RNA–Protein interactions for RNA: ENST00000547715.1

PTPRB-205, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 2

Gene PTPRB, Length 639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-205ENST00000547715 P01737 135 aa9.31□□□□□ -0.92
PTPRB-205ENST00000547715 CKS1BP61024 79 aa9.31□□□□□ -0.92
PTPRB-205ENST00000547715 RPL24P83731 157 aaKnown RBP9.31□□□□□ -0.92
PTPRB-205ENST00000547715 ZFP2Q6ZN57 461 aa9.31□□□□□ -0.92
PTPRB-205ENST00000547715 TMEM75Q8N9X5 138 aa9.31□□□□□ -0.92
PTPRB-205ENST00000547715 SGK494Q96LW2 274 aa9.31□□□□□ -0.92
PTPRB-205ENST00000547715 DPH3P1Q9H4G8 78 aa9.31□□□□□ -0.92
PTPRB-205ENST00000547715 hDV102S1A0JD36 115 aa9.3□□□□□ -0.92
PTPRB-205ENST00000547715 A8MWV9 139 aa9.3□□□□□ -0.92
PTPRB-205ENST00000547715 PANO1I0J062 215 aa9.3□□□□□ -0.92
PTPRB-205ENST00000547715 RNASE3P12724 160 aaKnown RBP9.3□□□□□ -0.92
PTPRB-205ENST00000547715 ZNF80P51504 273 aaPredicted RBP9.3□□□□□ -0.92
PTPRB-205ENST00000547715 LYRM7Q5U5X0 104 aa9.3□□□□□ -0.92
PTPRB-205ENST00000547715 C14orf178Q8N769 122 aaPredicted RBP9.3□□□□□ -0.92
PTPRB-205ENST00000547715 PTH2Q96A98 100 aa9.3□□□□□ -0.92
PTPRB-205ENST00000547715 USP17L23D6RBM5 183 aa9.29□□□□□ -0.92
PTPRB-205ENST00000547715 H0Y8G0 127 aa9.29□□□□□ -0.92
PTPRB-205ENST00000547715 FGF6P10767 208 aa9.29□□□□□ -0.92
PTPRB-205ENST00000547715 GNG5P63218 68 aa9.29□□□□□ -0.92
PTPRB-205ENST00000547715 C9orf163Q8N9P6 203 aa9.29□□□□□ -0.92
PTPRB-205ENST00000547715 ZC2HC1AQ96GY0 325 aa9.29□□□□□ -0.92
PTPRB-205ENST00000547715 LINC00479Q96M42 142 aa9.29□□□□□ -0.92
PTPRB-205ENST00000547715 CHCHD7Q9BUK0 85 aa9.29□□□□□ -0.92
PTPRB-205ENST00000547715 CYSLTR1Q9Y271 337 aa9.29□□□□□ -0.92
PTPRB-205ENST00000547715 PRSS1P07477 247 aa9.28□□□□□ -0.92
PTPRB-205ENST00000547715 DGAT2L7PQ6IED9 249 aa9.28□□□□□ -0.92
PTPRB-205ENST00000547715 URB1-AS1Q96HZ7 61 aa9.28□□□□□ -0.92
PTPRB-205ENST00000547715 MLST8Q9BVC4 326 aa9.28□□□□□ -0.92
PTPRB-205ENST00000547715 EPDR1Q9UM22 224 aa9.28□□□□□ -0.92
PTPRB-205ENST00000547715 A0A1B0GUT8 65 aa9.27□□□□□ -0.93
PTPRB-205ENST00000547715 C19orf71A6NCJ1 209 aa9.27□□□□□ -0.93
PTPRB-205ENST00000547715 CRPP02741 224 aa9.27□□□□□ -0.93
PTPRB-205ENST00000547715 CAMPP49913 170 aa9.27□□□□□ -0.93
PTPRB-205ENST00000547715 ODF1Q14990 250 aa9.27□□□□□ -0.93
PTPRB-205ENST00000547715 JPT2Q9H910 190 aa9.27□□□□□ -0.93
PTPRB-205ENST00000547715 LTAP01374 205 aa9.26□□□□□ -0.93
PTPRB-205ENST00000547715 ENHOQ6UWT2 76 aa9.26□□□□□ -0.93
PTPRB-205ENST00000547715 PRSS3P2Q8NHM4 247 aa9.26□□□□□ -0.93
PTPRB-205ENST00000547715 GTSF1Q8WW33 167 aa9.26□□□□□ -0.93
PTPRB-205ENST00000547715 SPANXDQ9BXN6 97 aa9.26□□□□□ -0.93
PTPRB-205ENST00000547715 TMEM262E9PQX1 116 aa9.25□□□□□ -0.93
PTPRB-205ENST00000547715 K7EQM0 130 aa9.25□□□□□ -0.93
PTPRB-205ENST00000547715 S100A4P26447 101 aaKnown RBP9.25□□□□□ -0.93
PTPRB-205ENST00000547715 SDIM1Q6ZPB5 146 aa9.25□□□□□ -0.93
PTPRB-205ENST00000547715 SERTM2A0A1B0GWG4 89 aa9.24□□□□□ -0.93
PTPRB-205ENST00000547715 GAS8-AS1O95177 125 aa9.24□□□□□ -0.93
PTPRB-205ENST00000547715 HBDP02042 147 aa9.24□□□□□ -0.93
PTPRB-205ENST00000547715 PIK3CD-AS1Q5SR53 167 aa9.24□□□□□ -0.93
PTPRB-205ENST00000547715 FAM74A4Q5TZK3 123 aa9.24□□□□□ -0.93
PTPRB-205ENST00000547715 DPH3Q96FX2 82 aa9.24□□□□□ -0.93
PTPRB-205ENST00000547715 SPANXB1Q9NS25 103 aaPredicted RBP9.24□□□□□ -0.93
PTPRB-205ENST00000547715 E9PLD3 99 aa9.23□□□□□ -0.93
PTPRB-205ENST00000547715 ANGP03950 147 aaKnown RBP9.23□□□□□ -0.93
PTPRB-205ENST00000547715 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.22□□□□□ -0.93
PTPRB-205ENST00000547715 RHODO00212 210 aa9.22□□□□□ -0.93
PTPRB-205ENST00000547715 ATP5LO75964 103 aa9.22□□□□□ -0.93
PTPRB-205ENST00000547715 SMAGPQ0VAQ4 97 aa9.22□□□□□ -0.93
PTPRB-205ENST00000547715 LINC01600Q96MT4 127 aa9.22□□□□□ -0.93
PTPRB-205ENST00000547715 GEMIN7Q9H840 131 aaKnown RBP9.22□□□□□ -0.93
PTPRB-205ENST00000547715 PSG8Q9UQ74 426 aa9.22□□□□□ -0.93
PTPRB-205ENST00000547715 IGKV3D-20A0A0C4DH25 116 aa9.21□□□□□ -0.94
PTPRB-205ENST00000547715 LINC01546A6NGU7 62 aa9.21□□□□□ -0.94
PTPRB-205ENST00000547715 H3BMG7 143 aa9.21□□□□□ -0.94
PTPRB-205ENST00000547715 TSPAN13O95857 204 aa9.21□□□□□ -0.94
PTPRB-205ENST00000547715 TCRAP04437 139 aa9.21□□□□□ -0.94
PTPRB-205ENST00000547715 CIRBPQ14011 172 aaKnown RBP9.21□□□□□ -0.94
PTPRB-205ENST00000547715 PRNTQ86SH4 94 aa9.21□□□□□ -0.94
PTPRB-205ENST00000547715 A0A087WWL8 130 aa9.2□□□□□ -0.94
PTPRB-205ENST00000547715 A0A087WYN8 130 aa9.2□□□□□ -0.94
PTPRB-205ENST00000547715 RPL36AP83881 106 aaKnown RBP9.2□□□□□ -0.94
PTPRB-205ENST00000547715 MIAQ16674 131 aa9.2□□□□□ -0.94
PTPRB-205ENST00000547715 RPL36ALQ969Q0 106 aaKnown RBP9.2□□□□□ -0.94
PTPRB-205ENST00000547715 TRBV6-8A0A0A6YYG3 113 aa9.19□□□□□ -0.94
PTPRB-205ENST00000547715 H3BVH4 76 aa9.19□□□□□ -0.94
PTPRB-205ENST00000547715 M0QXV9 152 aa9.19□□□□□ -0.94
PTPRB-205ENST00000547715 UBE2D3P61077 147 aa9.19□□□□□ -0.94
PTPRB-205ENST00000547715 UBE2D2P62837 147 aa9.19□□□□□ -0.94
PTPRB-205ENST00000547715 ORMDL3Q8N138 153 aa9.19□□□□□ -0.94
PTPRB-205ENST00000547715 IFI27L1Q96BM0 104 aa9.19□□□□□ -0.94
PTPRB-205ENST00000547715 PGLYRP4Q96LB8 373 aa9.19□□□□□ -0.94
PTPRB-205ENST00000547715 SPANXCQ9NY87 97 aa9.19□□□□□ -0.94
PTPRB-205ENST00000547715 TRBV7-3A0A075B6L6 115 aa9.18□□□□□ -0.94
PTPRB-205ENST00000547715 CHTF8P0CG12 524 aa9.18□□□□□ -0.94
PTPRB-205ENST00000547715 TWIST1Q15672 202 aa9.18□□□□□ -0.94
PTPRB-205ENST00000547715 CLPSL2Q6UWE3 100 aa9.18□□□□□ -0.94
PTPRB-205ENST00000547715 CEND1Q8N111 149 aa9.18□□□□□ -0.94
PTPRB-205ENST00000547715 NXT2Q9NPJ8 142 aaKnown RBP9.18□□□□□ -0.94
PTPRB-205ENST00000547715 TRBV10-1A0A0K0K1A3 114 aa9.17□□□□□ -0.94
PTPRB-205ENST00000547715 A0A1B0GWB2 263 aa9.17□□□□□ -0.94
PTPRB-205ENST00000547715 GAGE6Q13070 117 aa9.17□□□□□ -0.94
PTPRB-205ENST00000547715 LINC00173Q6ZV60 143 aa9.17□□□□□ -0.94
PTPRB-205ENST00000547715 C7orf33Q8WU49 177 aa9.17□□□□□ -0.94
PTPRB-205ENST00000547715 RNF185Q96GF1 192 aa9.17□□□□□ -0.94
PTPRB-205ENST00000547715 CHCHD5Q9BSY4 110 aa9.17□□□□□ -0.94
PTPRB-205ENST00000547715 FABP5P3A8MUU1 101 aa9.16□□□□□ -0.94
PTPRB-205ENST00000547715 ARMS2P0C7Q2 107 aa9.16□□□□□ -0.94
PTPRB-205ENST00000547715 CNBPP62633 177 aaKnown RBP9.16□□□□□ -0.94
PTPRB-205ENST00000547715 Q86TA4 180 aa9.16□□□□□ -0.94
PTPRB-205ENST00000547715 ERG28Q9UKR5 140 aa9.16□□□□□ -0.94
PTPRB-205ENST00000547715 KIF25-AS1Q9Y6Z4 181 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms