RNA–Protein interactions for RNA: ENST00000550818.1

TSPAN8-205, Transcript of tetraspanin 8, humanhuman

TSL 1 (best)

Gene TSPAN8, Length 627 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-205ENST00000550818 ANKRD36A6QL64 1941 aa1.16□□□□□ -2.22
TSPAN8-205ENST00000550818 SIPA1L3O60292 1781 aaPredicted RBP1.16□□□□□ -2.22
TSPAN8-205ENST00000550818 COL6A6A6NMZ7 2263 aa1.15□□□□□ -2.22
TSPAN8-205ENST00000550818 HMGXB3Q12766 1538 aa1.15□□□□□ -2.22
TSPAN8-205ENST00000550818 ASXL1Q8IXJ9 1541 aa1.15□□□□□ -2.22
TSPAN8-205ENST00000550818 SYCP2Q9BX26 1530 aa1.15□□□□□ -2.22
TSPAN8-205ENST00000550818 PIK3C2BO00750 1634 aa1.15□□□□□ -2.22
TSPAN8-205ENST00000550818 NRXN2Q9P2S2 1712 aa1.15□□□□□ -2.22
TSPAN8-205ENST00000550818 A0A0G2JND7 137 aa1.15□□□□□ -2.23
TSPAN8-205ENST00000550818 TEX49A0A1B0GTD5 131 aa1.15□□□□□ -2.23
TSPAN8-205ENST00000550818 CLPSL1A2RUU4 121 aa1.15□□□□□ -2.23
TSPAN8-205ENST00000550818 SFTA3P0C7M3 94 aa1.15□□□□□ -2.23
TSPAN8-205ENST00000550818 SAA2P0DJI9 122 aaPredicted RBP1.15□□□□□ -2.23
TSPAN8-205ENST00000550818 COX8AP10176 69 aa1.15□□□□□ -2.23
TSPAN8-205ENST00000550818 PDE6GP18545 87 aa1.15□□□□□ -2.23
TSPAN8-205ENST00000550818 ZNF56Q15929 161 aa1.15□□□□□ -2.23
TSPAN8-205ENST00000550818 C10orf128Q5T292 105 aa1.15□□□□□ -2.23
TSPAN8-205ENST00000550818 CSAG1Q6PB30 78 aa1.15□□□□□ -2.23
TSPAN8-205ENST00000550818 FAM223AQ8IWN6 122 aa1.15□□□□□ -2.23
TSPAN8-205ENST00000550818 MANBALQ9NQG1 85 aa1.15□□□□□ -2.23
TSPAN8-205ENST00000550818 TMEM14BQ9NUH8 114 aa1.15□□□□□ -2.23
TSPAN8-205ENST00000550818 CD163L1Q9NR16 1453 aa1.15□□□□□ -2.23
TSPAN8-205ENST00000550818 ITSN2Q9NZM3 1697 aa1.15□□□□□ -2.23
TSPAN8-205ENST00000550818 DLEC1Q9Y238 1755 aa1.15□□□□□ -2.23
TSPAN8-205ENST00000550818 DNAJC13O75165 2243 aa1.15□□□□□ -2.23
TSPAN8-205ENST00000550818 TSC2P49815 1807 aa1.15□□□□□ -2.23
TSPAN8-205ENST00000550818 XRN1Q8IZH2 1706 aaKnown RBP1.15□□□□□ -2.23
TSPAN8-205ENST00000550818 EHBP1L1Q8N3D4 1523 aa1.15□□□□□ -2.23
TSPAN8-205ENST00000550818 PLCH1Q4KWH8 1693 aa1.14□□□□□ -2.23
TSPAN8-205ENST00000550818 RALGAPBQ86X10 1494 aa1.14□□□□□ -2.23
TSPAN8-205ENST00000550818 MYMXA0A1B0GTQ4 84 aa1.14□□□□□ -2.23
TSPAN8-205ENST00000550818 CHKB-CPT1BH3BT56 60 aa1.14□□□□□ -2.23
TSPAN8-205ENST00000550818 EDDM3BP56851 147 aa1.14□□□□□ -2.23
TSPAN8-205ENST00000550818 NDUFA4L2Q9NRX3 87 aa1.14□□□□□ -2.23
TSPAN8-205ENST00000550818 MRPL36Q9P0J6 103 aaKnown RBP1.14□□□□□ -2.23
TSPAN8-205ENST00000550818 V9GYH0 126 aa1.14□□□□□ -2.23
TSPAN8-205ENST00000550818 TOP2BQ02880 1626 aa1.14□□□□□ -2.23
TSPAN8-205ENST00000550818 KMT2BQ9UMN6 2715 aaPredicted RBP1.14□□□□□ -2.23
TSPAN8-205ENST00000550818 NCOA6Q14686 2063 aaPredicted RBP1.14□□□□□ -2.23
TSPAN8-205ENST00000550818 GLI2P10070 1586 aa1.13□□□□□ -2.23
TSPAN8-205ENST00000550818 TNRC6BQ9UPQ9 1833 aaKnown RBP1.13□□□□□ -2.23
TSPAN8-205ENST00000550818 ARFGEF1Q9Y6D6 1849 aa1.13□□□□□ -2.23
TSPAN8-205ENST00000550818 TRBV6-7A0A0A0MS04 114 aa1.13□□□□□ -2.23
TSPAN8-205ENST00000550818 IQCF6A8MYZ5 107 aa1.13□□□□□ -2.23
TSPAN8-205ENST00000550818 C10orf142B7Z368 130 aa1.13□□□□□ -2.23
TSPAN8-205ENST00000550818 SMIM5Q71RC9 77 aa1.13□□□□□ -2.23
TSPAN8-205ENST00000550818 NHSQ6T4R5 1651 aa1.13□□□□□ -2.23
TSPAN8-205ENST00000550818 CTTNBP2Q8WZ74 1663 aa1.13□□□□□ -2.23
TSPAN8-205ENST00000550818 ADGRB2O60241 1585 aa1.13□□□□□ -2.23
TSPAN8-205ENST00000550818 ARHGEF5Q12774 1597 aa1.13□□□□□ -2.23
TSPAN8-205ENST00000550818 CDC42BPGQ6DT37 1551 aa1.13□□□□□ -2.23
TSPAN8-205ENST00000550818 NKTRP30414 1462 aaKnown RBP1.12□□□□□ -2.23
TSPAN8-205ENST00000550818 PRXQ9BXM0 1461 aa1.12□□□□□ -2.23
TSPAN8-205ENST00000550818 FLG2Q5D862 2391 aaPredicted RBP1.12□□□□□ -2.23
TSPAN8-205ENST00000550818 LOC285556D6RIA3 1793 aa1.12□□□□□ -2.23
TSPAN8-205ENST00000550818 TOP2AP11388 1531 aaKnown RBP1.12□□□□□ -2.23
TSPAN8-205ENST00000550818 A0A1B0GWA3 101 aa1.12□□□□□ -2.23
TSPAN8-205ENST00000550818 TRBV6-4A0A1B0GX49 114 aa1.12□□□□□ -2.23
TSPAN8-205ENST00000550818 ZNF815PA8K554 130 aa1.12□□□□□ -2.23
TSPAN8-205ENST00000550818 CEBPZOSA8MTT3 80 aa1.12□□□□□ -2.23
TSPAN8-205ENST00000550818 F8WEM9 126 aa1.12□□□□□ -2.23
TSPAN8-205ENST00000550818 FXYD1O00168 92 aa1.12□□□□□ -2.23
TSPAN8-205ENST00000550818 HMGN4O00479 90 aa1.12□□□□□ -2.23
TSPAN8-205ENST00000550818 CCL3L1P16619 93 aa1.12□□□□□ -2.23
TSPAN8-205ENST00000550818 SSBP1Q04837 148 aaKnown RBP1.12□□□□□ -2.23
TSPAN8-205ENST00000550818 PLGLAQ15195 96 aa1.12□□□□□ -2.23
TSPAN8-205ENST00000550818 FAM74A4Q5TZK3 123 aa1.12□□□□□ -2.23
TSPAN8-205ENST00000550818 ATP5EP2Q5VTU8 51 aa1.12□□□□□ -2.23
TSPAN8-205ENST00000550818 Q6JHZ5 121 aa1.12□□□□□ -2.23
TSPAN8-205ENST00000550818 C20orf197Q8N268 126 aa1.12□□□□□ -2.23
TSPAN8-205ENST00000550818 LINC00846Q9NV44 126 aa1.12□□□□□ -2.23
TSPAN8-205ENST00000550818 UBE2D4Q9Y2X8 147 aa1.12□□□□□ -2.23
TSPAN8-205ENST00000550818 MROH2AA6NES4 1674 aa1.12□□□□□ -2.23
TSPAN8-205ENST00000550818 RREB1Q92766 1687 aa1.12□□□□□ -2.23
TSPAN8-205ENST00000550818 ALS2Q96Q42 1657 aa1.12□□□□□ -2.23
TSPAN8-205ENST00000550818 UGGT1Q9NYU2 1555 aa1.12□□□□□ -2.23
TSPAN8-205ENST00000550818 CICQ96RK0 1608 aaPredicted RBP1.11□□□□□ -2.23
TSPAN8-205ENST00000550818 ALKQ9UM73 1620 aa1.11□□□□□ -2.23
TSPAN8-205ENST00000550818 COL14A1Q05707 1796 aaKnown RBP1.11□□□□□ -2.23
TSPAN8-205ENST00000550818 SHPRHQ149N8 1683 aa1.11□□□□□ -2.23
TSPAN8-205ENST00000550818 PREX1Q8TCU6 1659 aa1.11□□□□□ -2.23
TSPAN8-205ENST00000550818 A0A0D9SFI3 127 aa1.11□□□□□ -2.23
TSPAN8-205ENST00000550818 FAM223BA6NKX1 122 aa1.11□□□□□ -2.23
TSPAN8-205ENST00000550818 M0R2N4 97 aa1.11□□□□□ -2.23
TSPAN8-205ENST00000550818 IGLV3-1P01715 115 aa1.11□□□□□ -2.23
TSPAN8-205ENST00000550818 ARMS2P0C7Q2 107 aa1.11□□□□□ -2.23
TSPAN8-205ENST00000550818 C3orf79P0CE67 100 aa1.11□□□□□ -2.23
TSPAN8-205ENST00000550818 HMGA1P17096 107 aaKnown RBP1.11□□□□□ -2.23
TSPAN8-205ENST00000550818 GCHFRP30047 84 aa1.11□□□□□ -2.23
TSPAN8-205ENST00000550818 C6orf201Q7Z4U5 140 aa1.11□□□□□ -2.23
TSPAN8-205ENST00000550818 PPP1R1CQ8WVI7 109 aa1.11□□□□□ -2.23
TSPAN8-205ENST00000550818 OBSCN-AS1Q96MR7 158 aa1.11□□□□□ -2.23
TSPAN8-205ENST00000550818 PSENENQ9NZ42 101 aa1.11□□□□□ -2.23
TSPAN8-205ENST00000550818 PLAC8Q9NZF1 115 aa1.11□□□□□ -2.23
TSPAN8-205ENST00000550818 LINC01558Q9Y6Z2 57 aa1.11□□□□□ -2.23
TSPAN8-205ENST00000550818 LAMC1P11047 1609 aa1.11□□□□□ -2.23
TSPAN8-205ENST00000550818 USP32Q8NFA0 1604 aa1.11□□□□□ -2.23
TSPAN8-205ENST00000550818 CACNA1CQ13936 2221 aa1.11□□□□□ -2.23
TSPAN8-205ENST00000550818 MED13LQ71F56 2210 aa1.11□□□□□ -2.23
TSPAN8-205ENST00000550818 UBR3Q6ZT12 1888 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms