RNA–Protein interactions for RNA: ENST00000548365.5

TGFBR1-205, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 3

Gene TGFBR1, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-205ENST00000548365 DEFB131AP59861 70 aa3.55□□□□□ -1.84
TGFBR1-205ENST00000548365 RPL18AQ02543 176 aaKnown RBP3.55□□□□□ -1.84
TGFBR1-205ENST00000548365 COX17Q14061 63 aa3.55□□□□□ -1.84
TGFBR1-205ENST00000548365 RBMY1FQ15415 496 aaKnown RBP3.55□□□□□ -1.84
TGFBR1-205ENST00000548365 SMIM20Q8N5G0 67 aa3.55□□□□□ -1.84
TGFBR1-205ENST00000548365 CLEC2BQ92478 149 aa3.55□□□□□ -1.84
TGFBR1-205ENST00000548365 TMEM243Q9BU79 118 aa3.55□□□□□ -1.84
TGFBR1-205ENST00000548365 BEX4Q9NWD9 120 aaPredicted RBP3.55□□□□□ -1.84
TGFBR1-205ENST00000548365 KLK5Q9Y337 293 aaPredicted RBP3.55□□□□□ -1.84
TGFBR1-205ENST00000548365 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.55□□□□□ -1.84
TGFBR1-205ENST00000548365 LOC400499M0QZD8 3231 aa3.55□□□□□ -1.84
TGFBR1-205ENST00000548365 DOPEY2Q9Y3R5 2298 aa3.54□□□□□ -1.84
TGFBR1-205ENST00000548365 IGKV3-7A0A075B6H7 116 aa3.54□□□□□ -1.84
TGFBR1-205ENST00000548365 IGHV3-64A0A075B6Q5 118 aa3.54□□□□□ -1.84
TGFBR1-205ENST00000548365 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.54□□□□□ -1.84
TGFBR1-205ENST00000548365 IGHV4-30-2A0A087WSY4 118 aa3.54□□□□□ -1.84
TGFBR1-205ENST00000548365 A0A087WZ39 114 aa3.54□□□□□ -1.84
TGFBR1-205ENST00000548365 IGKV2-29A2NJV5 120 aaPredicted RBP3.54□□□□□ -1.84
TGFBR1-205ENST00000548365 UBE2L6O14933 153 aa3.54□□□□□ -1.84
TGFBR1-205ENST00000548365 TGFAP01135 160 aa3.54□□□□□ -1.84
TGFBR1-205ENST00000548365 LINC00694P0DN24 101 aa3.54□□□□□ -1.84
TGFBR1-205ENST00000548365 PDE6GP18545 87 aa3.54□□□□□ -1.84
TGFBR1-205ENST00000548365 C9orf153Q5TBE3 101 aa3.54□□□□□ -1.84
TGFBR1-205ENST00000548365 COX7B2Q8TF08 81 aa3.54□□□□□ -1.84
TGFBR1-205ENST00000548365 DYNLRB2Q8TF09 96 aa3.54□□□□□ -1.84
TGFBR1-205ENST00000548365 NRGNQ92686 78 aa3.54□□□□□ -1.84
TGFBR1-205ENST00000548365 WDFY4Q6ZS81 3184 aa3.54□□□□□ -1.84
TGFBR1-205ENST00000548365 HRNRQ86YZ3 2850 aaPredicted RBP3.53□□□□□ -1.84
TGFBR1-205ENST00000548365 COL6A3P12111 3177 aa3.53□□□□□ -1.84
TGFBR1-205ENST00000548365 GVINP1Q7Z2Y8 2422 aa3.53□□□□□ -1.84
TGFBR1-205ENST00000548365 A0A1B0GUV1 79 aa3.53□□□□□ -1.84
TGFBR1-205ENST00000548365 hADV29S1A0JD25 119 aa3.53□□□□□ -1.84
TGFBR1-205ENST00000548365 GNLYP22749 145 aa3.53□□□□□ -1.84
TGFBR1-205ENST00000548365 DEFB114Q30KQ6 69 aa3.53□□□□□ -1.84
TGFBR1-205ENST00000548365 DEFB112Q30KQ8 113 aa3.53□□□□□ -1.84
TGFBR1-205ENST00000548365 LYPD5Q6UWN5 251 aa3.53□□□□□ -1.84
TGFBR1-205ENST00000548365 SOSTDC1Q6X4U4 206 aa3.53□□□□□ -1.84
TGFBR1-205ENST00000548365 STHQ8IWL8 128 aa3.53□□□□□ -1.84
TGFBR1-205ENST00000548365 Q8IZM0 81 aa3.53□□□□□ -1.84
TGFBR1-205ENST00000548365 SERP2Q8N6R1 65 aa3.53□□□□□ -1.84
TGFBR1-205ENST00000548365 SND1-IT1Q9HBX3 110 aa3.53□□□□□ -1.84
TGFBR1-205ENST00000548365 CFAP47Q6ZTR5 3102 aa3.53□□□□□ -1.85
TGFBR1-205ENST00000548365 IGHV3OR16-9A0A0B4J2B5 98 aa3.52□□□□□ -1.85
TGFBR1-205ENST00000548365 IGHV4-28A0A0C4DH34 117 aa3.52□□□□□ -1.85
TGFBR1-205ENST00000548365 TMEM256-PLSCR3K7ERE1 68 aa3.52□□□□□ -1.85
TGFBR1-205ENST00000548365 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.52□□□□□ -1.85
TGFBR1-205ENST00000548365 OR13C6PQ8NH95 151 aa3.52□□□□□ -1.85
TGFBR1-205ENST00000548365 KIR2DL5BQ8NHK3 375 aa3.52□□□□□ -1.85
TGFBR1-205ENST00000548365 ORMDL1Q9P0S3 153 aa3.52□□□□□ -1.85
TGFBR1-205ENST00000548365 C22orf24Q9Y442 160 aa3.52□□□□□ -1.85
TGFBR1-205ENST00000548365 SMG1Q96Q15 3661 aaKnown RBP3.52□□□□□ -1.85
TGFBR1-205ENST00000548365 ADGRG4Q8IZF6 3080 aa3.52□□□□□ -1.85
TGFBR1-205ENST00000548365 MUC3AQ02505 3323 aa3.51□□□□□ -1.85
TGFBR1-205ENST00000548365 HIVEP3Q5T1R4 2406 aa3.51□□□□□ -1.85
TGFBR1-205ENST00000548365 LOC100131303A0A0U1RQF7 123 aa3.51□□□□□ -1.85
TGFBR1-205ENST00000548365 KNCNA6PVL3 124 aa3.51□□□□□ -1.85
TGFBR1-205ENST00000548365 C19orf84I3L1E1 186 aa3.51□□□□□ -1.85
TGFBR1-205ENST00000548365 IGKV3-20P01619 116 aa3.51□□□□□ -1.85
TGFBR1-205ENST00000548365 CCKP06307 115 aa3.51□□□□□ -1.85
TGFBR1-205ENST00000548365 EDN2P20800 178 aa3.51□□□□□ -1.85
TGFBR1-205ENST00000548365 COX6A2Q02221 97 aa3.51□□□□□ -1.85
TGFBR1-205ENST00000548365 CEMP1Q6PRD7 247 aaPredicted RBP3.51□□□□□ -1.85
TGFBR1-205ENST00000548365 LINC00337Q8N6G1 96 aa3.51□□□□□ -1.85
TGFBR1-205ENST00000548365 LINC00612Q8N6U2 182 aa3.51□□□□□ -1.85
TGFBR1-205ENST00000548365 SMCR5Q8TEV8 140 aa3.51□□□□□ -1.85
TGFBR1-205ENST00000548365 C2orf48Q96LS8 159 aa3.51□□□□□ -1.85
TGFBR1-205ENST00000548365 CHCHD5Q9BSY4 110 aa3.51□□□□□ -1.85
TGFBR1-205ENST00000548365 TTC28Q96AY4 2481 aa3.51□□□□□ -1.85
TGFBR1-205ENST00000548365 COL6A6A6NMZ7 2263 aa3.5□□□□□ -1.85
TGFBR1-205ENST00000548365 KALRNO60229 2985 aa3.5□□□□□ -1.85
TGFBR1-205ENST00000548365 IGKV2-28A0A075B6P5 120 aa3.5□□□□□ -1.85
TGFBR1-205ENST00000548365 TRGV1A0A0A0MS02 117 aa3.5□□□□□ -1.85
TGFBR1-205ENST00000548365 TRBV6-8A0A0A6YYG3 113 aa3.5□□□□□ -1.85
TGFBR1-205ENST00000548365 IGKV2D-28P01615 120 aa3.5□□□□□ -1.85
TGFBR1-205ENST00000548365 ATP5EP56381 51 aaPredicted RBP3.5□□□□□ -1.85
TGFBR1-205ENST00000548365 C5orf47Q569G3 176 aa3.5□□□□□ -1.85
TGFBR1-205ENST00000548365 GAGE2AQ6NT46 116 aa3.5□□□□□ -1.85
TGFBR1-205ENST00000548365 NTM-AS1Q6ZSK4 140 aa3.5□□□□□ -1.85
TGFBR1-205ENST00000548365 C1orf158Q8N1D5 194 aa3.5□□□□□ -1.85
TGFBR1-205ENST00000548365 MIR7-3HGQ8N6C7 128 aa3.5□□□□□ -1.85
TGFBR1-205ENST00000548365 AKAP13Q12802 2813 aa3.5□□□□□ -1.85
TGFBR1-205ENST00000548365 SPTA1P02549 2419 aa3.5□□□□□ -1.85
TGFBR1-205ENST00000548365 LOC110117498A0A087WWA1 95 aa3.49□□□□□ -1.85
TGFBR1-205ENST00000548365 IGHV3-73A0A0B4J1V6 119 aa3.49□□□□□ -1.85
TGFBR1-205ENST00000548365 TRAV13-1A0A0B4J241 112 aa3.49□□□□□ -1.85
TGFBR1-205ENST00000548365 LOC107984640A0A0U1RRK4 108 aa3.49□□□□□ -1.85
TGFBR1-205ENST00000548365 A0A1B0GW54 56 aa3.49□□□□□ -1.85
TGFBR1-205ENST00000548365 SMIM9A6NGZ8 99 aa3.49□□□□□ -1.85
TGFBR1-205ENST00000548365 A8MZ25 164 aa3.49□□□□□ -1.85
TGFBR1-205ENST00000548365 CCL18P55774 89 aa3.49□□□□□ -1.85
TGFBR1-205ENST00000548365 RNASE13Q5GAN3 156 aaKnown RBP3.49□□□□□ -1.85
TGFBR1-205ENST00000548365 SMIM11BQ8TCY0 68 aa3.49□□□□□ -1.85
TGFBR1-205ENST00000548365 FAM218AQ96MZ4 157 aa3.49□□□□□ -1.85
TGFBR1-205ENST00000548365 MED13LQ71F56 2210 aa3.49□□□□□ -1.85
TGFBR1-205ENST00000548365 SPTBN1Q01082 2364 aaKnown RBP3.49□□□□□ -1.85
TGFBR1-205ENST00000548365 MGAQ8IWI9 3026 aa3.49□□□□□ -1.85
TGFBR1-205ENST00000548365 IGHV3-38A0A0C4DH36 116 aa3.48□□□□□ -1.85
TGFBR1-205ENST00000548365 TRBV7-6A0A0J9YX20 115 aa3.48□□□□□ -1.85
TGFBR1-205ENST00000548365 USP17L23D6RBM5 183 aa3.48□□□□□ -1.85
TGFBR1-205ENST00000548365 NDUFC1O43677 76 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms