RNA–Protein interactions for RNA: ENST00000552773.1

RFX4-210, Transcript of regulatory factor X4, humanhuman

TSL 1 (best)

Gene RFX4, Length 1,659 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-210ENST00000552773 TRBV10-2A0A0K0K1G8 114 aa7.34□□□□□ -1.23
RFX4-210ENST00000552773 PAX4O43316 350 aa7.34□□□□□ -1.23
RFX4-210ENST00000552773 GYPEP15421 78 aa7.34□□□□□ -1.23
RFX4-210ENST00000552773 GAGE6Q13070 117 aa7.34□□□□□ -1.23
RFX4-210ENST00000552773 ADAMTSL4-AS1Q5T5F5 129 aa7.34□□□□□ -1.23
RFX4-210ENST00000552773 ANKRD29Q8N6D5 301 aa7.34□□□□□ -1.23
RFX4-210ENST00000552773 CITED1Q99966 193 aa7.34□□□□□ -1.23
RFX4-210ENST00000552773 CENPEQ02224 2701 aa7.33□□□□□ -1.24
RFX4-210ENST00000552773 FLNAP21333 2647 aaKnown RBP7.33□□□□□ -1.24
RFX4-210ENST00000552773 ZANQ9Y493 2812 aa7.33□□□□□ -1.24
RFX4-210ENST00000552773 A0A087WZ39 114 aa7.33□□□□□ -1.24
RFX4-210ENST00000552773 IBA57-AS1B1ANH7 110 aa7.33□□□□□ -1.24
RFX4-210ENST00000552773 C9JAW5 83 aa7.33□□□□□ -1.24
RFX4-210ENST00000552773 INAFM1C9JVW0 142 aa7.33□□□□□ -1.24
RFX4-210ENST00000552773 WIPF1O43516 503 aa7.33□□□□□ -1.24
RFX4-210ENST00000552773 KRTAP10-3P60369 221 aa7.33□□□□□ -1.24
RFX4-210ENST00000552773 LINC01620Q4KN68 170 aa7.33□□□□□ -1.24
RFX4-210ENST00000552773 SMR3AQ99954 134 aa7.33□□□□□ -1.24
RFX4-210ENST00000552773 X6R8D5 127 aa7.33□□□□□ -1.24
RFX4-210ENST00000552773 RPL13AP40429 203 aaKnown RBP7.32□□□□□ -1.24
RFX4-210ENST00000552773 WFDC9Q8NEX5 89 aa7.32□□□□□ -1.24
RFX4-210ENST00000552773 MAP1AP78559 2803 aaPredicted RBP7.32□□□□□ -1.24
RFX4-210ENST00000552773 VPS13CQ709C8 3753 aa7.32□□□□□ -1.24
RFX4-210ENST00000552773 TRIAP1O43715 76 aa7.32□□□□□ -1.24
RFX4-210ENST00000552773 ATP5G1P05496 136 aa7.32□□□□□ -1.24
RFX4-210ENST00000552773 SPART-AS1P0CW21 52 aa7.32□□□□□ -1.24
RFX4-210ENST00000552773 CXCL5P42830 114 aa7.32□□□□□ -1.24
RFX4-210ENST00000552773 DAD1P61803 113 aa7.32□□□□□ -1.24
RFX4-210ENST00000552773 CARD19Q96LW7 228 aa7.32□□□□□ -1.24
RFX4-210ENST00000552773 CCDC168Q8NDH2 2452 aa7.31□□□□□ -1.24
RFX4-210ENST00000552773 SONP18583 2426 aaKnown RBP7.31□□□□□ -1.24
RFX4-210ENST00000552773 IGHV3OR16-9A0A0B4J2B5 98 aa7.31□□□□□ -1.24
RFX4-210ENST00000552773 LOC100131303A0A0U1RQF7 123 aa7.31□□□□□ -1.24
RFX4-210ENST00000552773 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.31□□□□□ -1.24
RFX4-210ENST00000552773 MUC7Q8TAX7 377 aa7.31□□□□□ -1.24
RFX4-210ENST00000552773 TLN2Q9Y4G6 2542 aa7.3□□□□□ -1.24
RFX4-210ENST00000552773 LINC00959A0A1B0GUT2 108 aa7.3□□□□□ -1.24
RFX4-210ENST00000552773 A8MZ25 164 aa7.3□□□□□ -1.24
RFX4-210ENST00000552773 SMCPP49901 116 aaPredicted RBP7.3□□□□□ -1.24
RFX4-210ENST00000552773 MRPL23Q16540 153 aaKnown RBP7.3□□□□□ -1.24
RFX4-210ENST00000552773 SVIPQ8NHG7 77 aa7.3□□□□□ -1.24
RFX4-210ENST00000552773 WNK1Q9H4A3 2382 aa7.29□□□□□ -1.24
RFX4-210ENST00000552773 LST1O00453 97 aa7.29□□□□□ -1.24
RFX4-210ENST00000552773 COX7A2LO14548 114 aa7.29□□□□□ -1.24
RFX4-210ENST00000552773 CRPP02741 224 aa7.29□□□□□ -1.24
RFX4-210ENST00000552773 C6orf226Q5I0X4 101 aa7.28□□□□□ -1.24
RFX4-210ENST00000552773 C2orf82Q6UX34 121 aa7.28□□□□□ -1.24
RFX4-210ENST00000552773 Q8IZM0 81 aa7.28□□□□□ -1.24
RFX4-210ENST00000552773 MTURNQ8N3F0 131 aa7.28□□□□□ -1.24
RFX4-210ENST00000552773 TOMM7Q9P0U1 55 aa7.28□□□□□ -1.24
RFX4-210ENST00000552773 ZFHX3Q15911 3703 aa7.28□□□□□ -1.24
RFX4-210ENST00000552773 TRACP01848 142 aa7.28□□□□□ -1.24
RFX4-210ENST00000552773 LINC00158P58513 81 aa7.28□□□□□ -1.24
RFX4-210ENST00000552773 NPC2P61916 151 aa7.28□□□□□ -1.24
RFX4-210ENST00000552773 COX17Q14061 63 aa7.28□□□□□ -1.24
RFX4-210ENST00000552773 UBE2WQ96B02 151 aa7.28□□□□□ -1.24
RFX4-210ENST00000552773 IGLV4-60A0A075B6I1 120 aa7.27□□□□□ -1.25
RFX4-210ENST00000552773 EIF4EBP3O60516 100 aaPredicted RBP7.27□□□□□ -1.25
RFX4-210ENST00000552773 DEFB135Q30KP9 77 aa7.27□□□□□ -1.25
RFX4-210ENST00000552773 SHISA2Q6UWI4 295 aa7.27□□□□□ -1.25
RFX4-210ENST00000552773 PDZD2O15018 2839 aa7.27□□□□□ -1.25
RFX4-210ENST00000552773 KMT2BQ9UMN6 2715 aaPredicted RBP7.27□□□□□ -1.25
RFX4-210ENST00000552773 IGHV4-28A0A0C4DH34 117 aa7.26□□□□□ -1.25
RFX4-210ENST00000552773 IGKV3OR2-268A0A0C4DH90 116 aa7.26□□□□□ -1.25
RFX4-210ENST00000552773 H0YGX0 51 aa7.26□□□□□ -1.25
RFX4-210ENST00000552773 CD164L2Q6UWJ8 174 aa7.26□□□□□ -1.25
RFX4-210ENST00000552773 SND1-IT1Q9HBX3 110 aa7.26□□□□□ -1.25
RFX4-210ENST00000552773 SNCGO76070 127 aa7.25□□□□□ -1.25
RFX4-210ENST00000552773 RPL28P46779 137 aaKnown RBP7.25□□□□□ -1.25
RFX4-210ENST00000552773 CKS1BP61024 79 aa7.25□□□□□ -1.25
RFX4-210ENST00000552773 CFAP161Q6P656 301 aa7.25□□□□□ -1.25
RFX4-210ENST00000552773 DAND5Q8N907 189 aa7.25□□□□□ -1.25
RFX4-210ENST00000552773 CSMD2Q7Z408 3487 aa7.25□□□□□ -1.25
RFX4-210ENST00000552773 H3BNG1 76 aa7.25□□□□□ -1.25
RFX4-210ENST00000552773 ACYP1P07311 99 aa7.25□□□□□ -1.25
RFX4-210ENST00000552773 LELP1Q5T871 98 aa7.25□□□□□ -1.25
RFX4-210ENST00000552773 MIR7-3HGQ8N6C7 128 aa7.25□□□□□ -1.25
RFX4-210ENST00000552773 FAM240AA0A1B0GVK7 77 aa7.24□□□□□ -1.25
RFX4-210ENST00000552773 MALP21145 153 aa7.24□□□□□ -1.25
RFX4-210ENST00000552773 Q8NAQ8 132 aa7.24□□□□□ -1.25
RFX4-210ENST00000552773 CHD6Q8TD26 2715 aa7.24□□□□□ -1.25
RFX4-210ENST00000552773 TRAV8-4A0A0B4J246 113 aa7.23□□□□□ -1.25
RFX4-210ENST00000552773 A0A0U1RRA0 63 aa7.23□□□□□ -1.25
RFX4-210ENST00000552773 C5orf38Q86SI9 138 aa7.23□□□□□ -1.25
RFX4-210ENST00000552773 NTN5Q8WTR8 489 aaPredicted RBP7.23□□□□□ -1.25
RFX4-210ENST00000552773 UNC79Q9P2D8 2635 aa7.23□□□□□ -1.25
RFX4-210ENST00000552773 DNAL4O96015 105 aa7.22□□□□□ -1.25
RFX4-210ENST00000552773 ANGP03950 147 aaKnown RBP7.22□□□□□ -1.25
RFX4-210ENST00000552773 IGHV4-30-4P0DP06 118 aa7.22□□□□□ -1.25
RFX4-210ENST00000552773 XCL1P47992 114 aa7.22□□□□□ -1.25
RFX4-210ENST00000552773 REG3AQ06141 175 aa7.22□□□□□ -1.25
RFX4-210ENST00000552773 NDUFC2O95298 119 aa7.21□□□□□ -1.26
RFX4-210ENST00000552773 INAFM2P0DMQ5 153 aa7.21□□□□□ -1.26
RFX4-210ENST00000552773 DEFB121Q5J5C9 76 aa7.21□□□□□ -1.26
RFX4-210ENST00000552773 SOSTDC1Q6X4U4 206 aa7.21□□□□□ -1.26
RFX4-210ENST00000552773 A0A1B0GX51 115 aa7.2□□□□□ -1.26
RFX4-210ENST00000552773 LINC00269Q8N2A0 174 aa7.2□□□□□ -1.26
RFX4-210ENST00000552773 CHCHD10Q8WYQ3 142 aaPredicted RBP7.2□□□□□ -1.26
RFX4-210ENST00000552773 CLEC2BQ92478 149 aa7.2□□□□□ -1.26
RFX4-210ENST00000552773 ACANP16112 2415 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms