RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 G3V4G9 280 aa6.9□□□□□ -1.31
TTC39C-203ENST00000540918 CFC1BP0CG36 223 aa6.9□□□□□ -1.31
TTC39C-203ENST00000540918 CFC1P0CG37 223 aa6.9□□□□□ -1.31
TTC39C-203ENST00000540918 LINC00694P0DN24 101 aa6.9□□□□□ -1.31
TTC39C-203ENST00000540918 PIK3CD-AS1Q5SR53 167 aa6.9□□□□□ -1.31
TTC39C-203ENST00000540918 XAGE1AQ9HD64 81 aa6.9□□□□□ -1.31
TTC39C-203ENST00000540918 U3KQK5 164 aa6.9□□□□□ -1.31
TTC39C-203ENST00000540918 NIPBLQ6KC79 2804 aaeCLIP6.9□□□□□ -1.31
TTC39C-203ENST00000540918 RBX1P62877 108 aa6.9□□□□□ -1.31
TTC39C-203ENST00000540918 ZFAND6Q6FIF0 208 aa6.9□□□□□ -1.31
TTC39C-203ENST00000540918 NCR3O14931 201 aa6.89□□□□□ -1.31
TTC39C-203ENST00000540918 GAGE2AQ6NT46 116 aa6.89□□□□□ -1.31
TTC39C-203ENST00000540918 NFE4Q86UQ8 179 aa6.89□□□□□ -1.31
TTC39C-203ENST00000540918 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.89□□□□□ -1.31
TTC39C-203ENST00000540918 TTC32Q5I0X7 151 aa6.89□□□□□ -1.31
TTC39C-203ENST00000540918 FBN2P35556 2912 aa6.89□□□□□ -1.31
TTC39C-203ENST00000540918 IGHV1-58A0A0C4DH39 117 aa6.89□□□□□ -1.31
TTC39C-203ENST00000540918 TAX1BP3O14907 124 aa6.88□□□□□ -1.31
TTC39C-203ENST00000540918 KPRPQ5T749 579 aaPredicted RBP6.88□□□□□ -1.31
TTC39C-203ENST00000540918 PTH2Q96A98 100 aa6.88□□□□□ -1.31
TTC39C-203ENST00000540918 A0A096LNJ9 63 aa6.88□□□□□ -1.31
TTC39C-203ENST00000540918 CHCHD10Q8WYQ3 142 aaPredicted RBP6.88□□□□□ -1.31
TTC39C-203ENST00000540918 CLEC2BQ92478 149 aa6.88□□□□□ -1.31
TTC39C-203ENST00000540918 CNFNQ9BYD5 112 aa6.87□□□□□ -1.31
TTC39C-203ENST00000540918 APCP25054 2843 aa6.87□□□□□ -1.31
TTC39C-203ENST00000540918 WFDC2Q14508 124 aa6.87□□□□□ -1.31
TTC39C-203ENST00000540918 Q6ZTC4 211 aa6.87□□□□□ -1.31
TTC39C-203ENST00000540918 KRTAP24-1Q3LI83 254 aa6.87□□□□□ -1.31
TTC39C-203ENST00000540918 A0A096LNT2 108 aa6.86□□□□□ -1.31
TTC39C-203ENST00000540918 TRAV8-4A0A0B4J246 113 aa6.86□□□□□ -1.31
TTC39C-203ENST00000540918 K7EP34 96 aa6.86□□□□□ -1.31
TTC39C-203ENST00000540918 NTN5Q8WTR8 489 aaPredicted RBP6.86□□□□□ -1.31
TTC39C-203ENST00000540918 CARD19Q96LW7 228 aa6.86□□□□□ -1.31
TTC39C-203ENST00000540918 A0A0J9YXY3 114 aa6.86□□□□□ -1.31
TTC39C-203ENST00000540918 LYRM9A8MSI8 78 aa6.86□□□□□ -1.31
TTC39C-203ENST00000540918 SIVA1O15304 175 aa6.86□□□□□ -1.31
TTC39C-203ENST00000540918 MIFP14174 115 aa6.86□□□□□ -1.31
TTC39C-203ENST00000540918 TRBV6-4A0A1B0GX49 114 aa6.86□□□□□ -1.31
TTC39C-203ENST00000540918 UBE2BP63146 152 aa6.86□□□□□ -1.31
TTC39C-203ENST00000540918 IGLV4-60A0A075B6I1 120 aa6.85□□□□□ -1.31
TTC39C-203ENST00000540918 HIST1H4AP62805 103 aaKnown RBP6.85□□□□□ -1.31
TTC39C-203ENST00000540918 RNASE8Q8TDE3 154 aaKnown RBP6.85□□□□□ -1.31
TTC39C-203ENST00000540918 HIVEP1P15822 2718 aa6.85□□□□□ -1.31
TTC39C-203ENST00000540918 SMIM9A6NGZ8 99 aa6.85□□□□□ -1.31
TTC39C-203ENST00000540918 C10orf126Q8N4M7 172 aa6.85□□□□□ -1.31
TTC39C-203ENST00000540918 C16orf95Q9H693 158 aa6.85□□□□□ -1.31
TTC39C-203ENST00000540918 UBE2D4Q9Y2X8 147 aa6.84□□□□□ -1.31
TTC39C-203ENST00000540918 SPATA25Q9BR10 227 aa6.83□□□□□ -1.32
TTC39C-203ENST00000540918 TRBV6-5A0A0K0K1A5 114 aa6.83□□□□□ -1.32
TTC39C-203ENST00000540918 TEX48A0A1B0GUV7 120 aa6.83□□□□□ -1.32
TTC39C-203ENST00000540918 TAL2Q16559 108 aa6.83□□□□□ -1.32
TTC39C-203ENST00000540918 FSHBP01225 129 aa6.83□□□□□ -1.32
TTC39C-203ENST00000540918 Q8N2B8 174 aa6.83□□□□□ -1.32
TTC39C-203ENST00000540918 IGIPA6NJ69 53 aa6.82□□□□□ -1.32
TTC39C-203ENST00000540918 CRYBA4P53673 196 aa6.82□□□□□ -1.32
TTC39C-203ENST00000540918 CELA1Q9UNI1 258 aa6.82□□□□□ -1.32
TTC39C-203ENST00000540918 TMEM223A0PJW6 202 aa6.82□□□□□ -1.32
TTC39C-203ENST00000540918 UBE2D3P61077 147 aa6.82□□□□□ -1.32
TTC39C-203ENST00000540918 UBE2D2P62837 147 aa6.82□□□□□ -1.32
TTC39C-203ENST00000540918 COX6A2Q02221 97 aa6.82□□□□□ -1.32
TTC39C-203ENST00000540918 C9orf116Q5BN46 136 aaPredicted RBP6.82□□□□□ -1.32
TTC39C-203ENST00000540918 HRNRQ86YZ3 2850 aaPredicted RBP6.82□□□□□ -1.32
TTC39C-203ENST00000540918 NDUFA1O15239 70 aa6.82□□□□□ -1.32
TTC39C-203ENST00000540918 KRTAP1-3Q8IUG1 177 aa6.82□□□□□ -1.32
TTC39C-203ENST00000540918 TRAV13-2A0A0B4J235 113 aa6.82□□□□□ -1.32
TTC39C-203ENST00000540918 C2orf91Q6ZV80 131 aa6.82□□□□□ -1.32
TTC39C-203ENST00000540918 POM121L12Q8N7R1 296 aa6.82□□□□□ -1.32
TTC39C-203ENST00000540918 FHL2Q14192 279 aa6.81□□□□□ -1.32
TTC39C-203ENST00000540918 BSNQ9UPA5 3926 aa6.81□□□□□ -1.32
TTC39C-203ENST00000540918 HERV-K104P63124 156 aa6.81□□□□□ -1.32
TTC39C-203ENST00000540918 RMI2Q96E14 147 aa6.81□□□□□ -1.32
TTC39C-203ENST00000540918 SIGMAR1Q99720 223 aa6.81□□□□□ -1.32
TTC39C-203ENST00000540918 TRBV20-1A0A075B6N2 111 aa6.81□□□□□ -1.32
TTC39C-203ENST00000540918 BAALC-AS2P0C853 105 aa6.81□□□□□ -1.32
TTC39C-203ENST00000540918 PRSS47A8MTI9 375 aa6.8□□□□□ -1.32
TTC39C-203ENST00000540918 MRPL52Q86TS9 123 aaKnown RBP6.8□□□□□ -1.32
TTC39C-203ENST00000540918 A0A096LNI7 61 aa6.8□□□□□ -1.32
TTC39C-203ENST00000540918 LINC00242Q5T6M2 205 aa6.8□□□□□ -1.32
TTC39C-203ENST00000540918 LINC00959A0A1B0GUT2 108 aa6.8□□□□□ -1.32
TTC39C-203ENST00000540918 SLPIP03973 132 aa6.8□□□□□ -1.32
TTC39C-203ENST00000540918 TSPEAR-AS2P59090 65 aa6.8□□□□□ -1.32
TTC39C-203ENST00000540918 KIR2DL5BQ8NHK3 375 aa6.8□□□□□ -1.32
TTC39C-203ENST00000540918 COX8CQ7Z4L0 72 aa6.79□□□□□ -1.32
TTC39C-203ENST00000540918 Q8N3U1 123 aa6.79□□□□□ -1.32
TTC39C-203ENST00000540918 TMEM126AQ9H061 195 aa6.79□□□□□ -1.32
TTC39C-203ENST00000540918 CDC42SE2Q9NRR3 84 aa6.79□□□□□ -1.32
TTC39C-203ENST00000540918 HIGD1BQ9P298 99 aa6.79□□□□□ -1.32
TTC39C-203ENST00000540918 KIF25-AS1Q9Y6Z4 181 aa6.79□□□□□ -1.32
TTC39C-203ENST00000540918 HAMPP81172 84 aa6.79□□□□□ -1.32
TTC39C-203ENST00000540918 C11orf72Q8NBR9 251 aa6.79□□□□□ -1.32
TTC39C-203ENST00000540918 CHCHD7Q9BUK0 85 aa6.79□□□□□ -1.32
TTC39C-203ENST00000540918 PRR3P79522 188 aaKnown RBP6.79□□□□□ -1.32
TTC39C-203ENST00000540918 FHL3Q13643 280 aa6.78□□□□□ -1.32
TTC39C-203ENST00000540918 SPATA3Q8NHX4 192 aa6.78□□□□□ -1.32
TTC39C-203ENST00000540918 VPS13CQ709C8 3753 aa6.78□□□□□ -1.32
TTC39C-203ENST00000540918 LINC00315P59091 139 aa6.78□□□□□ -1.32
TTC39C-203ENST00000540918 F8W1H4 67 aa6.77□□□□□ -1.33
TTC39C-203ENST00000540918 KRTAP10-3P60369 221 aa6.77□□□□□ -1.33
TTC39C-203ENST00000540918 MIAQ16674 131 aa6.77□□□□□ -1.33
TTC39C-203ENST00000540918 C15orf53Q8NAA6 179 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms