RNA–Protein interactions for RNA: ENST00000543744.1

PTPN6-222, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best)

Gene PTPN6, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-222ENST00000543744 DEFB130AP0DP74 79 aa12.55□□□□□ -0.4
PTPN6-222ENST00000543744 INSL3P51460 131 aa12.55□□□□□ -0.4
PTPN6-222ENST00000543744 DAND5Q8N907 189 aa12.55□□□□□ -0.4
PTPN6-222ENST00000543744 F5H768 121 aa12.54□□□□□ -0.4
PTPN6-222ENST00000543744 FOXI1Q12951 378 aa12.54□□□□□ -0.4
PTPN6-222ENST00000543744 TRBV6-8A0A0A6YYG3 113 aa12.54□□□□□ -0.4
PTPN6-222ENST00000543744 TRBV30A0A0K0K1B3 111 aa12.54□□□□□ -0.4
PTPN6-222ENST00000543744 GAGE6Q13070 117 aa12.54□□□□□ -0.4
PTPN6-222ENST00000543744 KIR2DL5BQ8NHK3 375 aa12.54□□□□□ -0.4
PTPN6-222ENST00000543744 INAFM1C9JVW0 142 aa12.53□□□□□ -0.4
PTPN6-222ENST00000543744 ZNF625Q96I27 306 aaPredicted RBP12.53□□□□□ -0.4
PTPN6-222ENST00000543744 TEN1Q86WV5 123 aa12.52□□□□□ -0.4
PTPN6-222ENST00000543744 NOTCH2Q04721 2471 aa12.52□□□□□ -0.41
PTPN6-222ENST00000543744 GAGE12HA6NDE8 117 aa12.52□□□□□ -0.41
PTPN6-222ENST00000543744 TRIAP1O43715 76 aa12.52□□□□□ -0.41
PTPN6-222ENST00000543744 ATXN8Q156A1 80 aa12.52□□□□□ -0.41
PTPN6-222ENST00000543744 PRIMA1Q86XR5 153 aa12.52□□□□□ -0.41
PTPN6-222ENST00000543744 CHCHD5Q9BSY4 110 aa12.52□□□□□ -0.41
PTPN6-222ENST00000543744 C9orf66Q5T8R8 295 aa12.51□□□□□ -0.41
PTPN6-222ENST00000543744 ICOSQ9Y6W8 199 aa12.51□□□□□ -0.41
PTPN6-222ENST00000543744 C9JAW5 83 aa12.5□□□□□ -0.41
PTPN6-222ENST00000543744 LINC00612Q8N6U2 182 aa12.5□□□□□ -0.41
PTPN6-222ENST00000543744 SMIM9A6NGZ8 99 aa12.5□□□□□ -0.41
PTPN6-222ENST00000543744 SLC25A20O43772 301 aa12.5□□□□□ -0.41
PTPN6-222ENST00000543744 LINC00308Q8TCZ7 52 aa12.5□□□□□ -0.41
PTPN6-222ENST00000543744 A0A0U1RRA0 63 aa12.49□□□□□ -0.41
PTPN6-222ENST00000543744 MEIG1Q5JSS6 88 aa12.49□□□□□ -0.41
PTPN6-222ENST00000543744 PPDPFLQ8WWR9 84 aa12.49□□□□□ -0.41
PTPN6-222ENST00000543744 COPS9Q8WXC6 57 aa12.49□□□□□ -0.41
PTPN6-222ENST00000543744 X6R8D5 127 aa12.49□□□□□ -0.41
PTPN6-222ENST00000543744 COX6CP09669 75 aa12.49□□□□□ -0.41
PTPN6-222ENST00000543744 HERV-K104P63124 156 aa12.49□□□□□ -0.41
PTPN6-222ENST00000543744 SPATA25Q9BR10 227 aa12.49□□□□□ -0.41
PTPN6-222ENST00000543744 OTOGQ6ZRI0 2925 aa12.48□□□□□ -0.41
PTPN6-222ENST00000543744 IGLV4-60A0A075B6I1 120 aa12.48□□□□□ -0.41
PTPN6-222ENST00000543744 IGKV3OR2-268A0A0C4DH90 116 aa12.48□□□□□ -0.41
PTPN6-222ENST00000543744 SPATA3Q8NHX4 192 aa12.48□□□□□ -0.41
PTPN6-222ENST00000543744 SIGMAR1Q99720 223 aa12.48□□□□□ -0.41
PTPN6-222ENST00000543744 RPL13AP40429 203 aaKnown RBP12.47□□□□□ -0.41
PTPN6-222ENST00000543744 FN1P02751 2386 aaKnown RBP12.47□□□□□ -0.41
PTPN6-222ENST00000543744 M0QXV9 152 aa12.47□□□□□ -0.41
PTPN6-222ENST00000543744 LINC01620Q4KN68 170 aa12.47□□□□□ -0.41
PTPN6-222ENST00000543744 ANKRD29Q8N6D5 301 aa12.47□□□□□ -0.41
PTPN6-222ENST00000543744 GYPEP15421 78 aa12.46□□□□□ -0.41
PTPN6-222ENST00000543744 CARD19Q96LW7 228 aa12.46□□□□□ -0.41
PTPN6-222ENST00000543744 COX7B2Q8TF08 81 aa12.44□□□□□ -0.42
PTPN6-222ENST00000543744 NSD1Q96L73 2696 aaPredicted RBP12.44□□□□□ -0.42
PTPN6-222ENST00000543744 VWFP04275 2813 aa12.44□□□□□ -0.42
PTPN6-222ENST00000543744 PRO0255Q9UI72 69 aa12.44□□□□□ -0.42
PTPN6-222ENST00000543744 FAM222AQ5U5X8 452 aa12.43□□□□□ -0.42
PTPN6-222ENST00000543744 SOSTDC1Q6X4U4 206 aa12.43□□□□□ -0.42
PTPN6-222ENST00000543744 IGHV3OR16-9A0A0B4J2B5 98 aa12.42□□□□□ -0.42
PTPN6-222ENST00000543744 LYRM9A8MSI8 78 aa12.42□□□□□ -0.42
PTPN6-222ENST00000543744 TOMM7Q9P0U1 55 aa12.42□□□□□ -0.42
PTPN6-222ENST00000543744 TRBV10-2A0A0K0K1G8 114 aa12.41□□□□□ -0.42
PTPN6-222ENST00000543744 DEFB135Q30KP9 77 aa12.41□□□□□ -0.42
PTPN6-222ENST00000543744 TMEM262E9PQX1 116 aa12.4□□□□□ -0.42
PTPN6-222ENST00000543744 APOC4P55056 127 aa12.4□□□□□ -0.42
PTPN6-222ENST00000543744 CLEC2BQ92478 149 aa12.4□□□□□ -0.42
PTPN6-222ENST00000543744 A0A087WZ39 114 aa12.39□□□□□ -0.43
PTPN6-222ENST00000543744 LINC00959A0A1B0GUT2 108 aa12.39□□□□□ -0.43
PTPN6-222ENST00000543744 LINC01600Q96MT4 127 aa12.39□□□□□ -0.43
PTPN6-222ENST00000543744 CITED1Q99966 193 aa12.39□□□□□ -0.43
PTPN6-222ENST00000543744 PPDPFQ9H3Y8 114 aa12.39□□□□□ -0.43
PTPN6-222ENST00000543744 NBEAL2Q6ZNJ1 2754 aa12.39□□□□□ -0.43
PTPN6-222ENST00000543744 LST1O00453 97 aa12.38□□□□□ -0.43
PTPN6-222ENST00000543744 PAX4O43316 350 aa12.38□□□□□ -0.43
PTPN6-222ENST00000543744 TENM1Q9UKZ4 2725 aa12.38□□□□□ -0.43
PTPN6-222ENST00000543744 A0A1B0GUV1 79 aa12.38□□□□□ -0.43
PTPN6-222ENST00000543744 DEFB4AO15263 64 aa12.37□□□□□ -0.43
PTPN6-222ENST00000543744 C5orf38Q86SI9 138 aa12.37□□□□□ -0.43
PTPN6-222ENST00000543744 CDIP1Q9H305 208 aa12.37□□□□□ -0.43
PTPN6-222ENST00000543744 A0A096LPF7 62 aa12.37□□□□□ -0.43
PTPN6-222ENST00000543744 NTN5Q8WTR8 489 aaPredicted RBP12.37□□□□□ -0.43
PTPN6-222ENST00000543744 C2orf82Q6UX34 121 aa12.36□□□□□ -0.43
PTPN6-222ENST00000543744 IGHV4-28A0A0C4DH34 117 aa12.35□□□□□ -0.43
PTPN6-222ENST00000543744 SCGB1A1P11684 91 aa12.35□□□□□ -0.43
PTPN6-222ENST00000543744 SS18Q15532 418 aa12.35□□□□□ -0.43
PTPN6-222ENST00000543744 MIR7-3HGQ8N6C7 128 aa12.35□□□□□ -0.43
PTPN6-222ENST00000543744 SHISA2Q6UWI4 295 aa12.34□□□□□ -0.43
PTPN6-222ENST00000543744 H3BT86 120 aa12.33□□□□□ -0.43
PTPN6-222ENST00000543744 XCL1P47992 114 aa12.33□□□□□ -0.43
PTPN6-222ENST00000543744 LINC00158P58513 81 aa12.33□□□□□ -0.43
PTPN6-222ENST00000543744 DAD1P61803 113 aa12.33□□□□□ -0.43
PTPN6-222ENST00000543744 HIVEP1P15822 2718 aa12.33□□□□□ -0.44
PTPN6-222ENST00000543744 COX7A2LO14548 114 aa12.33□□□□□ -0.44
PTPN6-222ENST00000543744 TEX49A0A1B0GTD5 131 aa12.32□□□□□ -0.44
PTPN6-222ENST00000543744 IBA57-AS1B1ANH7 110 aa12.32□□□□□ -0.44
PTPN6-222ENST00000543744 MIFP14174 115 aa12.31□□□□□ -0.44
PTPN6-222ENST00000543744 C6orf226Q5I0X4 101 aa12.31□□□□□ -0.44
PTPN6-222ENST00000543744 WFDC9Q8NEX5 89 aa12.31□□□□□ -0.44
PTPN6-222ENST00000543744 UBE2WQ96B02 151 aa12.31□□□□□ -0.44
PTPN6-222ENST00000543744 ATRQ13535 2644 aa12.31□□□□□ -0.44
PTPN6-222ENST00000543744 TRAV13-2A0A0B4J235 113 aa12.3□□□□□ -0.44
PTPN6-222ENST00000543744 CLPSL2Q6UWE3 100 aa12.3□□□□□ -0.44
PTPN6-222ENST00000543744 SND1-IT1Q9HBX3 110 aa12.3□□□□□ -0.44
PTPN6-222ENST00000543744 ATP5G1P05496 136 aa12.3□□□□□ -0.44
PTPN6-222ENST00000543744 Q8NAQ8 132 aa12.3□□□□□ -0.44
PTPN6-222ENST00000543744 TEP1Q99973 2627 aaKnown RBP12.29□□□□□ -0.44
PTPN6-222ENST00000543744 CRPP02741 224 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms