RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 LINC00612Q8N6U2 182 aa12.08□□□□□ -0.48
RBFOX1-207ENST00000547338 GEMIN7Q9H840 131 aaKnown RBP12.08□□□□□ -0.48
RBFOX1-207ENST00000547338 VPS13DQ5THJ4 4388 aa12.08□□□□□ -0.48
RBFOX1-207ENST00000547338 TSPEAR-AS2P59090 65 aa12.07□□□□□ -0.48
RBFOX1-207ENST00000547338 LINC00476Q8WZB0 136 aa12.07□□□□□ -0.48
RBFOX1-207ENST00000547338 TRGV4A0A0C4DH28 118 aa12.06□□□□□ -0.48
RBFOX1-207ENST00000547338 IGHV3-38A0A0C4DH36 116 aa12.06□□□□□ -0.48
RBFOX1-207ENST00000547338 GAGE7O76087 117 aa12.06□□□□□ -0.48
RBFOX1-207ENST00000547338 IGHV3-30P01768 117 aa12.06□□□□□ -0.48
RBFOX1-207ENST00000547338 GAGE12FP0CL80 117 aa12.06□□□□□ -0.48
RBFOX1-207ENST00000547338 GAGE12GP0CL81 117 aa12.06□□□□□ -0.48
RBFOX1-207ENST00000547338 GAGE12IP0CL82 117 aa12.06□□□□□ -0.48
RBFOX1-207ENST00000547338 IGHV3-30-3P0DP02 117 aa12.06□□□□□ -0.48
RBFOX1-207ENST00000547338 IGHV3-30-5P0DP03 117 aa12.06□□□□□ -0.48
RBFOX1-207ENST00000547338 VSIG2Q96IQ7 327 aa12.06□□□□□ -0.48
RBFOX1-207ENST00000547338 LYRM7Q5U5X0 104 aa12.06□□□□□ -0.48
RBFOX1-207ENST00000547338 Q6ZUT4 128 aa12.06□□□□□ -0.48
RBFOX1-207ENST00000547338 TMEM101Q96IK0 257 aa12.06□□□□□ -0.48
RBFOX1-207ENST00000547338 TMEM243Q9BU79 118 aa12.06□□□□□ -0.48
RBFOX1-207ENST00000547338 RPL24P83731 157 aaKnown RBP12.05□□□□□ -0.48
RBFOX1-207ENST00000547338 Q6ZTC4 211 aa12.05□□□□□ -0.48
RBFOX1-207ENST00000547338 GAGE12JA6NER3 117 aa12.04□□□□□ -0.48
RBFOX1-207ENST00000547338 TIMM17BO60830 172 aa12.04□□□□□ -0.48
RBFOX1-207ENST00000547338 GAGE4Q13068 117 aa12.04□□□□□ -0.48
RBFOX1-207ENST00000547338 GAGE5Q13069 117 aa12.04□□□□□ -0.48
RBFOX1-207ENST00000547338 FHL2Q14192 279 aa12.04□□□□□ -0.48
RBFOX1-207ENST00000547338 GAGE13Q4V321 117 aa12.04□□□□□ -0.48
RBFOX1-207ENST00000547338 KLK5Q9Y337 293 aaPredicted RBP12.04□□□□□ -0.48
RBFOX1-207ENST00000547338 KMT2AQ03164 3969 aa12.04□□□□□ -0.48
RBFOX1-207ENST00000547338 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.03□□□□□ -0.48
RBFOX1-207ENST00000547338 LYRM9A8MSI8 78 aa12.03□□□□□ -0.48
RBFOX1-207ENST00000547338 UBE2L6O14933 153 aa12.03□□□□□ -0.48
RBFOX1-207ENST00000547338 NTM-AS1Q6ZSK4 140 aa12.03□□□□□ -0.48
RBFOX1-207ENST00000547338 EPPK1P58107 5090 aaKnown RBP12.03□□□□□ -0.48
RBFOX1-207ENST00000547338 K7ERJ3 54 aa12.02□□□□□ -0.48
RBFOX1-207ENST00000547338 CDC42SE2Q9NRR3 84 aa12.02□□□□□ -0.48
RBFOX1-207ENST00000547338 A0A0J9YXY3 114 aa12.01□□□□□ -0.49
RBFOX1-207ENST00000547338 LINC00694P0DN24 101 aa12.01□□□□□ -0.49
RBFOX1-207ENST00000547338 F8W1H4 67 aa12.01□□□□□ -0.49
RBFOX1-207ENST00000547338 SPANXDQ9BXN6 97 aa12.01□□□□□ -0.49
RBFOX1-207ENST00000547338 SPANXCQ9NY87 97 aa12.01□□□□□ -0.49
RBFOX1-207ENST00000547338 NDUFA12Q9UI09 145 aa12.01□□□□□ -0.49
RBFOX1-207ENST00000547338 K7ERU9 68 aa12□□□□□ -0.49
RBFOX1-207ENST00000547338 APLNQ9ULZ1 77 aa12□□□□□ -0.49
RBFOX1-207ENST00000547338 IGLV5-39A0A0G2JS06 123 aa11.99□□□□□ -0.49
RBFOX1-207ENST00000547338 LY6G6CO95867 125 aa11.99□□□□□ -0.49
RBFOX1-207ENST00000547338 IFITM1P13164 125 aa11.99□□□□□ -0.49
RBFOX1-207ENST00000547338 C10orf126Q8N4M7 172 aa11.99□□□□□ -0.49
RBFOX1-207ENST00000547338 COPS9Q8WXC6 57 aa11.99□□□□□ -0.49
RBFOX1-207ENST00000547338 A0A0B4J2C4 111 aa11.98□□□□□ -0.49
RBFOX1-207ENST00000547338 CIRBPQ14011 172 aaKnown RBP11.98□□□□□ -0.49
RBFOX1-207ENST00000547338 LINC00242Q5T6M2 205 aa11.98□□□□□ -0.49
RBFOX1-207ENST00000547338 NAA38Q9BRA0 125 aaKnown RBP11.98□□□□□ -0.49
RBFOX1-207ENST00000547338 PGPEP1Q9NXJ5 209 aa11.98□□□□□ -0.49
RBFOX1-207ENST00000547338 PRO1854Q9UHT4 67 aa11.98□□□□□ -0.49
RBFOX1-207ENST00000547338 DNAH6Q9C0G6 4158 aa11.97□□□□□ -0.49
RBFOX1-207ENST00000547338 TRBV6-8A0A0A6YYG3 113 aa11.97□□□□□ -0.49
RBFOX1-207ENST00000547338 TRAV10A0A0B4J240 114 aa11.97□□□□□ -0.49
RBFOX1-207ENST00000547338 NDUFA1O15239 70 aa11.97□□□□□ -0.49
RBFOX1-207ENST00000547338 FAM222AQ5U5X8 452 aa11.97□□□□□ -0.49
RBFOX1-207ENST00000547338 CDKN2A-AS1Q9UH64 79 aa11.97□□□□□ -0.49
RBFOX1-207ENST00000547338 CFC1BP0CG36 223 aa11.96□□□□□ -0.49
RBFOX1-207ENST00000547338 CFC1P0CG37 223 aa11.96□□□□□ -0.49
RBFOX1-207ENST00000547338 OCIAD2Q56VL3 154 aa11.96□□□□□ -0.49
RBFOX1-207ENST00000547338 RNASE13Q5GAN3 156 aaKnown RBP11.96□□□□□ -0.49
RBFOX1-207ENST00000547338 PPDPFQ9H3Y8 114 aa11.96□□□□□ -0.49
RBFOX1-207ENST00000547338 CBY1Q9Y3M2 126 aa11.96□□□□□ -0.49
RBFOX1-207ENST00000547338 TRBV20-1A0A075B6N2 111 aa11.96□□□□□ -0.5
RBFOX1-207ENST00000547338 TRAV8-3A0A0A6YYJ7 113 aa11.96□□□□□ -0.5
RBFOX1-207ENST00000547338 SPART-AS1P0CW21 52 aa11.96□□□□□ -0.5
RBFOX1-207ENST00000547338 PRO0255Q9UI72 69 aa11.96□□□□□ -0.5
RBFOX1-207ENST00000547338 IGHV3-64A0A075B6Q5 118 aa11.95□□□□□ -0.5
RBFOX1-207ENST00000547338 DEFB131BA0A096LNP1 70 aa11.95□□□□□ -0.5
RBFOX1-207ENST00000547338 SPINK8P0C7L1 97 aa11.95□□□□□ -0.5
RBFOX1-207ENST00000547338 MUSTN1Q8IVN3 82 aa11.95□□□□□ -0.5
RBFOX1-207ENST00000547338 APOMO95445 188 aa11.94□□□□□ -0.5
RBFOX1-207ENST00000547338 HERV-K104P63124 156 aa11.94□□□□□ -0.5
RBFOX1-207ENST00000547338 LITAFQ99732 161 aa11.94□□□□□ -0.5
RBFOX1-207ENST00000547338 DNAH10Q8IVF4 4471 aa11.94□□□□□ -0.5
RBFOX1-207ENST00000547338 A4D1N5 150 aa11.93□□□□□ -0.5
RBFOX1-207ENST00000547338 TSPAN13O95857 204 aa11.93□□□□□ -0.5
RBFOX1-207ENST00000547338 MIAQ16674 131 aa11.93□□□□□ -0.5
RBFOX1-207ENST00000547338 ATP6V0E2Q8NHE4 81 aa11.92□□□□□ -0.5
RBFOX1-207ENST00000547338 FRAS1Q86XX4 4008 aa11.92□□□□□ -0.5
RBFOX1-207ENST00000547338 A0A1B0GUV1 79 aa11.91□□□□□ -0.5
RBFOX1-207ENST00000547338 DEFB130BP0DP73 79 aa11.91□□□□□ -0.5
RBFOX1-207ENST00000547338 DEFB130AP0DP74 79 aa11.91□□□□□ -0.5
RBFOX1-207ENST00000547338 COX6A2Q02221 97 aa11.91□□□□□ -0.5
RBFOX1-207ENST00000547338 ERG28Q9UKR5 140 aa11.91□□□□□ -0.5
RBFOX1-207ENST00000547338 SFTA2Q6UW10 78 aa11.91□□□□□ -0.5
RBFOX1-207ENST00000547338 TRAV13-1A0A0B4J241 112 aa11.9□□□□□ -0.5
RBFOX1-207ENST00000547338 LOC100131303A0A0U1RQF7 123 aa11.9□□□□□ -0.5
RBFOX1-207ENST00000547338 TEX48A0A1B0GUV7 120 aa11.9□□□□□ -0.5
RBFOX1-207ENST00000547338 SMIM1B2RUZ4 78 aa11.9□□□□□ -0.5
RBFOX1-207ENST00000547338 F5H768 121 aa11.89□□□□□ -0.51
RBFOX1-207ENST00000547338 IGHV3-33P01772 117 aa11.89□□□□□ -0.51
RBFOX1-207ENST00000547338 SH2D6Q7Z4S9 175 aa11.89□□□□□ -0.51
RBFOX1-207ENST00000547338 CHCHD5Q9BSY4 110 aa11.89□□□□□ -0.51
RBFOX1-207ENST00000547338 TRAV26-1A0A087WT03 109 aa11.88□□□□□ -0.51
RBFOX1-207ENST00000547338 PRSS2P07478 247 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms