RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 C4orf48Q5BLP8 95 aa10.86□□□□□ -0.67
SMARCA4-207ENST00000541122 LELP1Q5T871 98 aa10.86□□□□□ -0.67
SMARCA4-207ENST00000541122 A0A087WZ39 114 aa10.86□□□□□ -0.67
SMARCA4-207ENST00000541122 TRBV10-3A0A0K0K1G6 114 aa10.86□□□□□ -0.67
SMARCA4-207ENST00000541122 Q6ZSV7 163 aa10.85□□□□□ -0.67
SMARCA4-207ENST00000541122 BRI3O95415 125 aa10.85□□□□□ -0.67
SMARCA4-207ENST00000541122 BBC3Q96PG8 261 aaPredicted RBP10.85□□□□□ -0.67
SMARCA4-207ENST00000541122 WFDC13Q8IUB5 93 aa10.85□□□□□ -0.67
SMARCA4-207ENST00000541122 IGKV2-24A0A0C4DH68 120 aa10.84□□□□□ -0.67
SMARCA4-207ENST00000541122 C11orf45Q8TAV5 145 aa10.84□□□□□ -0.67
SMARCA4-207ENST00000541122 IGHV4-31P0DP07 118 aa10.84□□□□□ -0.67
SMARCA4-207ENST00000541122 K7ERS5 55 aa10.84□□□□□ -0.67
SMARCA4-207ENST00000541122 ZNF702PQ9H963 129 aa10.84□□□□□ -0.67
SMARCA4-207ENST00000541122 PRO0461Q9UI25 63 aa10.84□□□□□ -0.67
SMARCA4-207ENST00000541122 WNK1Q9H4A3 2382 aa10.84□□□□□ -0.67
SMARCA4-207ENST00000541122 Q8N9L7 120 aa10.83□□□□□ -0.68
SMARCA4-207ENST00000541122 FAM30AQ9NZY2 134 aa10.83□□□□□ -0.68
SMARCA4-207ENST00000541122 PRR14LQ5THK1 2151 aa10.83□□□□□ -0.68
SMARCA4-207ENST00000541122 NAV3Q8IVL0 2385 aa10.83□□□□□ -0.68
SMARCA4-207ENST00000541122 CRYGAP11844 174 aa10.83□□□□□ -0.68
SMARCA4-207ENST00000541122 LOC100131303A0A0U1RQF7 123 aa10.82□□□□□ -0.68
SMARCA4-207ENST00000541122 RPS28P62857 69 aaKnown RBP10.82□□□□□ -0.68
SMARCA4-207ENST00000541122 C10orf99Q6UWK7 81 aa10.82□□□□□ -0.68
SMARCA4-207ENST00000541122 Q8N3U1 123 aa10.82□□□□□ -0.68
SMARCA4-207ENST00000541122 COX6A2Q02221 97 aa10.81□□□□□ -0.68
SMARCA4-207ENST00000541122 PPDPFQ9H3Y8 114 aa10.81□□□□□ -0.68
SMARCA4-207ENST00000541122 CPAMD8Q8IZJ3 1885 aa10.81□□□□□ -0.68
SMARCA4-207ENST00000541122 PRR4Q16378 134 aa10.81□□□□□ -0.68
SMARCA4-207ENST00000541122 SMCPP49901 116 aaPredicted RBP10.8□□□□□ -0.68
SMARCA4-207ENST00000541122 PRO0628Q9UI54 55 aa10.8□□□□□ -0.68
SMARCA4-207ENST00000541122 BCE1O60756 84 aa10.8□□□□□ -0.68
SMARCA4-207ENST00000541122 SOSTDC1Q6X4U4 206 aa10.8□□□□□ -0.68
SMARCA4-207ENST00000541122 IGKV2-28A0A075B6P5 120 aa10.8□□□□□ -0.68
SMARCA4-207ENST00000541122 IGKV2D-28P01615 120 aa10.8□□□□□ -0.68
SMARCA4-207ENST00000541122 LINC00846Q9NV44 126 aa10.8□□□□□ -0.68
SMARCA4-207ENST00000541122 ARHGAP32A7KAX9 2087 aa10.79□□□□□ -0.68
SMARCA4-207ENST00000541122 PMAIP1Q13794 54 aa10.79□□□□□ -0.68
SMARCA4-207ENST00000541122 CYSRT1A8MQ03 144 aa10.79□□□□□ -0.68
SMARCA4-207ENST00000541122 SBSPONQ8IVN8 264 aa10.79□□□□□ -0.68
SMARCA4-207ENST00000541122 ZNF580Q9UK33 172 aa10.79□□□□□ -0.68
SMARCA4-207ENST00000541122 PTPRQQ9UMZ3 2332 aa10.78□□□□□ -0.68
SMARCA4-207ENST00000541122 C19orf84I3L1E1 186 aa10.78□□□□□ -0.68
SMARCA4-207ENST00000541122 COL5A1P20908 1838 aaPredicted RBP10.78□□□□□ -0.68
SMARCA4-207ENST00000541122 DEFB131BA0A096LNP1 70 aa10.78□□□□□ -0.68
SMARCA4-207ENST00000541122 EGFEM1PQ0D2K5 195 aa10.78□□□□□ -0.68
SMARCA4-207ENST00000541122 LINC01561Q8N1V8 128 aa10.78□□□□□ -0.68
SMARCA4-207ENST00000541122 BEAN1Q3B7T3 259 aa10.77□□□□□ -0.68
SMARCA4-207ENST00000541122 CELA1Q9UNI1 258 aa10.77□□□□□ -0.68
SMARCA4-207ENST00000541122 TMEM254Q8TBM7 123 aa10.77□□□□□ -0.69
SMARCA4-207ENST00000541122 LRP4O75096 1905 aa10.77□□□□□ -0.69
SMARCA4-207ENST00000541122 A0A096LNI7 61 aa10.76□□□□□ -0.69
SMARCA4-207ENST00000541122 CXCL6P80162 114 aa10.76□□□□□ -0.69
SMARCA4-207ENST00000541122 WFDC10AQ9H1F0 79 aa10.76□□□□□ -0.69
SMARCA4-207ENST00000541122 Q6ZVQ6 151 aa10.75□□□□□ -0.69
SMARCA4-207ENST00000541122 ZNF706Q9Y5V0 76 aaPredicted RBP10.75□□□□□ -0.69
SMARCA4-207ENST00000541122 KIF25-AS1Q9Y6Z4 181 aa10.75□□□□□ -0.69
SMARCA4-207ENST00000541122 SHISA2Q6UWI4 295 aa10.75□□□□□ -0.69
SMARCA4-207ENST00000541122 TRBV7-6A0A0J9YX20 115 aa10.74□□□□□ -0.69
SMARCA4-207ENST00000541122 PRM2P04554 102 aa10.74□□□□□ -0.69
SMARCA4-207ENST00000541122 TECTAO75443 2155 aa10.74□□□□□ -0.69
SMARCA4-207ENST00000541122 FAM208BQ5VWN6 2430 aa10.74□□□□□ -0.69
SMARCA4-207ENST00000541122 ZNF843Q8N446 348 aa10.74□□□□□ -0.69
SMARCA4-207ENST00000541122 C1orf137Q5JT78 98 aa10.73□□□□□ -0.69
SMARCA4-207ENST00000541122 HILS1P60008 231 aa10.73□□□□□ -0.69
SMARCA4-207ENST00000541122 UNQ6190/PRO20217Q6UXQ8 127 aa10.73□□□□□ -0.69
SMARCA4-207ENST00000541122 PTPRSQ13332 1948 aa10.73□□□□□ -0.69
SMARCA4-207ENST00000541122 IGLV5-39A0A0G2JS06 123 aa10.72□□□□□ -0.69
SMARCA4-207ENST00000541122 LINC01547P58512 204 aaPredicted RBP10.72□□□□□ -0.69
SMARCA4-207ENST00000541122 LINC00208Q96KT6 92 aa10.72□□□□□ -0.69
SMARCA4-207ENST00000541122 LINC00575Q6W349 94 aa10.72□□□□□ -0.69
SMARCA4-207ENST00000541122 ESRGQ1W209 222 aa10.72□□□□□ -0.69
SMARCA4-207ENST00000541122 DSCAMO60469 2012 aa10.71□□□□□ -0.69
SMARCA4-207ENST00000541122 A0A0J9YWU9 116 aa10.71□□□□□ -0.69
SMARCA4-207ENST00000541122 ODF3L2Q3SX64 289 aa10.71□□□□□ -0.69
SMARCA4-207ENST00000541122 SPG11Q96JI7 2443 aa10.7□□□□□ -0.7
SMARCA4-207ENST00000541122 IGLV4-60A0A075B6I1 120 aa10.7□□□□□ -0.7
SMARCA4-207ENST00000541122 F8WDY8 70 aa10.7□□□□□ -0.7
SMARCA4-207ENST00000541122 LINC00337Q8N6G1 96 aa10.7□□□□□ -0.7
SMARCA4-207ENST00000541122 KPRPQ5T749 579 aaPredicted RBP10.7□□□□□ -0.7
SMARCA4-207ENST00000541122 LINC00482Q8N8I6 264 aa10.69□□□□□ -0.7
SMARCA4-207ENST00000541122 A0A1B0GUV1 79 aa10.69□□□□□ -0.7
SMARCA4-207ENST00000541122 IL17DQ8TAD2 202 aa10.69□□□□□ -0.7
SMARCA4-207ENST00000541122 CEP192Q8TEP8 1941 aa10.68□□□□□ -0.7
SMARCA4-207ENST00000541122 C18orf65Q6ZTR6 163 aa10.68□□□□□ -0.7
SMARCA4-207ENST00000541122 C2CD3Q4AC94 2353 aa10.68□□□□□ -0.7
SMARCA4-207ENST00000541122 SRCAPQ6ZRS2 3230 aa10.68□□□□□ -0.7
SMARCA4-207ENST00000541122 TRAV10A0A0B4J240 114 aa10.68□□□□□ -0.7
SMARCA4-207ENST00000541122 LRCOL1A6NCL2 159 aa10.68□□□□□ -0.7
SMARCA4-207ENST00000541122 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.67□□□□□ -0.7
SMARCA4-207ENST00000541122 ACACBO00763 2458 aa10.67□□□□□ -0.7
SMARCA4-207ENST00000541122 RPL37AP8A6NKH3 93 aa10.67□□□□□ -0.7
SMARCA4-207ENST00000541122 EDN2P20800 178 aa10.66□□□□□ -0.7
SMARCA4-207ENST00000541122 PRR3P79522 188 aaKnown RBP10.66□□□□□ -0.7
SMARCA4-207ENST00000541122 GOLGB1Q14789 3259 aaKnown RBP10.66□□□□□ -0.7
SMARCA4-207ENST00000541122 C9orf116Q5BN46 136 aaPredicted RBP10.66□□□□□ -0.7
SMARCA4-207ENST00000541122 hDV103S1A0JD37 113 aa10.66□□□□□ -0.7
SMARCA4-207ENST00000541122 FHL2Q14192 279 aa10.65□□□□□ -0.7
SMARCA4-207ENST00000541122 ZFHX2Q9C0A1 2572 aaPredicted RBP10.65□□□□□ -0.7
SMARCA4-207ENST00000541122 C10orf25Q5T742 122 aa10.65□□□□□ -0.7
SMARCA4-207ENST00000541122 Q6ZSN1 163 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms