RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 ABCA2Q9BZC7 2435 aa0.6□□□□□ -2.31
LSM6P2-201ENST00000552208 CSMD3Q7Z407 3707 aa0.6□□□□□ -2.31
LSM6P2-201ENST00000552208 COL6A5A8TX70 2615 aa0.6□□□□□ -2.31
LSM6P2-201ENST00000552208 VWFP04275 2813 aa0.6□□□□□ -2.31
LSM6P2-201ENST00000552208 FAM223BA6NKX1 122 aa0.6□□□□□ -2.31
LSM6P2-201ENST00000552208 PKIAP61925 76 aa0.6□□□□□ -2.31
LSM6P2-201ENST00000552208 CNFNQ9BYD5 112 aa0.6□□□□□ -2.31
LSM6P2-201ENST00000552208 KDM3BQ7LBC6 1761 aa0.6□□□□□ -2.31
LSM6P2-201ENST00000552208 KIAA1109Q2LD37 5005 aa0.59□□□□□ -2.31
LSM6P2-201ENST00000552208 SETXQ7Z333 2677 aaKnown RBP0.59□□□□□ -2.31
LSM6P2-201ENST00000552208 M0R3E3 92 aa0.59□□□□□ -2.31
LSM6P2-201ENST00000552208 NDUFC1O43677 76 aa0.59□□□□□ -2.31
LSM6P2-201ENST00000552208 BCE1O60756 84 aa0.59□□□□□ -2.31
LSM6P2-201ENST00000552208 LINC00032P0C843 101 aa0.59□□□□□ -2.31
LSM6P2-201ENST00000552208 SAA2P0DJI9 122 aaPredicted RBP0.59□□□□□ -2.31
LSM6P2-201ENST00000552208 TMEM263Q8WUH6 116 aaKnown RBP0.59□□□□□ -2.31
LSM6P2-201ENST00000552208 PMCHL2Q9BQD1 86 aa0.59□□□□□ -2.31
LSM6P2-201ENST00000552208 FAIMQ9NVQ4 179 aa0.59□□□□□ -2.31
LSM6P2-201ENST00000552208 AP4S1Q9Y587 144 aa0.59□□□□□ -2.31
LSM6P2-201ENST00000552208 MUC5BQ9HC84 5762 aaPredicted RBP0.59□□□□□ -2.32
LSM6P2-201ENST00000552208 USP9XQ93008 2570 aaPredicted RBP0.59□□□□□ -2.32
LSM6P2-201ENST00000552208 SETD2Q9BYW2 2564 aaPredicted RBP0.59□□□□□ -2.32
LSM6P2-201ENST00000552208 MAGI1Q96QZ7 1491 aaPredicted RBP0.59□□□□□ -2.32
LSM6P2-201ENST00000552208 NCOR1O75376 2440 aa0.58□□□□□ -2.32
LSM6P2-201ENST00000552208 MAST4O15021 2626 aa0.58□□□□□ -2.32
LSM6P2-201ENST00000552208 H7BZZ5 65 aa0.58□□□□□ -2.32
LSM6P2-201ENST00000552208 COL5A1-AS1Q5SY13 56 aa0.58□□□□□ -2.32
LSM6P2-201ENST00000552208 SPINK6Q6UWN8 80 aa0.58□□□□□ -2.32
LSM6P2-201ENST00000552208 MLH3Q9UHC1 1453 aa0.58□□□□□ -2.32
LSM6P2-201ENST00000552208 SCN7AQ01118 1682 aa0.58□□□□□ -2.32
LSM6P2-201ENST00000552208 CACNA1EQ15878 2313 aa0.58□□□□□ -2.32
LSM6P2-201ENST00000552208 TPRP12270 2363 aaKnown RBP0.57□□□□□ -2.32
LSM6P2-201ENST00000552208 TENM3Q9P273 2699 aa0.57□□□□□ -2.32
LSM6P2-201ENST00000552208 CELSR2Q9HCU4 2923 aa0.57□□□□□ -2.32
LSM6P2-201ENST00000552208 A0A0D9SFI3 127 aa0.57□□□□□ -2.32
LSM6P2-201ENST00000552208 CACFD1Q9UGQ2 172 aa0.57□□□□□ -2.32
LSM6P2-201ENST00000552208 SBF2Q86WG5 1849 aa0.57□□□□□ -2.32
LSM6P2-201ENST00000552208 DSTQ03001 7570 aaKnown RBP0.56□□□□□ -2.32
LSM6P2-201ENST00000552208 TROQ12816 1431 aaPredicted RBP0.56□□□□□ -2.32
LSM6P2-201ENST00000552208 A0A0G2JND7 137 aa0.56□□□□□ -2.32
LSM6P2-201ENST00000552208 I3L2K1 104 aa0.56□□□□□ -2.32
LSM6P2-201ENST00000552208 ATOX1O00244 68 aa0.56□□□□□ -2.32
LSM6P2-201ENST00000552208 UBA52P62987 128 aaKnown RBP0.56□□□□□ -2.32
LSM6P2-201ENST00000552208 KRTAP21-1Q3LI58 79 aa0.56□□□□□ -2.32
LSM6P2-201ENST00000552208 C10orf113Q5VZT2 155 aa0.56□□□□□ -2.32
LSM6P2-201ENST00000552208 ERCC6L2Q5T890 1561 aa0.56□□□□□ -2.32
LSM6P2-201ENST00000552208 LRP1Q07954 4544 aaKnown RBP0.56□□□□□ -2.32
LSM6P2-201ENST00000552208 ANKHD1Q8IWZ3 2542 aaKnown RBP0.56□□□□□ -2.32
LSM6P2-201ENST00000552208 ANKRD17O75179 2603 aaKnown RBP0.55□□□□□ -2.32
LSM6P2-201ENST00000552208 BPTFQ12830 3046 aa0.55□□□□□ -2.32
LSM6P2-201ENST00000552208 SERP2Q8N6R1 65 aa0.55□□□□□ -2.32
LSM6P2-201ENST00000552208 SYNE2Q8WXH0 6885 aaKnown RBP0.55□□□□□ -2.32
LSM6P2-201ENST00000552208 F8P00451 2351 aa0.55□□□□□ -2.32
LSM6P2-201ENST00000552208 TRBV7-7A0A0K0K1E9 115 aa0.54□□□□□ -2.32
LSM6P2-201ENST00000552208 A0A1B0GWA3 101 aa0.54□□□□□ -2.32
LSM6P2-201ENST00000552208 LINC00846Q9NV44 126 aa0.54□□□□□ -2.32
LSM6P2-201ENST00000552208 PRO0255Q9UI72 69 aa0.54□□□□□ -2.32
LSM6P2-201ENST00000552208 PLXNB2O15031 1838 aa0.54□□□□□ -2.32
LSM6P2-201ENST00000552208 WNK3Q9BYP7 1800 aa0.54□□□□□ -2.32
LSM6P2-201ENST00000552208 NEBP20929 6669 aa0.53□□□□□ -2.32
LSM6P2-201ENST00000552208 TRBV25-1A0A075B6N4 114 aa0.53□□□□□ -2.32
LSM6P2-201ENST00000552208 TRGV9Q99603 122 aa0.53□□□□□ -2.32
LSM6P2-201ENST00000552208 VAMP8Q9BV40 100 aa0.53□□□□□ -2.32
LSM6P2-201ENST00000552208 SPCS1Q9Y6A9 102 aa0.53□□□□□ -2.32
LSM6P2-201ENST00000552208 FSIP2Q5CZC0 6907 aa0.53□□□□□ -2.33
LSM6P2-201ENST00000552208 ANKRD26Q9UPS8 1709 aa0.52□□□□□ -2.33
LSM6P2-201ENST00000552208 TCHHQ07283 1943 aa0.52□□□□□ -2.33
LSM6P2-201ENST00000552208 LINC01600Q96MT4 127 aa0.52□□□□□ -2.33
LSM6P2-201ENST00000552208 TP53AIP1Q9HCN2 124 aa0.52□□□□□ -2.33
LSM6P2-201ENST00000552208 C1orf167Q5SNV9 1468 aa0.52□□□□□ -2.33
LSM6P2-201ENST00000552208 NRXN1Q9ULB1 1477 aa0.52□□□□□ -2.33
LSM6P2-201ENST00000552208 ARHGEF12Q9NZN5 1544 aa0.52□□□□□ -2.33
LSM6P2-201ENST00000552208 TNCP24821 2201 aa0.52□□□□□ -2.33
LSM6P2-201ENST00000552208 SYS1-DBNDD2H3BUS1 97 aa0.51□□□□□ -2.33
LSM6P2-201ENST00000552208 BTAF1O14981 1849 aa0.51□□□□□ -2.33
LSM6P2-201ENST00000552208 ASIPP42127 132 aa0.51□□□□□ -2.33
LSM6P2-201ENST00000552208 CACNA1CQ13936 2221 aa0.51□□□□□ -2.33
LSM6P2-201ENST00000552208 OTOGQ6ZRI0 2925 aa0.51□□□□□ -2.33
LSM6P2-201ENST00000552208 MYO18BQ8IUG5 2567 aa0.51□□□□□ -2.33
LSM6P2-201ENST00000552208 LCN9Q8WX39 176 aa0.51□□□□□ -2.33
LSM6P2-201ENST00000552208 CREBBPQ92793 2442 aa0.51□□□□□ -2.33
LSM6P2-201ENST00000552208 TULP4Q9NRJ4 1543 aa0.51□□□□□ -2.33
LSM6P2-201ENST00000552208 BIVM-ERCC5R4GMW8 1640 aa0.51□□□□□ -2.33
LSM6P2-201ENST00000552208 NAV2Q8IVL1 2488 aa0.5□□□□□ -2.33
LSM6P2-201ENST00000552208 SPTBN2O15020 2390 aa0.5□□□□□ -2.33
LSM6P2-201ENST00000552208 PLEKHH2Q8IVE3 1493 aa0.5□□□□□ -2.33
LSM6P2-201ENST00000552208 TENM4Q6N022 2769 aa0.5□□□□□ -2.33
LSM6P2-201ENST00000552208 HECTD1Q9ULT8 2610 aa0.5□□□□□ -2.33
LSM6P2-201ENST00000552208 A0A087WVE0 104 aa0.5□□□□□ -2.33
LSM6P2-201ENST00000552208 S100A3P33764 101 aa0.5□□□□□ -2.33
LSM6P2-201ENST00000552208 PMCHL1Q16048 86 aa0.5□□□□□ -2.33
LSM6P2-201ENST00000552208 PRO1933Q9H354 126 aa0.5□□□□□ -2.33
LSM6P2-201ENST00000552208 ZNF292O60281 2723 aa0.5□□□□□ -2.33
LSM6P2-201ENST00000552208 MARF1Q9Y4F3 1742 aaKnown RBP0.5□□□□□ -2.33
LSM6P2-201ENST00000552208 SONP18583 2426 aaKnown RBP0.49□□□□□ -2.33
LSM6P2-201ENST00000552208 SYNE1Q8NF91 8797 aaKnown RBP0.49□□□□□ -2.33
LSM6P2-201ENST00000552208 CHD6Q8TD26 2715 aa0.49□□□□□ -2.33
LSM6P2-201ENST00000552208 TRBV6-1A0A0K0K1D8 114 aa0.49□□□□□ -2.33
LSM6P2-201ENST00000552208 C7orf77A4D0Y5 90 aa0.49□□□□□ -2.33
LSM6P2-201ENST00000552208 KRTAP20-1Q3LI63 56 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms