RNA–Protein interactions for RNA: ENST00000552412.1

CCDC59-206, Transcript of coiled-coil domain containing 59, humanhuman

TSL 3

Gene CCDC59, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-206ENST00000552412 HERV-K104P63124 156 aa4.81□□□□□ -1.64
CCDC59-206ENST00000552412 MIAQ16674 131 aa4.81□□□□□ -1.64
CCDC59-206ENST00000552412 LINC00242Q5T6M2 205 aa4.81□□□□□ -1.64
CCDC59-206ENST00000552412 SFTA2Q6UW10 78 aa4.81□□□□□ -1.64
CCDC59-206ENST00000552412 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.81□□□□□ -1.64
CCDC59-206ENST00000552412 LITAFQ99732 161 aa4.81□□□□□ -1.64
CCDC59-206ENST00000552412 PRO0255Q9UI72 69 aa4.81□□□□□ -1.64
CCDC59-206ENST00000552412 HIVEP1P15822 2718 aa4.81□□□□□ -1.64
CCDC59-206ENST00000552412 TRAV26-1A0A087WT03 109 aa4.8□□□□□ -1.64
CCDC59-206ENST00000552412 TRAV8-3A0A0A6YYJ7 113 aa4.8□□□□□ -1.64
CCDC59-206ENST00000552412 TSPAN13O95857 204 aa4.8□□□□□ -1.64
CCDC59-206ENST00000552412 SPINK8P0C7L1 97 aa4.8□□□□□ -1.64
CCDC59-206ENST00000552412 CFC1BP0CG36 223 aa4.8□□□□□ -1.64
CCDC59-206ENST00000552412 CFC1P0CG37 223 aa4.8□□□□□ -1.64
CCDC59-206ENST00000552412 CIRBPQ14011 172 aaKnown RBP4.8□□□□□ -1.64
CCDC59-206ENST00000552412 OCIAD2Q56VL3 154 aa4.8□□□□□ -1.64
CCDC59-206ENST00000552412 RNASE13Q5GAN3 156 aaKnown RBP4.8□□□□□ -1.64
CCDC59-206ENST00000552412 LINC01561Q8N1V8 128 aa4.8□□□□□ -1.64
CCDC59-206ENST00000552412 NAA38Q9BRA0 125 aaKnown RBP4.8□□□□□ -1.64
CCDC59-206ENST00000552412 CDKN2A-AS1Q9UH64 79 aa4.8□□□□□ -1.64
CCDC59-206ENST00000552412 PRO1854Q9UHT4 67 aa4.8□□□□□ -1.64
CCDC59-206ENST00000552412 IGHV3-64A0A075B6Q5 118 aa4.79□□□□□ -1.64
CCDC59-206ENST00000552412 A0A1B0GUV1 79 aa4.79□□□□□ -1.64
CCDC59-206ENST00000552412 A4D1N5 150 aa4.79□□□□□ -1.64
CCDC59-206ENST00000552412 SMIM1B2RUZ4 78 aa4.79□□□□□ -1.64
CCDC59-206ENST00000552412 APOMO95445 188 aa4.79□□□□□ -1.64
CCDC59-206ENST00000552412 SH2D6Q7Z4S9 175 aa4.79□□□□□ -1.64
CCDC59-206ENST00000552412 ATP6V0E2Q8NHE4 81 aa4.79□□□□□ -1.64
CCDC59-206ENST00000552412 CBY1Q9Y3M2 126 aa4.79□□□□□ -1.64
CCDC59-206ENST00000552412 A8MZ25 164 aa4.78□□□□□ -1.64
CCDC59-206ENST00000552412 F5H768 121 aa4.78□□□□□ -1.64
CCDC59-206ENST00000552412 M0QXV9 152 aa4.78□□□□□ -1.64
CCDC59-206ENST00000552412 IGHV3-33P01772 117 aa4.78□□□□□ -1.64
CCDC59-206ENST00000552412 DEFB130BP0DP73 79 aa4.78□□□□□ -1.64
CCDC59-206ENST00000552412 DEFB130AP0DP74 79 aa4.78□□□□□ -1.64
CCDC59-206ENST00000552412 MUSTN1Q8IVN3 82 aa4.78□□□□□ -1.64
CCDC59-206ENST00000552412 NIPBLQ6KC79 2804 aaeCLIP4.77□□□□□ -1.65
CCDC59-206ENST00000552412 TRAV13-1A0A0B4J241 112 aa4.77□□□□□ -1.65
CCDC59-206ENST00000552412 LOC100131303A0A0U1RQF7 123 aa4.77□□□□□ -1.65
CCDC59-206ENST00000552412 J3QR89 54 aa4.77□□□□□ -1.65
CCDC59-206ENST00000552412 GYPEP15421 78 aa4.77□□□□□ -1.65
CCDC59-206ENST00000552412 RBX1P62877 108 aa4.77□□□□□ -1.65
CCDC59-206ENST00000552412 COX6A2Q02221 97 aa4.77□□□□□ -1.65
CCDC59-206ENST00000552412 FAM222AQ5U5X8 452 aa4.77□□□□□ -1.65
CCDC59-206ENST00000552412 Q8NAQ8 132 aa4.77□□□□□ -1.65
CCDC59-206ENST00000552412 ZNF625Q96I27 306 aaPredicted RBP4.77□□□□□ -1.65
CCDC59-206ENST00000552412 CHCHD5Q9BSY4 110 aa4.77□□□□□ -1.65
CCDC59-206ENST00000552412 ERG28Q9UKR5 140 aa4.77□□□□□ -1.65
CCDC59-206ENST00000552412 F8P00451 2351 aa4.77□□□□□ -1.65
CCDC59-206ENST00000552412 TEP1Q99973 2627 aaKnown RBP4.76□□□□□ -1.65
CCDC59-206ENST00000552412 A0A087WZ39 114 aa4.76□□□□□ -1.65
CCDC59-206ENST00000552412 IGHV4-28A0A0C4DH34 117 aa4.76□□□□□ -1.65
CCDC59-206ENST00000552412 TRBV30A0A0K0K1B3 111 aa4.76□□□□□ -1.65
CCDC59-206ENST00000552412 ATP5G1P05496 136 aa4.76□□□□□ -1.65
CCDC59-206ENST00000552412 SPART-AS1P0CW21 52 aa4.76□□□□□ -1.65
CCDC59-206ENST00000552412 DAD1P61803 113 aa4.76□□□□□ -1.65
CCDC59-206ENST00000552412 GAGE6Q13070 117 aa4.76□□□□□ -1.65
CCDC59-206ENST00000552412 DEFB135Q30KP9 77 aa4.76□□□□□ -1.65
CCDC59-206ENST00000552412 LCE1DQ5T752 114 aa4.76□□□□□ -1.65
CCDC59-206ENST00000552412 Q9H8V8 135 aa4.76□□□□□ -1.65
CCDC59-206ENST00000552412 PRO0461Q9UI25 63 aa4.76□□□□□ -1.65
CCDC59-206ENST00000552412 ATRQ13535 2644 aa4.76□□□□□ -1.65
CCDC59-206ENST00000552412 IGHV3OR16-9A0A0B4J2B5 98 aa4.75□□□□□ -1.65
CCDC59-206ENST00000552412 LOC107984156A0A0G2JMH3 177 aa4.75□□□□□ -1.65
CCDC59-206ENST00000552412 H3BMG7 143 aa4.75□□□□□ -1.65
CCDC59-206ENST00000552412 PRSS2P07478 247 aa4.75□□□□□ -1.65
CCDC59-206ENST00000552412 IGHV4-30-4P0DP06 118 aa4.75□□□□□ -1.65
CCDC59-206ENST00000552412 ADAMTSL4-AS1Q5T5F5 129 aa4.75□□□□□ -1.65
CCDC59-206ENST00000552412 PRIMA1Q86XR5 153 aa4.75□□□□□ -1.65
CCDC59-206ENST00000552412 ARL17AQ8IVW1 177 aa4.75□□□□□ -1.65
CCDC59-206ENST00000552412 SPATA3Q8NHX4 192 aa4.75□□□□□ -1.65
CCDC59-206ENST00000552412 COX7B2Q8TF08 81 aa4.75□□□□□ -1.65
CCDC59-206ENST00000552412 LINC01600Q96MT4 127 aa4.75□□□□□ -1.65
CCDC59-206ENST00000552412 IGLV4-60A0A075B6I1 120 aa4.74□□□□□ -1.65
CCDC59-206ENST00000552412 LINC00959A0A1B0GUT2 108 aa4.74□□□□□ -1.65
CCDC59-206ENST00000552412 G3V4G9 280 aa4.74□□□□□ -1.65
CCDC59-206ENST00000552412 H3BNG1 76 aa4.74□□□□□ -1.65
CCDC59-206ENST00000552412 COX6CP09669 75 aa4.74□□□□□ -1.65
CCDC59-206ENST00000552412 SCGB1C2P0DMR2 95 aa4.74□□□□□ -1.65
CCDC59-206ENST00000552412 EGFEM1PQ0D2K5 195 aa4.74□□□□□ -1.65
CCDC59-206ENST00000552412 SS18Q15532 418 aa4.74□□□□□ -1.65
CCDC59-206ENST00000552412 ATXN8Q156A1 80 aa4.74□□□□□ -1.65
CCDC59-206ENST00000552412 MRPL23Q16540 153 aaKnown RBP4.74□□□□□ -1.65
CCDC59-206ENST00000552412 LINC00308Q8TCZ7 52 aa4.74□□□□□ -1.65
CCDC59-206ENST00000552412 VWFP04275 2813 aa4.73□□□□□ -1.65
CCDC59-206ENST00000552412 IBA57-AS1B1ANH7 110 aa4.73□□□□□ -1.65
CCDC59-206ENST00000552412 TCL1BO95988 128 aa4.73□□□□□ -1.65
CCDC59-206ENST00000552412 CXCL5P42830 114 aa4.73□□□□□ -1.65
CCDC59-206ENST00000552412 PSMB2P49721 201 aa4.73□□□□□ -1.65
CCDC59-206ENST00000552412 Q1RN00 199 aa4.73□□□□□ -1.65
CCDC59-206ENST00000552412 MEIG1Q5JSS6 88 aa4.73□□□□□ -1.65
CCDC59-206ENST00000552412 LELP1Q5T871 98 aa4.73□□□□□ -1.65
CCDC59-206ENST00000552412 C11orf68Q9H3H3 251 aaKnown RBP4.73□□□□□ -1.65
CCDC59-206ENST00000552412 ICOSQ9Y6W8 199 aa4.73□□□□□ -1.65
CCDC59-206ENST00000552412 WFDC2Q14508 124 aa4.72□□□□□ -1.65
CCDC59-206ENST00000552412 Q8IZM0 81 aa4.72□□□□□ -1.65
CCDC59-206ENST00000552412 MUC7Q8TAX7 377 aa4.72□□□□□ -1.65
CCDC59-206ENST00000552412 TENM1Q9UKZ4 2725 aa4.72□□□□□ -1.65
CCDC59-206ENST00000552412 DNAH3Q8TD57 4116 aa4.71□□□□□ -1.66
CCDC59-206ENST00000552412 TRAV13-2A0A0B4J235 113 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms