RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 IGHG2P01859 326 aa5.57□□□□□ -1.52
CCDC60-204ENST00000539847 SAA4P35542 130 aa5.57□□□□□ -1.52
CCDC60-204ENST00000539847 LINC00643Q86TS7 51 aa5.57□□□□□ -1.52
CCDC60-204ENST00000539847 TMEM61Q8N0U2 210 aa5.57□□□□□ -1.52
CCDC60-204ENST00000539847 WFDC9Q8NEX5 89 aa5.57□□□□□ -1.52
CCDC60-204ENST00000539847 VSIG2Q96IQ7 327 aa5.57□□□□□ -1.52
CCDC60-204ENST00000539847 TIMM21Q9BVV7 248 aa5.57□□□□□ -1.52
CCDC60-204ENST00000539847 RHPN1-AS1Q9BWJ2 59 aa5.57□□□□□ -1.52
CCDC60-204ENST00000539847 DAZ1Q9NQZ3 744 aaKnown RBP5.57□□□□□ -1.52
CCDC60-204ENST00000539847 IGHV1OR15-1A0A075B7D0 117 aa5.56□□□□□ -1.52
CCDC60-204ENST00000539847 IGHV3-49A0A0A0MS15 119 aa5.56□□□□□ -1.52
CCDC60-204ENST00000539847 A0A0J9YXV3 536 aa5.56□□□□□ -1.52
CCDC60-204ENST00000539847 CIRBPQ14011 172 aaKnown RBP5.56□□□□□ -1.52
CCDC60-204ENST00000539847 MEIG1Q5JSS6 88 aa5.56□□□□□ -1.52
CCDC60-204ENST00000539847 FAM222AQ5U5X8 452 aa5.56□□□□□ -1.52
CCDC60-204ENST00000539847 DNAJC30Q96LL9 226 aa5.56□□□□□ -1.52
CCDC60-204ENST00000539847 NDUFA12Q9UI09 145 aa5.56□□□□□ -1.52
CCDC60-204ENST00000539847 IGLV5-45A0A087WSX0 123 aa5.55□□□□□ -1.52
CCDC60-204ENST00000539847 TRACP01848 142 aa5.55□□□□□ -1.52
CCDC60-204ENST00000539847 EMP1P54849 157 aa5.55□□□□□ -1.52
CCDC60-204ENST00000539847 RPS28P62857 69 aaKnown RBP5.55□□□□□ -1.52
CCDC60-204ENST00000539847 UNQ9165/PRO28630Q6UXU0 137 aa5.55□□□□□ -1.52
CCDC60-204ENST00000539847 FAM19A3Q7Z5A8 133 aa5.55□□□□□ -1.52
CCDC60-204ENST00000539847 DAND5Q8N907 189 aa5.55□□□□□ -1.52
CCDC60-204ENST00000539847 DCANP1Q8TF63 244 aa5.55□□□□□ -1.52
CCDC60-204ENST00000539847 DNAH3Q8TD57 4116 aa5.55□□□□□ -1.52
CCDC60-204ENST00000539847 RYR3Q15413 4870 aa5.54□□□□□ -1.52
CCDC60-204ENST00000539847 STAB2Q8WWQ8 2551 aa5.54□□□□□ -1.52
CCDC60-204ENST00000539847 H3BUX3 64 aa5.54□□□□□ -1.52
CCDC60-204ENST00000539847 NDUFA1O15239 70 aa5.54□□□□□ -1.52
CCDC60-204ENST00000539847 PRB2P02812 416 aaPredicted RBP5.54□□□□□ -1.52
CCDC60-204ENST00000539847 PRSS2P07478 247 aa5.54□□□□□ -1.52
CCDC60-204ENST00000539847 ZNF415Q09FC8 603 aa5.54□□□□□ -1.52
CCDC60-204ENST00000539847 LINC01587Q99440 93 aa5.54□□□□□ -1.52
CCDC60-204ENST00000539847 LINC00467Q9BRT7 94 aa5.54□□□□□ -1.52
CCDC60-204ENST00000539847 JPT2Q9H910 190 aa5.54□□□□□ -1.52
CCDC60-204ENST00000539847 TNFRSF18Q9Y5U5 241 aa5.54□□□□□ -1.52
CCDC60-204ENST00000539847 COL7A1Q02388 2944 aa5.53□□□□□ -1.52
CCDC60-204ENST00000539847 A0A1B0GX51 115 aa5.53□□□□□ -1.52
CCDC60-204ENST00000539847 A6NDX4 124 aa5.53□□□□□ -1.52
CCDC60-204ENST00000539847 A8MTW9 85 aa5.53□□□□□ -1.52
CCDC60-204ENST00000539847 COX7A2LO14548 114 aa5.53□□□□□ -1.52
CCDC60-204ENST00000539847 UQCRQO14949 82 aa5.53□□□□□ -1.52
CCDC60-204ENST00000539847 SNRPD3P62318 126 aaKnown RBP5.53□□□□□ -1.52
CCDC60-204ENST00000539847 HERV-K104P63124 156 aa5.53□□□□□ -1.52
CCDC60-204ENST00000539847 ZNF56Q15929 161 aa5.53□□□□□ -1.52
CCDC60-204ENST00000539847 ADAMTSL4-AS1Q5T5F5 129 aa5.53□□□□□ -1.52
CCDC60-204ENST00000539847 C5orf38Q86SI9 138 aa5.53□□□□□ -1.52
CCDC60-204ENST00000539847 C3orf22Q8N5N4 141 aa5.53□□□□□ -1.52
CCDC60-204ENST00000539847 FAM104AQ969W3 186 aa5.53□□□□□ -1.52
CCDC60-204ENST00000539847 LINC00526Q96FQ7 95 aa5.53□□□□□ -1.52
CCDC60-204ENST00000539847 OVOL2Q9BRP0 275 aa5.53□□□□□ -1.52
CCDC60-204ENST00000539847 SPXQ9BT56 116 aa5.53□□□□□ -1.52
CCDC60-204ENST00000539847 ZNF702PQ9H963 129 aa5.53□□□□□ -1.52
CCDC60-204ENST00000539847 TRAV12-3A0A0B4J271 114 aa5.52□□□□□ -1.53
CCDC60-204ENST00000539847 IGLV5-39A0A0G2JS06 123 aa5.52□□□□□ -1.53
CCDC60-204ENST00000539847 F6UB75 175 aa5.52□□□□□ -1.53
CCDC60-204ENST00000539847 H7C2G1 150 aa5.52□□□□□ -1.53
CCDC60-204ENST00000539847 INAFM2P0DMQ5 153 aa5.52□□□□□ -1.53
CCDC60-204ENST00000539847 CD28P10747 220 aa5.52□□□□□ -1.53
CCDC60-204ENST00000539847 EGFEM1PQ0D2K5 195 aa5.52□□□□□ -1.53
CCDC60-204ENST00000539847 XP32Q5T750 250 aa5.52□□□□□ -1.53
CCDC60-204ENST00000539847 SMIM20Q8N5G0 67 aa5.52□□□□□ -1.53
CCDC60-204ENST00000539847 OPRPNQ99935 248 aaPredicted RBP5.52□□□□□ -1.53
CCDC60-204ENST00000539847 B9D2Q9BPU9 175 aa5.52□□□□□ -1.53
CCDC60-204ENST00000539847 K7EIL1 84 aa5.51□□□□□ -1.53
CCDC60-204ENST00000539847 K7EQG2 157 aa5.51□□□□□ -1.53
CCDC60-204ENST00000539847 TRBV12-3P01733 135 aa5.51□□□□□ -1.53
CCDC60-204ENST00000539847 IL17DQ8TAD2 202 aa5.51□□□□□ -1.53
CCDC60-204ENST00000539847 DUX3Q96PT4 197 aa5.51□□□□□ -1.53
CCDC60-204ENST00000539847 DNAH9Q9NYC9 4486 aa5.51□□□□□ -1.53
CCDC60-204ENST00000539847 VPREB1P12018 145 aa5.5□□□□□ -1.53
CCDC60-204ENST00000539847 HERVK_113P63121 156 aa5.5□□□□□ -1.53
CCDC60-204ENST00000539847 LY6EQ16553 131 aa5.5□□□□□ -1.53
CCDC60-204ENST00000539847 LINC00308Q8TCZ7 52 aa5.5□□□□□ -1.53
CCDC60-204ENST00000539847 CHCHD7Q9BUK0 85 aa5.5□□□□□ -1.53
CCDC60-204ENST00000539847 UBE2D4Q9Y2X8 147 aa5.5□□□□□ -1.53
CCDC60-204ENST00000539847 CSDC2Q9Y534 153 aaKnown RBP5.5□□□□□ -1.53
CCDC60-204ENST00000539847 C3orf84H3BNL1 204 aa5.49□□□□□ -1.53
CCDC60-204ENST00000539847 CRYGAP11844 174 aa5.49□□□□□ -1.53
CCDC60-204ENST00000539847 FAM74A4Q5TZK3 123 aa5.49□□□□□ -1.53
CCDC60-204ENST00000539847 TRAV13-2A0A0B4J235 113 aa5.48□□□□□ -1.53
CCDC60-204ENST00000539847 ATOX1O00244 68 aa5.48□□□□□ -1.53
CCDC60-204ENST00000539847 IGHV3-53P01767 116 aa5.48□□□□□ -1.53
CCDC60-204ENST00000539847 BAALC-AS2P0C853 105 aa5.48□□□□□ -1.53
CCDC60-204ENST00000539847 COX7CP15954 63 aa5.48□□□□□ -1.53
CCDC60-204ENST00000539847 DEFB1P60022 68 aa5.48□□□□□ -1.53
CCDC60-204ENST00000539847 HIST1H4AP62805 103 aaKnown RBP5.48□□□□□ -1.53
CCDC60-204ENST00000539847 CLEC2BQ92478 149 aa5.48□□□□□ -1.53
CCDC60-204ENST00000539847 CHCHD5Q9BSY4 110 aa5.48□□□□□ -1.53
CCDC60-204ENST00000539847 TRAV8-3A0A0A6YYJ7 113 aa5.47□□□□□ -1.53
CCDC60-204ENST00000539847 H0YGX0 51 aa5.47□□□□□ -1.53
CCDC60-204ENST00000539847 RPL28P46779 137 aaKnown RBP5.47□□□□□ -1.53
CCDC60-204ENST00000539847 MUC4Q99102 2169 aa5.46□□□□□ -1.53
CCDC60-204ENST00000539847 IGHV3-64A0A075B6Q5 118 aa5.46□□□□□ -1.54
CCDC60-204ENST00000539847 FAM236AA0A1B0GUQ0 79 aa5.46□□□□□ -1.54
CCDC60-204ENST00000539847 FAM236BA0A1B0GV22 79 aa5.46□□□□□ -1.54
CCDC60-204ENST00000539847 RS1O15537 224 aa5.46□□□□□ -1.54
CCDC60-204ENST00000539847 PSMB8P28062 276 aa5.46□□□□□ -1.54
CCDC60-204ENST00000539847 KRTAP10-11P60412 298 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms