RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 LINC01620Q4KN68 170 aa10.71□□□□□ -0.7
VARS2-211ENST00000541562 RPL32P62910 135 aaKnown RBP10.7□□□□□ -0.7
VARS2-211ENST00000541562 LITAFQ99732 161 aa10.7□□□□□ -0.7
VARS2-211ENST00000541562 COL6A5A8TX70 2615 aa10.7□□□□□ -0.7
VARS2-211ENST00000541562 LINC00158P58513 81 aa10.7□□□□□ -0.7
VARS2-211ENST00000541562 OR13C6PQ8NH95 151 aa10.7□□□□□ -0.7
VARS2-211ENST00000541562 PPDPFLQ8WWR9 84 aa10.69□□□□□ -0.7
VARS2-211ENST00000541562 SOSTDC1Q6X4U4 206 aa10.69□□□□□ -0.7
VARS2-211ENST00000541562 RNASE1P07998 156 aaKnown RBP10.69□□□□□ -0.7
VARS2-211ENST00000541562 GIG44P09565 113 aaPredicted RBP10.68□□□□□ -0.7
VARS2-211ENST00000541562 LYRM7Q5U5X0 104 aa10.68□□□□□ -0.7
VARS2-211ENST00000541562 DNAJC30Q96LL9 226 aa10.67□□□□□ -0.7
VARS2-211ENST00000541562 TINCRA0A1B0GVN0 87 aa10.67□□□□□ -0.7
VARS2-211ENST00000541562 ATP5G1P05496 136 aa10.67□□□□□ -0.7
VARS2-211ENST00000541562 PRR3P79522 188 aaKnown RBP10.67□□□□□ -0.7
VARS2-211ENST00000541562 DEFB135Q30KP9 77 aa10.67□□□□□ -0.7
VARS2-211ENST00000541562 ATXN8Q156A1 80 aa10.66□□□□□ -0.7
VARS2-211ENST00000541562 MIAQ16674 131 aa10.66□□□□□ -0.7
VARS2-211ENST00000541562 SPANXA1Q9NS26 97 aa10.66□□□□□ -0.7
VARS2-211ENST00000541562 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.66□□□□□ -0.7
VARS2-211ENST00000541562 CIRBPQ14011 172 aaKnown RBP10.65□□□□□ -0.7
VARS2-211ENST00000541562 TMEM243Q9BU79 118 aa10.65□□□□□ -0.7
VARS2-211ENST00000541562 BAHCC1Q9P281 2608 aa10.65□□□□□ -0.7
VARS2-211ENST00000541562 TRAV4A0A0B4J268 109 aa10.65□□□□□ -0.7
VARS2-211ENST00000541562 ANK3Q12955 4377 aaKnown RBP10.64□□□□□ -0.71
VARS2-211ENST00000541562 SMIM1B2RUZ4 78 aa10.64□□□□□ -0.71
VARS2-211ENST00000541562 COX6CP09669 75 aa10.64□□□□□ -0.71
VARS2-211ENST00000541562 LINC00308Q8TCZ7 52 aa10.64□□□□□ -0.71
VARS2-211ENST00000541562 TRAV26-1A0A087WT03 109 aa10.64□□□□□ -0.71
VARS2-211ENST00000541562 MIR7-3HGQ8N6C7 128 aa10.64□□□□□ -0.71
VARS2-211ENST00000541562 RNF152Q8N8N0 203 aa10.64□□□□□ -0.71
VARS2-211ENST00000541562 PYGO1Q9Y3Y4 419 aa10.64□□□□□ -0.71
VARS2-211ENST00000541562 GYPEP15421 78 aa10.64□□□□□ -0.71
VARS2-211ENST00000541562 H7C423 109 aa10.63□□□□□ -0.71
VARS2-211ENST00000541562 MGAM2Q2M2H8 2515 aa10.63□□□□□ -0.71
VARS2-211ENST00000541562 SLPIP03973 132 aa10.63□□□□□ -0.71
VARS2-211ENST00000541562 ZFAND6Q6FIF0 208 aa10.62□□□□□ -0.71
VARS2-211ENST00000541562 INAFM1C9JVW0 142 aa10.62□□□□□ -0.71
VARS2-211ENST00000541562 KRTAP10-3P60369 221 aa10.62□□□□□ -0.71
VARS2-211ENST00000541562 SPATA25Q9BR10 227 aa10.62□□□□□ -0.71
VARS2-211ENST00000541562 CDC42SE2Q9NRR3 84 aa10.62□□□□□ -0.71
VARS2-211ENST00000541562 PAX4O43316 350 aa10.61□□□□□ -0.71
VARS2-211ENST00000541562 RNF183Q96D59 192 aa10.61□□□□□ -0.71
VARS2-211ENST00000541562 TENM3Q9P273 2699 aa10.61□□□□□ -0.71
VARS2-211ENST00000541562 TRAV8-4A0A0B4J246 113 aa10.6□□□□□ -0.71
VARS2-211ENST00000541562 A0A0B4J2C4 111 aa10.6□□□□□ -0.71
VARS2-211ENST00000541562 C9orf116Q5BN46 136 aaPredicted RBP10.6□□□□□ -0.71
VARS2-211ENST00000541562 UBE2WQ96B02 151 aa10.6□□□□□ -0.71
VARS2-211ENST00000541562 HERVK_113P63121 156 aa10.6□□□□□ -0.71
VARS2-211ENST00000541562 BEAN1Q3B7T3 259 aa10.6□□□□□ -0.71
VARS2-211ENST00000541562 CRYBA4P53673 196 aa10.59□□□□□ -0.71
VARS2-211ENST00000541562 C15orf53Q8NAA6 179 aa10.59□□□□□ -0.71
VARS2-211ENST00000541562 C6orf226Q5I0X4 101 aa10.59□□□□□ -0.71
VARS2-211ENST00000541562 SNCGO76070 127 aa10.58□□□□□ -0.72
VARS2-211ENST00000541562 FAM218AQ96MZ4 157 aa10.58□□□□□ -0.72
VARS2-211ENST00000541562 PLAC8L1A1L4L8 177 aa10.58□□□□□ -0.72
VARS2-211ENST00000541562 KRTAP1-1Q07627 177 aa10.58□□□□□ -0.72
VARS2-211ENST00000541562 CLUHP3Q96NS8 147 aa10.57□□□□□ -0.72
VARS2-211ENST00000541562 ANAPC13Q9BS18 74 aa10.57□□□□□ -0.72
VARS2-211ENST00000541562 FAM222AQ5U5X8 452 aa10.56□□□□□ -0.72
VARS2-211ENST00000541562 TEX29Q8N6K0 151 aa10.56□□□□□ -0.72
VARS2-211ENST00000541562 NDUFA1O15239 70 aa10.56□□□□□ -0.72
VARS2-211ENST00000541562 TRBV10-2A0A0K0K1G8 114 aa10.55□□□□□ -0.72
VARS2-211ENST00000541562 FHL2Q14192 279 aa10.55□□□□□ -0.72
VARS2-211ENST00000541562 SND1-IT1Q9HBX3 110 aa10.55□□□□□ -0.72
VARS2-211ENST00000541562 DAZ2Q13117 558 aaKnown RBP10.55□□□□□ -0.72
VARS2-211ENST00000541562 DAZ4Q86SG3 579 aaKnown RBP10.55□□□□□ -0.72
VARS2-211ENST00000541562 DAZ3Q9NR90 486 aaKnown RBP10.55□□□□□ -0.72
VARS2-211ENST00000541562 COX7B2Q8TF08 81 aa10.54□□□□□ -0.72
VARS2-211ENST00000541562 LY6G6DO95868 133 aa10.54□□□□□ -0.72
VARS2-211ENST00000541562 IGLV1-51P01701 117 aa10.54□□□□□ -0.72
VARS2-211ENST00000541562 LINC00269Q8N2A0 174 aa10.54□□□□□ -0.72
VARS2-211ENST00000541562 F5H768 121 aa10.54□□□□□ -0.72
VARS2-211ENST00000541562 ANGP03950 147 aaKnown RBP10.54□□□□□ -0.72
VARS2-211ENST00000541562 GAGE2BQ13066 116 aa10.54□□□□□ -0.72
VARS2-211ENST00000541562 GAGE2EQ4V326 116 aa10.54□□□□□ -0.72
VARS2-211ENST00000541562 FAM110AQ9BQ89 295 aa10.54□□□□□ -0.72
VARS2-211ENST00000541562 GAGE2DQ9UEU5 116 aa10.54□□□□□ -0.72
VARS2-211ENST00000541562 A8MTW9 85 aa10.53□□□□□ -0.72
VARS2-211ENST00000541562 C16orf74Q96GX8 76 aa10.53□□□□□ -0.72
VARS2-211ENST00000541562 C19orf73Q9NVV2 129 aa10.53□□□□□ -0.72
VARS2-211ENST00000541562 TRBV30A0A0K0K1B3 111 aa10.53□□□□□ -0.72
VARS2-211ENST00000541562 TRBV6-8A0A0A6YYG3 113 aa10.52□□□□□ -0.72
VARS2-211ENST00000541562 B5MCH6 92 aa10.52□□□□□ -0.72
VARS2-211ENST00000541562 LINC00337Q8N6G1 96 aa10.52□□□□□ -0.72
VARS2-211ENST00000541562 GAGE2AQ6NT46 116 aa10.52□□□□□ -0.73
VARS2-211ENST00000541562 SPANXDQ9BXN6 97 aa10.52□□□□□ -0.73
VARS2-211ENST00000541562 SPANXCQ9NY87 97 aa10.52□□□□□ -0.73
VARS2-211ENST00000541562 SS18L2Q9UHA2 77 aa10.52□□□□□ -0.73
VARS2-211ENST00000541562 J3QKU1 62 aa10.52□□□□□ -0.73
VARS2-211ENST00000541562 BAALC-AS2P0C853 105 aa10.52□□□□□ -0.73
VARS2-211ENST00000541562 C9orf129Q5T035 196 aaKnown RBP10.52□□□□□ -0.73
VARS2-211ENST00000541562 ATP6V0E2Q8NHE4 81 aa10.52□□□□□ -0.73
VARS2-211ENST00000541562 TIRAPP58753 221 aa10.51□□□□□ -0.73
VARS2-211ENST00000541562 LRRC75A-AS1Q8N1F1 130 aa10.51□□□□□ -0.73
VARS2-211ENST00000541562 CRPP02741 224 aa10.51□□□□□ -0.73
VARS2-211ENST00000541562 A0A087WYN8 130 aa10.5□□□□□ -0.73
VARS2-211ENST00000541562 LST1O00453 97 aa10.5□□□□□ -0.73
VARS2-211ENST00000541562 C6orf223Q8N319 242 aa10.49□□□□□ -0.73
VARS2-211ENST00000541562 CSNK1G2-AS1Q8NCQ2 148 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms