RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 CCL3P10147 92 aa3.16□□□□□ -1.9
ATXN3-227ENST00000554491 ZNF32P17041 273 aa3.16□□□□□ -1.9
ATXN3-227ENST00000554491 FUSP35637 526 aaKnown RBP eCLIP3.16□□□□□ -1.9
ATXN3-227ENST00000554491 UBE2AP49459 152 aa3.16□□□□□ -1.9
ATXN3-227ENST00000554491 FXYD4P59646 89 aa3.16□□□□□ -1.9
ATXN3-227ENST00000554491 BLCAPP62952 87 aa3.16□□□□□ -1.9
ATXN3-227ENST00000554491 CIRBPQ14011 172 aaKnown RBP3.16□□□□□ -1.9
ATXN3-227ENST00000554491 KIAA0087Q14695 138 aa3.16□□□□□ -1.9
ATXN3-227ENST00000554491 ZNF826PQ6ZT77 177 aa3.16□□□□□ -1.9
ATXN3-227ENST00000554491 VMO1Q7Z5L0 202 aa3.16□□□□□ -1.9
ATXN3-227ENST00000554491 DYNAPQ8N1N2 210 aa3.16□□□□□ -1.9
ATXN3-227ENST00000554491 TMEM263Q8WUH6 116 aaKnown RBP3.16□□□□□ -1.9
ATXN3-227ENST00000554491 TTTY13Q9BZ97 58 aa3.16□□□□□ -1.9
ATXN3-227ENST00000554491 IGKV1-27A0A075B6S5 117 aa3.15□□□□□ -1.91
ATXN3-227ENST00000554491 IGHV4OR15-8A0A075B7B6 117 aa3.15□□□□□ -1.91
ATXN3-227ENST00000554491 IGHV3OR16-9A0A0B4J2B5 98 aa3.15□□□□□ -1.91
ATXN3-227ENST00000554491 A0A1B0GUT8 65 aa3.15□□□□□ -1.91
ATXN3-227ENST00000554491 TMEM223A0PJW6 202 aa3.15□□□□□ -1.91
ATXN3-227ENST00000554491 PINLYPA6NC86 204 aa3.15□□□□□ -1.91
ATXN3-227ENST00000554491 WNT9BO14905 357 aa3.15□□□□□ -1.91
ATXN3-227ENST00000554491 FSTL3O95633 263 aa3.15□□□□□ -1.91
ATXN3-227ENST00000554491 IGHV3-30P01768 117 aa3.15□□□□□ -1.91
ATXN3-227ENST00000554491 IGHV4-39P01824 125 aa3.15□□□□□ -1.91
ATXN3-227ENST00000554491 IGHV3-30-5P0DP03 117 aa3.15□□□□□ -1.91
ATXN3-227ENST00000554491 IAPPP10997 89 aa3.15□□□□□ -1.91
ATXN3-227ENST00000554491 SFTA2Q6UW10 78 aa3.15□□□□□ -1.91
ATXN3-227ENST00000554491 Q8N7P7 452 aa3.15□□□□□ -1.91
ATXN3-227ENST00000554491 TTTY12Q9BZ98 90 aa3.15□□□□□ -1.91
ATXN3-227ENST00000554491 SPRR3Q9UBC9 169 aa3.15□□□□□ -1.91
ATXN3-227ENST00000554491 IGHV4-30-2A0A087WSY4 118 aa3.14□□□□□ -1.91
ATXN3-227ENST00000554491 TRAV40A0A0B4J280 105 aa3.14□□□□□ -1.91
ATXN3-227ENST00000554491 A0A0J9YY99 117 aa3.14□□□□□ -1.91
ATXN3-227ENST00000554491 LOC100131303A0A0U1RQF7 123 aa3.14□□□□□ -1.91
ATXN3-227ENST00000554491 LOC389332A0A1B0GUA5 103 aa3.14□□□□□ -1.91
ATXN3-227ENST00000554491 IGKV1-5P01602 117 aa3.14□□□□□ -1.91
ATXN3-227ENST00000554491 IGHV4-30-4P0DP06 118 aa3.14□□□□□ -1.91
ATXN3-227ENST00000554491 IGHV4-31P0DP07 118 aa3.14□□□□□ -1.91
ATXN3-227ENST00000554491 S100A4P26447 101 aaKnown RBP3.14□□□□□ -1.91
ATXN3-227ENST00000554491 LINC00313P59037 77 aa3.14□□□□□ -1.91
ATXN3-227ENST00000554491 BRWD1-AS2P59051 145 aa3.14□□□□□ -1.91
ATXN3-227ENST00000554491 PIGYQ3MUY2 71 aa3.14□□□□□ -1.91
ATXN3-227ENST00000554491 GPHB5Q86YW7 130 aa3.14□□□□□ -1.91
ATXN3-227ENST00000554491 ORMDL3Q8N138 153 aa3.14□□□□□ -1.91
ATXN3-227ENST00000554491 LINC00337Q8N6G1 96 aa3.14□□□□□ -1.91
ATXN3-227ENST00000554491 Q9HAA7 133 aa3.14□□□□□ -1.91
ATXN3-227ENST00000554491 CADP27708 2225 aa3.13□□□□□ -1.91
ATXN3-227ENST00000554491 PRR14LQ5THK1 2151 aa3.13□□□□□ -1.91
ATXN3-227ENST00000554491 IGKV1D-17A0A075B6S4 117 aa3.13□□□□□ -1.91
ATXN3-227ENST00000554491 IGHV3-15A0A0B4J1V0 119 aa3.13□□□□□ -1.91
ATXN3-227ENST00000554491 A6NN06 94 aa3.13□□□□□ -1.91
ATXN3-227ENST00000554491 ZNF815PA8K554 130 aa3.13□□□□□ -1.91
ATXN3-227ENST00000554491 F8VRH5 84 aa3.13□□□□□ -1.91
ATXN3-227ENST00000554491 F8WEM9 126 aa3.13□□□□□ -1.91
ATXN3-227ENST00000554491 BUB1B-PAK6H3BSN5 160 aa3.13□□□□□ -1.91
ATXN3-227ENST00000554491 ERC2-IT1O76042 136 aa3.13□□□□□ -1.91
ATXN3-227ENST00000554491 EDDM3BP56851 147 aa3.13□□□□□ -1.91
ATXN3-227ENST00000554491 PRR3P79522 188 aaKnown RBP3.13□□□□□ -1.91
ATXN3-227ENST00000554491 EIF4EBP1Q13541 118 aaPredicted RBP3.13□□□□□ -1.91
ATXN3-227ENST00000554491 ZNF491Q8N8L2 437 aa3.13□□□□□ -1.91
ATXN3-227ENST00000554491 UBALD1Q8TB05 177 aa3.13□□□□□ -1.91
ATXN3-227ENST00000554491 DYNC2H1Q8NCM8 4307 aaKnown RBP3.12□□□□□ -1.91
ATXN3-227ENST00000554491 ALPK2Q86TB3 2170 aa3.12□□□□□ -1.91
ATXN3-227ENST00000554491 IGKV1-6A0A0C4DH72 117 aa3.12□□□□□ -1.91
ATXN3-227ENST00000554491 A0A0G2JRQ6 117 aa3.12□□□□□ -1.91
ATXN3-227ENST00000554491 SH2D1AO60880 128 aa3.12□□□□□ -1.91
ATXN3-227ENST00000554491 MIFP14174 115 aa3.12□□□□□ -1.91
ATXN3-227ENST00000554491 ZNF137PP52743 207 aa3.12□□□□□ -1.91
ATXN3-227ENST00000554491 Q1RN00 199 aa3.12□□□□□ -1.91
ATXN3-227ENST00000554491 LINC01554Q52M75 96 aa3.12□□□□□ -1.91
ATXN3-227ENST00000554491 Q75L30 129 aa3.12□□□□□ -1.91
ATXN3-227ENST00000554491 NOTCH2NLQ7Z3S9 236 aa3.12□□□□□ -1.91
ATXN3-227ENST00000554491 BPESC1Q9GZL8 116 aa3.12□□□□□ -1.91
ATXN3-227ENST00000554491 CCL28Q9NRJ3 127 aa3.12□□□□□ -1.91
ATXN3-227ENST00000554491 PHLDA3Q9Y5J5 127 aa3.12□□□□□ -1.91
ATXN3-227ENST00000554491 TENM3Q9P273 2699 aa3.12□□□□□ -1.91
ATXN3-227ENST00000554491 PLCE1Q9P212 2302 aa3.11□□□□□ -1.91
ATXN3-227ENST00000554491 HERC2O95714 4834 aa3.11□□□□□ -1.91
ATXN3-227ENST00000554491 IGHV3OR16-10A0A075B7F0 116 aa3.11□□□□□ -1.91
ATXN3-227ENST00000554491 A0A087X002 238 aa3.11□□□□□ -1.91
ATXN3-227ENST00000554491 IGKV1D-13A0A0B4J2D9 117 aa3.11□□□□□ -1.91
ATXN3-227ENST00000554491 TRBV6-1A0A0K0K1D8 114 aa3.11□□□□□ -1.91
ATXN3-227ENST00000554491 E7EUB6 86 aa3.11□□□□□ -1.91
ATXN3-227ENST00000554491 PSPHP1O15172 72 aa3.11□□□□□ -1.91
ATXN3-227ENST00000554491 P0C879 139 aa3.11□□□□□ -1.91
ATXN3-227ENST00000554491 IGKV1-13P0DP09 117 aa3.11□□□□□ -1.91
ATXN3-227ENST00000554491 CD28P10747 220 aa3.11□□□□□ -1.91
ATXN3-227ENST00000554491 RNASE4P34096 147 aaKnown RBP3.11□□□□□ -1.91
ATXN3-227ENST00000554491 SEC61BP60468 96 aaKnown RBP3.11□□□□□ -1.91
ATXN3-227ENST00000554491 ASB16-AS1Q495Z4 193 aa3.11□□□□□ -1.91
ATXN3-227ENST00000554491 SOSTDC1Q6X4U4 206 aa3.11□□□□□ -1.91
ATXN3-227ENST00000554491 KRTAP7-1Q8IUC3 87 aa3.11□□□□□ -1.91
ATXN3-227ENST00000554491 LINC00269Q8N2A0 174 aa3.11□□□□□ -1.91
ATXN3-227ENST00000554491 FAM216BQ8N7L0 139 aa3.11□□□□□ -1.91
ATXN3-227ENST00000554491 C11orf72Q8NBR9 251 aa3.11□□□□□ -1.91
ATXN3-227ENST00000554491 SMAD5-AS1Q9Y6J3 95 aa3.11□□□□□ -1.91
ATXN3-227ENST00000554491 ICOSQ9Y6W8 199 aa3.11□□□□□ -1.91
ATXN3-227ENST00000554491 KIAA2026Q5HYC2 2103 aa3.11□□□□□ -1.91
ATXN3-227ENST00000554491 D6R8Y8 96 aa3.1□□□□□ -1.91
ATXN3-227ENST00000554491 IGKV1-39P01597 117 aa3.1□□□□□ -1.91
ATXN3-227ENST00000554491 TRBV12-3P01733 135 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms