RNA–Protein interactions for RNA: ENST00000548365.5

TGFBR1-205, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 3

Gene TGFBR1, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-205ENST00000548365 AEBP2Q6ZN18 517 aaPredicted RBP20.79■□□□□ 0.92
TGFBR1-205ENST00000548365 CHIC1Q5VXU3 224 aa20.03■□□□□ 0.8
TGFBR1-205ENST00000548365 PHF23Q9BUL5 403 aaPredicted RBP17.72■□□□□ 0.43
TGFBR1-205ENST00000548365 SENP3Q9H4L4 574 aaPredicted RBP17.45■□□□□ 0.38
TGFBR1-205ENST00000548365 FOXD1Q16676 465 aa16.35■□□□□ 0.21
TGFBR1-205ENST00000548365 PLPPR3Q6T4P5 718 aa16.09■□□□□ 0.17
TGFBR1-205ENST00000548365 PPP6R1Q9UPN7 881 aa15.69■□□□□ 0.1
TGFBR1-205ENST00000548365 ADRA2BP18089 450 aa15.61■□□□□ 0.09
TGFBR1-205ENST00000548365 PIAS4Q8N2W9 510 aaPredicted RBP15.28■□□□□ 0.04
TGFBR1-205ENST00000548365 MSH5O43196 834 aa14.97□□□□□ -0.01
TGFBR1-205ENST00000548365 POTEDQ86YR6 584 aa14.43□□□□□ -0.1
TGFBR1-205ENST00000548365 MAPK8IP2Q13387 824 aaPredicted RBP14.25□□□□□ -0.13
TGFBR1-205ENST00000548365 PPP4R3CPQ6ZMV5 832 aa14.23□□□□□ -0.13
TGFBR1-205ENST00000548365 SCAF1Q9H7N4 1312 aaKnown RBP14.04□□□□□ -0.16
TGFBR1-205ENST00000548365 DMRT2Q9Y5R5 561 aa13.98□□□□□ -0.17
TGFBR1-205ENST00000548365 CNKSR2Q8WXI2 1034 aa13.81□□□□□ -0.2
TGFBR1-205ENST00000548365 KCNA4P22459 653 aa13.8□□□□□ -0.2
TGFBR1-205ENST00000548365 NCBP3Q53F19 620 aaKnown RBP13.66□□□□□ -0.22
TGFBR1-205ENST00000548365 NPM3O75607 178 aaKnown RBP13.65□□□□□ -0.22
TGFBR1-205ENST00000548365 HOXD11P31277 338 aaPredicted RBP13.64□□□□□ -0.23
TGFBR1-205ENST00000548365 RNF216Q9NWF9 866 aaPredicted RBP13.6□□□□□ -0.23
TGFBR1-205ENST00000548365 DCAF8L1A6NGE4 600 aa13.27□□□□□ -0.29
TGFBR1-205ENST00000548365 DNAJC5BQ9UF47 199 aa13.26□□□□□ -0.29
TGFBR1-205ENST00000548365 SLC4A2P04920 1241 aa13□□□□□ -0.33
TGFBR1-205ENST00000548365 SLC4A1APQ9BWU0 796 aaKnown RBP13□□□□□ -0.33
TGFBR1-205ENST00000548365 RNF39Q9H2S5 420 aa12.93□□□□□ -0.34
TGFBR1-205ENST00000548365 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.88□□□□□ -0.35
TGFBR1-205ENST00000548365 U3KPZ7 1027 aaPredicted RBP12.8□□□□□ -0.36
TGFBR1-205ENST00000548365 ZBTB22O15209 634 aa12.78□□□□□ -0.36
TGFBR1-205ENST00000548365 CACNB1Q02641 598 aaPredicted RBP12.73□□□□□ -0.37
TGFBR1-205ENST00000548365 C1QBPQ07021 282 aaKnown RBP12.67□□□□□ -0.38
TGFBR1-205ENST00000548365 FOXD4L1Q9NU39 408 aa12.63□□□□□ -0.39
TGFBR1-205ENST00000548365 MYCNP04198 464 aaPredicted RBP12.51□□□□□ -0.41
TGFBR1-205ENST00000548365 CSRNP3Q8WYN3 585 aa12.51□□□□□ -0.41
TGFBR1-205ENST00000548365 SPINK5Q9NQ38 1064 aaPredicted RBP12.5□□□□□ -0.41
TGFBR1-205ENST00000548365 EHMT2Q96KQ7 1210 aa12.48□□□□□ -0.41
TGFBR1-205ENST00000548365 ATF5Q9Y2D1 282 aaPredicted RBP12.38□□□□□ -0.43
TGFBR1-205ENST00000548365 SAMD1Q6SPF0 538 aaPredicted RBP12.36□□□□□ -0.43
TGFBR1-205ENST00000548365 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.35□□□□□ -0.43
TGFBR1-205ENST00000548365 HNRNPUL2Q1KMD3 747 aaKnown RBP12.35□□□□□ -0.43
TGFBR1-205ENST00000548365 CAPN15O75808 1086 aa12.32□□□□□ -0.44
TGFBR1-205ENST00000548365 DSG3P32926 999 aa12.26□□□□□ -0.45
TGFBR1-205ENST00000548365 TRHP20396 242 aaPredicted RBP12.25□□□□□ -0.45
TGFBR1-205ENST00000548365 APLP2Q06481 763 aa12.2□□□□□ -0.46
TGFBR1-205ENST00000548365 ATXN8OSP0DMR3 200 aa12.17□□□□□ -0.46
TGFBR1-205ENST00000548365 ZNF219Q9P2Y4 722 aaPredicted RBP12.17□□□□□ -0.46
TGFBR1-205ENST00000548365 ABCB7O75027 752 aa12.15□□□□□ -0.46
TGFBR1-205ENST00000548365 POLA2Q14181 598 aa12.05□□□□□ -0.48
TGFBR1-205ENST00000548365 MKRN4PQ13434 485 aaPredicted RBP11.82□□□□□ -0.52
TGFBR1-205ENST00000548365 ZBTB12Q9Y330 459 aaPredicted RBP11.69□□□□□ -0.54
TGFBR1-205ENST00000548365 OSCARQ8IYS5 282 aa11.67□□□□□ -0.54
TGFBR1-205ENST00000548365 FBLN2P98095 1184 aa11.6□□□□□ -0.55
TGFBR1-205ENST00000548365 RBM42Q9BTD8 480 aaKnown RBP11.51□□□□□ -0.57
TGFBR1-205ENST00000548365 SPDYE2BA6NHP3 402 aa11.45□□□□□ -0.58
TGFBR1-205ENST00000548365 SPDYE6P0CI01 402 aa11.45□□□□□ -0.58
TGFBR1-205ENST00000548365 SPDYE2Q495Y8 402 aa11.45□□□□□ -0.58
TGFBR1-205ENST00000548365 SSUH2Q9Y2M2 353 aa11.43□□□□□ -0.58
TGFBR1-205ENST00000548365 AKT1S1Q96B36 256 aa11.41□□□□□ -0.58
TGFBR1-205ENST00000548365 ZNF692Q9BU19 519 aaPredicted RBP11.38□□□□□ -0.59
TGFBR1-205ENST00000548365 REM2Q8IYK8 340 aaPredicted RBP11.37□□□□□ -0.59
TGFBR1-205ENST00000548365 SPDYE4A6NLX3 237 aa11.33□□□□□ -0.6
TGFBR1-205ENST00000548365 POTEHQ6S545 545 aa11.31□□□□□ -0.6
TGFBR1-205ENST00000548365 PABPN1Q86U42 306 aaKnown RBP eCLIP11.27□□□□□ -0.61
TGFBR1-205ENST00000548365 PITPNM1O00562 1244 aa11.26□□□□□ -0.61
TGFBR1-205ENST00000548365 PROM2Q8N271 834 aa11.23□□□□□ -0.61
TGFBR1-205ENST00000548365 FKBP8Q14318 412 aa11.22□□□□□ -0.61
TGFBR1-205ENST00000548365 CHRDL2Q6WN34 429 aa11.2□□□□□ -0.62
TGFBR1-205ENST00000548365 SPDYE1Q8NFV5 336 aaPredicted RBP11.12□□□□□ -0.63
TGFBR1-205ENST00000548365 CLEC11AQ9Y240 323 aa11.1□□□□□ -0.63
TGFBR1-205ENST00000548365 FXR2P51116 673 aaKnown RBP eCLIP11.08□□□□□ -0.64
TGFBR1-205ENST00000548365 PIP4P2Q8N4L2 257 aa11.07□□□□□ -0.64
TGFBR1-205ENST00000548365 PRR29P0C7W0 189 aa10.96□□□□□ -0.65
TGFBR1-205ENST00000548365 CHADLQ6NUI6 762 aa10.94□□□□□ -0.66
TGFBR1-205ENST00000548365 STAG3Q9UJ98 1225 aa10.93□□□□□ -0.66
TGFBR1-205ENST00000548365 PRKAR2AP13861 404 aaKnown RBP10.92□□□□□ -0.66
TGFBR1-205ENST00000548365 CREBZFQ9NS37 354 aa10.92□□□□□ -0.66
TGFBR1-205ENST00000548365 MNX1P50219 401 aaPredicted RBP10.84□□□□□ -0.67
TGFBR1-205ENST00000548365 FARP1Q9Y4F1 1045 aaPredicted RBP10.79□□□□□ -0.68
TGFBR1-205ENST00000548365 EVX2Q03828 476 aa10.78□□□□□ -0.68
TGFBR1-205ENST00000548365 FBXO3Q9UK99 471 aa10.73□□□□□ -0.69
TGFBR1-205ENST00000548365 MIER1Q8N108 512 aa10.72□□□□□ -0.69
TGFBR1-205ENST00000548365 C19orf67A6NJJ6 358 aa10.71□□□□□ -0.69
TGFBR1-205ENST00000548365 VASPP50552 380 aaPredicted RBP10.71□□□□□ -0.69
TGFBR1-205ENST00000548365 HAX1O00165 279 aa10.66□□□□□ -0.7
TGFBR1-205ENST00000548365 PLCD3Q8N3E9 789 aa10.65□□□□□ -0.7
TGFBR1-205ENST00000548365 IFNLR1Q8IU57 520 aaPredicted RBP10.63□□□□□ -0.71
TGFBR1-205ENST00000548365 SP7Q8TDD2 431 aaPredicted RBP10.63□□□□□ -0.71
TGFBR1-205ENST00000548365 NUBP1P53384 320 aa10.59□□□□□ -0.71
TGFBR1-205ENST00000548365 CD44P16070 742 aaKnown RBP10.58□□□□□ -0.72
TGFBR1-205ENST00000548365 RASEFQ8IZ41 740 aa10.57□□□□□ -0.72
TGFBR1-205ENST00000548365 NPM1P06748 294 aaKnown RBP eCLIP10.55□□□□□ -0.72
TGFBR1-205ENST00000548365 PLEKHG5O94827 1062 aa10.5□□□□□ -0.73
TGFBR1-205ENST00000548365 ZRANB1Q9UGI0 708 aa10.49□□□□□ -0.73
TGFBR1-205ENST00000548365 TSPYL2Q9H2G4 693 aaPredicted RBP10.48□□□□□ -0.73
TGFBR1-205ENST00000548365 ZNF579Q8NAF0 562 aaKnown RBP10.47□□□□□ -0.73
TGFBR1-205ENST00000548365 PHF12Q96QT6 1004 aa10.47□□□□□ -0.73
TGFBR1-205ENST00000548365 CCDC61Q9Y6R9 512 aa10.47□□□□□ -0.73
TGFBR1-205ENST00000548365 KLHL34Q8N239 644 aa10.46□□□□□ -0.73
TGFBR1-205ENST00000548365 ZBTB47Q9UFB7 747 aaPredicted RBP10.46□□□□□ -0.73
TGFBR1-205ENST00000548365 GABBR2O75899 941 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms