.1□□□□□ -0.63
ARHGEF40-203ENST00000554514 C19orf73Q9NVV2 129 aa11.1□□□□□ -0.63
ARHGEF40-203ENST00000554514 M0QXV9 152 aa11.1□□□□□ -0.63
ARHGEF40-203ENST00000554514 NOTCH2Q04721 2471 aa11.1□□□□□ -0.63
ARHGEF40-203ENST00000554514 HIVEP2P31629 2446 aa11.1□□□□□ -0.63
ARHGEF40-203ENST00000554514 CHCHD5Q9BSY4 110 aa11.09□□□□□ -0.63
ARHGEF40-203ENST00000554514 F5H768 121 aa11.08□□□□□ -0.63
ARHGEF40-203ENST00000554514 CSDC2Q9Y534 153 aaKnown RBP11.08□□□□□ -0.63
ARHGEF40-203ENST00000554514 UBE2WQ96B02 151 aa11.08□□□□□ -0.64
ARHGEF40-203ENST00000554514 IGLV4-60A0A075B6I1 120 aa11.08□□□□□ -0.64
ARHGEF40-203ENST00000554514 CSNK1G2-AS1Q8NCQ2 148 aa11.08□□□□□ -0.64
ARHGEF40-203ENST00000554514 CRLF1O75462 422 aa11.07□□□□□ -0.64
ARHGEF40-203ENST00000554514 C16orf95Q9H693 158 aa11.07□□□□□ -0.64
ARHGEF40-203ENST00000554514 CMC4P56277 68 aaPredicted RBP11.06□□□□□ -0.64
ARHGEF40-203ENST00000554514 LST1O00453 97 aa11.06□□□□□ -0.64
ARHGEF40-203ENST00000554514 UNC79Q9P2D8 2635 aa11.06□□□□□ -0.64
ARHGEF40-203ENST00000554514 TRBV6-4A0A1B0GX49 114 aa11.05□□□□□ -0.64
ARHGEF40-203ENST00000554514 TMEM262E9PQX1 116 aa11.05□□□□□ -0.64
ARHGEF40-203ENST00000554514 PF4P02776 101 aa11.05□□□□□ -0.64
ARHGEF40-203ENST00000554514 ANAPC13Q9BS18 74 aa11.05□□□□□ -0.64
ARHGEF40-203ENST00000554514 C11orf68Q9H3H3 251 aaKnown RBP11.05□□□□□ -0.64
ARHGEF40-203ENST00000554514 A0A096LPF7 62 aa11.05□□□□□ -0.64
ARHGEF40-203ENST00000554514 FHL2Q14192 279 aa11.05□□□□□ -0.64
ARHGEF40-203ENST00000554514 TRAV8-4A0A0B4J246 113 aa11.05□□□□□ -0.64
ARHGEF40-203ENST00000554514 C5orf38Q86SI9 138 aa11.04□□□□□ -0.64
ARHGEF40-203ENST00000554514 FAM19A3Q7Z5A8 133 aa11.03□□□□□ -0.64
ARHGEF40-203ENST00000554514 TRBV6-8A0A0A6YYG3 113 aa11.03□□□□□ -0.64
ARHGEF40-203ENST00000554514 COX7B2Q8TF08 81 aa11.03□□□□□ -0.64
ARHGEF40-203ENST00000554514 OVOL2Q9BRP0 275 aa11.03□□□□□ -0.64
ARHGEF40-203ENST00000554514 KRTAP10-3P60369 221 aa11.02□□□□□ -0.64
ARHGEF40-203ENST00000554514 CLPSL2Q6UWE3 100 aa11.02□□□□□ -0.64
ARHGEF40-203ENST00000554514 HECTD1Q9ULT8 2610 aa11.02□□□□□ -0.65
ARHGEF40-203ENST00000554514 HILS1P60008 231 aa11.02□□□□□ -0.65
ARHGEF40-203ENST00000554514 VWFP04275 2813 aa11.02□□□□□ -0.65
ARHGEF40-203ENST00000554514 MIR7-3HGQ8N6C7 128 aa11.02□□□□□ -0.65
ARHGEF40-203ENST00000554514 LINC00158P58513 81 aa11.01□□□□□ -0.65
ARHGEF40-203ENST00000554514 H3BT86 120 aa11□□□□□ -0.65
ARHGEF40-203ENST00000554514 PFN2P35080 140 aa11□□□□□ -0.65
ARHGEF40-203ENST00000554514 DEFB4AO15263 64 aa11□□□□□ -0.65
ARHGEF40-203ENST00000554514 SNCGO76070 127 aa11□□□□□ -0.65
ARHGEF40-203ENST00000554514 GYPEP15421 78 aa11□□□□□ -0.65
ARHGEF40-203ENST00000554514 LINC00482Q8N8I6 264 aa10.99□□□□□ -0.65
ARHGEF40-203ENST00000554514 COPS9Q8WXC6 57 aa10.99□□□□□ -0.65
ARHGEF40-203ENST00000554514 PPDPFQ9H3Y8 114 aa10.99□□□□□ -0.65
ARHGEF40-203ENST00000554514 SPATA3Q8NHX4 192 aa10.99□□□□□ -0.65
ARHGEF40-203ENST00000554514 COX7A2LO14548 114 aa10.98□□□□□ -0.65
ARHGEF40-203ENST00000554514 TTC32Q5I0X7 151 aa10.98□□□□□ -0.65
ARHGEF40-203ENST00000554514 XCL1P47992 114 aa10.98□□□□□ -0.65
ARHGEF40-203ENST00000554514 C15orf53Q8NAA6 179 aa10.97□□□□□ -0.65
ARHGEF40-203ENST00000554514 J3QKU1 62 aa10.96□□□□□ -0.65
ARHGEF40-203ENST00000554514 SND1-IT1Q9HBX3 110 aa10.96□□□□□ -0.65
ARHGEF40-203ENST00000554514 FAM218AQ96MZ4 157 aa10.96□□□□□ -0.66
ARHGEF40-203ENST00000554514 IGHV3OR16-9A0A0B4J2B5 98 aa10.95□□□□□ -0.66
ARHGEF40-203ENST00000554514 CRPP02741 224 aa10.95□□□□□ -0.66
ARHGEF40-203ENST00000554514 Q9HAA7 133 aa10.95□□□□□ -0.66
ARHGEF40-203ENST00000554514 GAGE2BQ13066 116 aa10.95□□□□□ -0.66
ARHGEF40-203ENST00000554514 GAGE2EQ4V326 116 aa10.95□□□□□ -0.66
ARHGEF40-203ENST00000554514 LINC00337Q8N6G1 96 aa10.95□□□□□ -0.66
ARHGEF40-203ENST00000554514 GAGE2DQ9UEU5 116 aa10.95□□□□□ -0.66
ARHGEF40-203ENST00000554514 LINC00959A0A1B0GUT2 108 aa10.94□□□□□ -0.66
ARHGEF40-203ENST00000554514 C5orf47Q569G3 176 aa10.94□□□□□ -0.66
ARHGEF40-203ENST00000554514 DEFB135Q30KP9 77 aa10.93□□□□□ -0.66
ARHGEF40-203ENST00000554514 C6orf226Q5I0X4 101 aa10.93□□□□□ -0.66
ARHGEF40-203ENST00000554514 LINC01600Q96MT4 127 aa10.93□□□□□ -0.66
ARHGEF40-203ENST00000554514 IGKV2-28A0A075B6P5 120 aa10.92□□□□□ -0.66
ARHGEF40-203ENST00000554514 IGKV2D-28P01615 120 aa10.92□□□□□ -0.66
ARHGEF40-203ENST00000554514 FAM222AQ5U5X8 452 aa10.92□□□□□ -0.66
ARHGEF40-203ENST00000554514 BAALC-AS2P0C853 105 aa10.91□□□□□ -0.66
ARHGEF40-203ENST00000554514 CCL18P55774 89 aa10.91□□□□□ -0.66
ARHGEF40-203ENST00000554514 X6R8D5 127 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 150.2 ms