RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 KDM5AP29375 1690 aaKnown RBP0.16□□□□□ -2.38
USP44-207ENST00000552237 PPRC1Q5VV67 1664 aaKnown RBP0.16□□□□□ -2.38
USP44-207ENST00000552237 ZMYM4Q5VZL5 1548 aa0.16□□□□□ -2.38
USP44-207ENST00000552237 ARHGEF12Q9NZN5 1544 aa0.16□□□□□ -2.38
USP44-207ENST00000552237 MEGF8Q7Z7M0 2845 aa0.16□□□□□ -2.38
USP44-207ENST00000552237 A2ML1A8K2U0 1454 aa0.16□□□□□ -2.38
USP44-207ENST00000552237 COL7A1Q02388 2944 aa0.15□□□□□ -2.39
USP44-207ENST00000552237 SYNE1Q8NF91 8797 aaKnown RBP0.15□□□□□ -2.39
USP44-207ENST00000552237 RIMS1Q86UR5 1692 aaKnown RBP0.15□□□□□ -2.39
USP44-207ENST00000552237 HRNRQ86YZ3 2850 aaPredicted RBP0.15□□□□□ -2.39
USP44-207ENST00000552237 CLPSL1A2RUU4 121 aa0.15□□□□□ -2.39
USP44-207ENST00000552237 SAA2P0DJI9 122 aaPredicted RBP0.15□□□□□ -2.39
USP44-207ENST00000552237 FAM167A-AS1Q96KT0 104 aa0.15□□□□□ -2.39
USP44-207ENST00000552237 CGREF1Q99674 301 aa0.15□□□□□ -2.39
USP44-207ENST00000552237 A0A0G2JMZ2 1700 aa0.15□□□□□ -2.39
USP44-207ENST00000552237 ZNF236Q9UL36 1845 aa0.15□□□□□ -2.39
USP44-207ENST00000552237 FLNAP21333 2647 aaKnown RBP0.15□□□□□ -2.39
USP44-207ENST00000552237 MYOM1P52179 1685 aa0.14□□□□□ -2.39
USP44-207ENST00000552237 C10orf71Q711Q0 1435 aa0.14□□□□□ -2.39
USP44-207ENST00000552237 PAPPAQ13219 1627 aa0.14□□□□□ -2.39
USP44-207ENST00000552237 NUP188Q5SRE5 1749 aa0.14□□□□□ -2.39
USP44-207ENST00000552237 C20orf202A1L168 122 aa0.14□□□□□ -2.39
USP44-207ENST00000552237 H3BQF6 201 aa0.14□□□□□ -2.39
USP44-207ENST00000552237 BCE1O60756 84 aa0.14□□□□□ -2.39
USP44-207ENST00000552237 SPRR1AP35321 89 aa0.14□□□□□ -2.39
USP44-207ENST00000552237 SNCAP37840 140 aa0.14□□□□□ -2.39
USP44-207ENST00000552237 SEC11AP67812 179 aa0.14□□□□□ -2.39
USP44-207ENST00000552237 LSM10Q969L4 123 aaKnown RBP0.14□□□□□ -2.39
USP44-207ENST00000552237 TCEAL7Q9BRU2 100 aa0.14□□□□□ -2.39
USP44-207ENST00000552237 PSENENQ9NZ42 101 aa0.14□□□□□ -2.39
USP44-207ENST00000552237 BCL9LQ86UU0 1499 aa0.14□□□□□ -2.39
USP44-207ENST00000552237 GVINP1Q7Z2Y8 2422 aa0.14□□□□□ -2.39
USP44-207ENST00000552237 TOP2BQ02880 1626 aa0.13□□□□□ -2.39
USP44-207ENST00000552237 ABCA3Q99758 1704 aa0.13□□□□□ -2.39
USP44-207ENST00000552237 FLNCQ14315 2725 aa0.13□□□□□ -2.39
USP44-207ENST00000552237 FAT4Q6V0I7 4981 aa0.13□□□□□ -2.39
USP44-207ENST00000552237 TMEM262E9PQX1 116 aa0.13□□□□□ -2.39
USP44-207ENST00000552237 K7EQZ3 153 aa0.13□□□□□ -2.39
USP44-207ENST00000552237 CORTO00230 105 aa0.13□□□□□ -2.39
USP44-207ENST00000552237 DLEU1O43261 78 aa0.13□□□□□ -2.39
USP44-207ENST00000552237 KRTAP2-3P0C7H8 128 aa0.13□□□□□ -2.39
USP44-207ENST00000552237 LINC00032P0C843 101 aa0.13□□□□□ -2.39
USP44-207ENST00000552237 IGLC1P0CG04 106 aa0.13□□□□□ -2.39
USP44-207ENST00000552237 GNGT1P63211 74 aa0.13□□□□□ -2.39
USP44-207ENST00000552237 Q0VG73 95 aa0.13□□□□□ -2.39
USP44-207ENST00000552237 PMCHL1Q16048 86 aa0.13□□□□□ -2.39
USP44-207ENST00000552237 TSLPQ969D9 159 aa0.13□□□□□ -2.39
USP44-207ENST00000552237 KRTAP2-4Q9BYR9 128 aa0.13□□□□□ -2.39
USP44-207ENST00000552237 KRTAP2-1Q9BYU5 128 aa0.13□□□□□ -2.39
USP44-207ENST00000552237 GAPVD1Q14C86 1478 aa0.13□□□□□ -2.39
USP44-207ENST00000552237 MBD5Q9P267 1494 aa0.13□□□□□ -2.39
USP44-207ENST00000552237 TET3O43151 1660 aa0.13□□□□□ -2.39
USP44-207ENST00000552237 ARHGAP5Q13017 1502 aa0.13□□□□□ -2.39
USP44-207ENST00000552237 SCAPERQ9BY12 1400 aa0.13□□□□□ -2.39
USP44-207ENST00000552237 CHD8Q9HCK8 2581 aa0.12□□□□□ -2.39
USP44-207ENST00000552237 QRICH2Q9H0J4 1663 aa0.12□□□□□ -2.39
USP44-207ENST00000552237 MAGI1Q96QZ7 1491 aaPredicted RBP0.12□□□□□ -2.39
USP44-207ENST00000552237 TRAV30A0A087WSZ9 112 aa0.12□□□□□ -2.39
USP44-207ENST00000552237 A0A1B0GV90 55 aa0.12□□□□□ -2.39
USP44-207ENST00000552237 OOSP1A8MZH6 123 aa0.12□□□□□ -2.39
USP44-207ENST00000552237 UQCRHP07919 91 aa0.12□□□□□ -2.39
USP44-207ENST00000552237 PSMG4Q5JS54 123 aa0.12□□□□□ -2.39
USP44-207ENST00000552237 C10orf113Q5VZT2 155 aa0.12□□□□□ -2.39
USP44-207ENST00000552237 FAM223AQ8IWN6 122 aa0.12□□□□□ -2.39
USP44-207ENST00000552237 CRIPTQ9P021 101 aa0.12□□□□□ -2.39
USP44-207ENST00000552237 NSD1Q96L73 2696 aaPredicted RBP0.12□□□□□ -2.39
USP44-207ENST00000552237 XRN1Q8IZH2 1706 aaKnown RBP0.12□□□□□ -2.39
USP44-207ENST00000552237 EHBP1L1Q8N3D4 1523 aa0.12□□□□□ -2.39
USP44-207ENST00000552237 ABCC2Q92887 1545 aa0.12□□□□□ -2.39
USP44-207ENST00000552237 UBR3Q6ZT12 1888 aa0.12□□□□□ -2.39
USP44-207ENST00000552237 DIP2CQ9Y2E4 1556 aa0.11□□□□□ -2.39
USP44-207ENST00000552237 ACANP16112 2415 aa0.11□□□□□ -2.39
USP44-207ENST00000552237 TMEM218A2RU14 115 aa0.11□□□□□ -2.39
USP44-207ENST00000552237 I3L3M4 83 aa0.11□□□□□ -2.39
USP44-207ENST00000552237 RPL38P63173 70 aaKnown RBP0.11□□□□□ -2.39
USP44-207ENST00000552237 DPH3P1Q9H4G8 78 aa0.11□□□□□ -2.39
USP44-207ENST00000552237 CDC42SE2Q9NRR3 84 aa0.11□□□□□ -2.39
USP44-207ENST00000552237 DCHS2Q6V1P9 2916 aa0.11□□□□□ -2.39
USP44-207ENST00000552237 CNOT1A5YKK6 2376 aaKnown RBP0.11□□□□□ -2.39
USP44-207ENST00000552237 ROBO1Q9Y6N7 1651 aa0.11□□□□□ -2.39
USP44-207ENST00000552237 MYH4Q9Y623 1939 aa0.11□□□□□ -2.39
USP44-207ENST00000552237 PKD1L1Q8TDX9 2849 aa0.1□□□□□ -2.39
USP44-207ENST00000552237 RGPD2P0DJD1 1756 aa0.1□□□□□ -2.39
USP44-207ENST00000552237 A0A1B0GU69 56 aa0.1□□□□□ -2.39
USP44-207ENST00000552237 MPC2O95563 127 aa0.1□□□□□ -2.39
USP44-207ENST00000552237 S100PP25815 95 aa0.1□□□□□ -2.39
USP44-207ENST00000552237 SMIM11AP58511 58 aa0.1□□□□□ -2.39
USP44-207ENST00000552237 UBE2D3P61077 147 aa0.1□□□□□ -2.39
USP44-207ENST00000552237 UBE2D2P62837 147 aa0.1□□□□□ -2.39
USP44-207ENST00000552237 SFTA2Q6UW10 78 aa0.1□□□□□ -2.39
USP44-207ENST00000552237 ZNF720Q7Z2F6 126 aa0.1□□□□□ -2.39
USP44-207ENST00000552237 DEFB105AQ8NG35 78 aa0.1□□□□□ -2.39
USP44-207ENST00000552237 LINC01600Q96MT4 127 aa0.1□□□□□ -2.39
USP44-207ENST00000552237 LINC00846Q9NV44 126 aa0.1□□□□□ -2.39
USP44-207ENST00000552237 VWFP04275 2813 aa0.1□□□□□ -2.39
USP44-207ENST00000552237 TOPAZ1Q8N9V7 1692 aa0.1□□□□□ -2.39
USP44-207ENST00000552237 ABCC5O15440 1437 aa0.1□□□□□ -2.39
USP44-207ENST00000552237 LRRC37AA6NMS7 1700 aa0.1□□□□□ -2.39
USP44-207ENST00000552237 UQCRHLA0A096LP55 91 aa0.09□□□□□ -2.4
USP44-207ENST00000552237 FAM223BA6NKX1 122 aa0.09□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms