RNA–Protein interactions for RNA: ENST00000550662.1

NPAS3-208, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-208ENST00000550662 NAP1L6A6NFF2 107 aa0.03□□□□□ -2.4
NPAS3-208ENST00000550662 H3BQ15 152 aa0.03□□□□□ -2.4
NPAS3-208ENST00000550662 IGLC1P0CG04 106 aa0.03□□□□□ -2.4
NPAS3-208ENST00000550662 TMEM263Q8WUH6 116 aaKnown RBP0.03□□□□□ -2.4
NPAS3-208ENST00000550662 MUC2Q02817 5179 aa0.02□□□□□ -2.41
NPAS3-208ENST00000550662 USF3Q68DE3 2245 aa0.02□□□□□ -2.41
NPAS3-208ENST00000550662 KMT2AQ03164 3969 aa0.02□□□□□ -2.41
NPAS3-208ENST00000550662 SPRR4Q96PI1 79 aa0.02□□□□□ -2.41
NPAS3-208ENST00000550662 GOLGA4Q13439 2230 aaKnown RBP0.02□□□□□ -2.41
NPAS3-208ENST00000550662 COX6CP09669 75 aa0.01□□□□□ -2.41
NPAS3-208ENST00000550662 Q0VG73 95 aa0.01□□□□□ -2.41
NPAS3-208ENST00000550662 MANBALQ9NQG1 85 aa0.01□□□□□ -2.41
NPAS3-208ENST00000550662 ARL2-SNX15V9GYD0 113 aa0.01□□□□□ -2.41
NPAS3-208ENST00000550662 HMGXB3Q12766 1538 aa0.01□□□□□ -2.41
NPAS3-208ENST00000550662 PAPPAQ13219 1627 aa0.01□□□□□ -2.41
NPAS3-208ENST00000550662 TET3O43151 1660 aa0.01□□□□□ -2.41
NPAS3-208ENST00000550662 KDM5AP29375 1690 aaKnown RBP0.01□□□□□ -2.41
NPAS3-208ENST00000550662 FAT2Q9NYQ8 4349 aa0.01□□□□□ -2.41
NPAS3-208ENST00000550662 CACNA1AO00555 2505 aa0.01□□□□□ -2.41
NPAS3-208ENST00000550662 UBE2D3P61077 147 aa0□□□□□ -2.41
NPAS3-208ENST00000550662 UBE2D2P62837 147 aa0□□□□□ -2.41
NPAS3-208ENST00000550662 FAM223AQ8IWN6 122 aa0□□□□□ -2.41
NPAS3-208ENST00000550662 EHBP1L1Q8N3D4 1523 aa0□□□□□ -2.41
NPAS3-208ENST00000550662 HMCN2Q8NDA2 5059 aa0□□□□□ -2.41
NPAS3-208ENST00000550662 SPTBN1Q01082 2364 aaKnown RBP-0.01□□□□□ -2.41
NPAS3-208ENST00000550662 SPRR1AP35321 89 aa-0.01□□□□□ -2.41
NPAS3-208ENST00000550662 GTF2H5Q6ZYL4 71 aa-0.01□□□□□ -2.41
NPAS3-208ENST00000550662 MYCBP2O75592 4640 aa-0.01□□□□□ -2.41
NPAS3-208ENST00000550662 LPAP08519 4548 aa-0.01□□□□□ -2.41
NPAS3-208ENST00000550662 ARHGAP5Q13017 1502 aa-0.02□□□□□ -2.41
NPAS3-208ENST00000550662 NSD3Q9BZ95 1437 aa-0.02□□□□□ -2.41
NPAS3-208ENST00000550662 FXYD6-FXYD2A0A087WZ82 144 aa-0.02□□□□□ -2.41
NPAS3-208ENST00000550662 PRO1854Q9UHT4 67 aa-0.02□□□□□ -2.41
NPAS3-208ENST00000550662 BTAF1O14981 1849 aa-0.02□□□□□ -2.41
NPAS3-208ENST00000550662 DIP2CQ9Y2E4 1556 aa-0.02□□□□□ -2.41
NPAS3-208ENST00000550662 NCOA3Q9Y6Q9 1424 aa-0.03□□□□□ -2.41
NPAS3-208ENST00000550662 ARHGEF12Q9NZN5 1544 aa-0.03□□□□□ -2.41
NPAS3-208ENST00000550662 PCLOQ9Y6V0 5065 aa-0.04□□□□□ -2.42
NPAS3-208ENST00000550662 ALMS1Q8TCU4 4167 aa-0.04□□□□□ -2.42
NPAS3-208ENST00000550662 TRAPPC2P0DI81 140 aa-0.04□□□□□ -2.42
NPAS3-208ENST00000550662 TRAPPC2BP0DI82 140 aa-0.04□□□□□ -2.42
NPAS3-208ENST00000550662 UBA52P62987 128 aaKnown RBP-0.04□□□□□ -2.42
NPAS3-208ENST00000550662 HECTD4Q9Y4D8 3996 aa-0.04□□□□□ -2.42
NPAS3-208ENST00000550662 HSPG2P98160 4391 aa-0.05□□□□□ -2.42
NPAS3-208ENST00000550662 FLNCQ14315 2725 aa-0.05□□□□□ -2.42
NPAS3-208ENST00000550662 C10orf113Q5VZT2 155 aa-0.05□□□□□ -2.42
NPAS3-208ENST00000550662 SPHKAPQ2M3C7 1700 aa-0.05□□□□□ -2.42
NPAS3-208ENST00000550662 BSNQ9UPA5 3926 aa-0.05□□□□□ -2.42
NPAS3-208ENST00000550662 KMT2CQ8NEZ4 4911 aaKnown RBP-0.05□□□□□ -2.42
NPAS3-208ENST00000550662 NSD1Q96L73 2696 aaPredicted RBP-0.06□□□□□ -2.42
NPAS3-208ENST00000550662 LRP2P98164 4655 aa-0.06□□□□□ -2.42
NPAS3-208ENST00000550662 KRTDAPP60985 99 aa-0.06□□□□□ -2.42
NPAS3-208ENST00000550662 POLA1P09884 1462 aaPredicted RBP-0.06□□□□□ -2.42
NPAS3-208ENST00000550662 TNXBP22105 4242 aa-0.06□□□□□ -2.42
NPAS3-208ENST00000550662 CHD6Q8TD26 2715 aa-0.07□□□□□ -2.42
NPAS3-208ENST00000550662 PRKDCP78527 4128 aaKnown RBP-0.07□□□□□ -2.42
NPAS3-208ENST00000550662 C20orf202A1L168 122 aa-0.07□□□□□ -2.42
NPAS3-208ENST00000550662 C12orf57Q99622 126 aa-0.07□□□□□ -2.42
NPAS3-208ENST00000550662 RYR1P21817 5038 aa-0.08□□□□□ -2.42
NPAS3-208ENST00000550662 MAGI1Q96QZ7 1491 aaPredicted RBP-0.08□□□□□ -2.42
NPAS3-208ENST00000550662 UBR4Q5T4S7 5183 aa-0.08□□□□□ -2.42
NPAS3-208ENST00000550662 DEFB123Q8N688 67 aa-0.08□□□□□ -2.42
NPAS3-208ENST00000550662 TENM4Q6N022 2769 aa-0.08□□□□□ -2.42
NPAS3-208ENST00000550662 RYR2Q92736 4967 aa-0.08□□□□□ -2.42
NPAS3-208ENST00000550662 MRC2Q9UBG0 1479 aa-0.09□□□□□ -2.42
NPAS3-208ENST00000550662 USH2AO75445 5202 aa-0.09□□□□□ -2.42
NPAS3-208ENST00000550662 TMEM262E9PQX1 116 aa-0.09□□□□□ -2.42
NPAS3-208ENST00000550662 COX6B1P14854 86 aa-0.09□□□□□ -2.42
NPAS3-208ENST00000550662 HSD52Q0P140 79 aa-0.09□□□□□ -2.42
NPAS3-208ENST00000550662 PRO1933Q9H354 126 aa-0.09□□□□□ -2.42
NPAS3-208ENST00000550662 KIAA1109Q2LD37 5005 aa-0.09□□□□□ -2.42
NPAS3-208ENST00000550662 PIEZO2Q9H5I5 2752 aa-0.09□□□□□ -2.42
NPAS3-208ENST00000550662 GVINP1Q7Z2Y8 2422 aa-0.09□□□□□ -2.42
NPAS3-208ENST00000550662 RNF213Q63HN8 5207 aa-0.1□□□□□ -2.42
NPAS3-208ENST00000550662 RYR3Q15413 4870 aa-0.1□□□□□ -2.42
NPAS3-208ENST00000550662 ZFHX3Q15911 3703 aa-0.1□□□□□ -2.43
NPAS3-208ENST00000550662 CRYM-AS1A6NIL9 109 aa-0.1□□□□□ -2.43
NPAS3-208ENST00000550662 SNCAP37840 140 aa-0.1□□□□□ -2.43
NPAS3-208ENST00000550662 A0A1B0GWA3 101 aa-0.11□□□□□ -2.43
NPAS3-208ENST00000550662 VWFP04275 2813 aa-0.11□□□□□ -2.43
NPAS3-208ENST00000550662 TOP2BQ02880 1626 aa-0.12□□□□□ -2.43
NPAS3-208ENST00000550662 EPPK1P58107 5090 aaKnown RBP-0.12□□□□□ -2.43
NPAS3-208ENST00000550662 LRP1BQ9NZR2 4599 aa-0.12□□□□□ -2.43
NPAS3-208ENST00000550662 TRBV7-4A0A0J9YYF1 115 aa-0.12□□□□□ -2.43
NPAS3-208ENST00000550662 SAA2P0DJI9 122 aaPredicted RBP-0.12□□□□□ -2.43
NPAS3-208ENST00000550662 SFTA2Q6UW10 78 aa-0.12□□□□□ -2.43
NPAS3-208ENST00000550662 ADGRL2O95490 1459 aa-0.12□□□□□ -2.43
NPAS3-208ENST00000550662 FLNAP21333 2647 aaKnown RBP-0.12□□□□□ -2.43
NPAS3-208ENST00000550662 TULP4Q9NRJ4 1543 aa-0.13□□□□□ -2.43
NPAS3-208ENST00000550662 ABCA13Q86UQ4 5058 aa-0.13□□□□□ -2.43
NPAS3-208ENST00000550662 PKD1L1Q8TDX9 2849 aa-0.13□□□□□ -2.43
NPAS3-208ENST00000550662 STAB1Q9NY15 2570 aa-0.13□□□□□ -2.43
NPAS3-208ENST00000550662 GAPVD1Q14C86 1478 aa-0.13□□□□□ -2.43
NPAS3-208ENST00000550662 HYDINQ4G0P3 5121 aa-0.14□□□□□ -2.43
NPAS3-208ENST00000550662 FAM223BA6NKX1 122 aa-0.14□□□□□ -2.43
NPAS3-208ENST00000550662 S100PP25815 95 aa-0.14□□□□□ -2.43
NPAS3-208ENST00000550662 CC2D2AQ9P2K1 1620 aa-0.14□□□□□ -2.43
NPAS3-208ENST00000550662 DCHS2Q6V1P9 2916 aa-0.15□□□□□ -2.43
NPAS3-208ENST00000550662 FDCSPQ8NFU4 85 aa-0.15□□□□□ -2.43
NPAS3-208ENST00000550662 LINC01600Q96MT4 127 aa-0.15□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms