RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 FAM236BA0A1B0GV22 79 aa9.34□□□□□ -0.91
UBE3B-209ENST00000539584 IGKV2D-28P01615 120 aa9.34□□□□□ -0.91
UBE3B-209ENST00000539584 C5orf38Q86SI9 138 aa9.34□□□□□ -0.91
UBE3B-209ENST00000539584 LINC00337Q8N6G1 96 aa9.34□□□□□ -0.91
UBE3B-209ENST00000539584 COL12A1Q99715 3063 aa9.34□□□□□ -0.91
UBE3B-209ENST00000539584 GIG44P09565 113 aaPredicted RBP9.34□□□□□ -0.91
UBE3B-209ENST00000539584 LINC00158P58513 81 aa9.34□□□□□ -0.91
UBE3B-209ENST00000539584 SPTBN4Q9H254 2564 aa9.34□□□□□ -0.91
UBE3B-209ENST00000539584 CHD8Q9HCK8 2581 aa9.33□□□□□ -0.92
UBE3B-209ENST00000539584 CR1P17927 2039 aa9.33□□□□□ -0.92
UBE3B-209ENST00000539584 LINC01561Q8N1V8 128 aa9.33□□□□□ -0.92
UBE3B-209ENST00000539584 SMCR5Q8TEV8 140 aa9.33□□□□□ -0.92
UBE3B-209ENST00000539584 OBSCN-AS1Q96MR7 158 aa9.32□□□□□ -0.92
UBE3B-209ENST00000539584 CSNK1G2-AS1Q8NCQ2 148 aa9.32□□□□□ -0.92
UBE3B-209ENST00000539584 SMIM11BQ8TCY0 68 aa9.32□□□□□ -0.92
UBE3B-209ENST00000539584 TOMM7Q9P0U1 55 aa9.32□□□□□ -0.92
UBE3B-209ENST00000539584 DNAJC9-AS1A6NH13 148 aa9.31□□□□□ -0.92
UBE3B-209ENST00000539584 UQCRQO14949 82 aa9.31□□□□□ -0.92
UBE3B-209ENST00000539584 CCL18P55774 89 aa9.31□□□□□ -0.92
UBE3B-209ENST00000539584 C11orf44Q8N8P7 122 aa9.31□□□□□ -0.92
UBE3B-209ENST00000539584 A0A1B0GX51 115 aa9.31□□□□□ -0.92
UBE3B-209ENST00000539584 IGLV1-51P01701 117 aa9.31□□□□□ -0.92
UBE3B-209ENST00000539584 FHL2Q14192 279 aa9.31□□□□□ -0.92
UBE3B-209ENST00000539584 GAGE2AQ6NT46 116 aa9.31□□□□□ -0.92
UBE3B-209ENST00000539584 C3orf22Q8N5N4 141 aa9.3□□□□□ -0.92
UBE3B-209ENST00000539584 C16orf95Q9H693 158 aa9.3□□□□□ -0.92
UBE3B-209ENST00000539584 PKD1L2Q7Z442 2459 aa9.3□□□□□ -0.92
UBE3B-209ENST00000539584 LY6G6DO95868 133 aa9.29□□□□□ -0.92
UBE3B-209ENST00000539584 Q9HAA7 133 aa9.29□□□□□ -0.92
UBE3B-209ENST00000539584 C19orf73Q9NVV2 129 aa9.29□□□□□ -0.92
UBE3B-209ENST00000539584 IGLV4-60A0A075B6I1 120 aa9.29□□□□□ -0.92
UBE3B-209ENST00000539584 A0A1B0GUV1 79 aa9.29□□□□□ -0.92
UBE3B-209ENST00000539584 KIR2DL5BQ8NHK3 375 aa9.29□□□□□ -0.92
UBE3B-209ENST00000539584 LOC100131303A0A0U1RQF7 123 aa9.28□□□□□ -0.92
UBE3B-209ENST00000539584 A0A1W2PRX2 142 aa9.28□□□□□ -0.92
UBE3B-209ENST00000539584 KLK5Q9Y337 293 aaPredicted RBP9.28□□□□□ -0.92
UBE3B-209ENST00000539584 LINC00959A0A1B0GUT2 108 aa9.27□□□□□ -0.92
UBE3B-209ENST00000539584 ATOX1O00244 68 aa9.27□□□□□ -0.92
UBE3B-209ENST00000539584 Q8IZM0 81 aa9.27□□□□□ -0.92
UBE3B-209ENST00000539584 LINC00526Q96FQ7 95 aa9.27□□□□□ -0.92
UBE3B-209ENST00000539584 ANKRD17O75179 2603 aaKnown RBP9.27□□□□□ -0.93
UBE3B-209ENST00000539584 USP9YO00507 2555 aaPredicted RBP9.27□□□□□ -0.93
UBE3B-209ENST00000539584 A0A087WYN8 130 aa9.27□□□□□ -0.93
UBE3B-209ENST00000539584 PAX4O43316 350 aa9.27□□□□□ -0.93
UBE3B-209ENST00000539584 KRTAP10-9P60411 292 aa9.27□□□□□ -0.93
UBE3B-209ENST00000539584 HIST1H4AP62805 103 aaKnown RBP9.27□□□□□ -0.93
UBE3B-209ENST00000539584 SS18Q15532 418 aa9.27□□□□□ -0.93
UBE3B-209ENST00000539584 C6orf226Q5I0X4 101 aa9.27□□□□□ -0.93
UBE3B-209ENST00000539584 KRTAP1-3Q8IUG1 177 aa9.27□□□□□ -0.93
UBE3B-209ENST00000539584 USP9XQ93008 2570 aaPredicted RBP9.27□□□□□ -0.93
UBE3B-209ENST00000539584 Q6JHZ5 121 aa9.26□□□□□ -0.93
UBE3B-209ENST00000539584 LINC00612Q8N6U2 182 aa9.26□□□□□ -0.93
UBE3B-209ENST00000539584 CELSR2Q9HCU4 2923 aa9.25□□□□□ -0.93
UBE3B-209ENST00000539584 RPL35AP18077 110 aaKnown RBP9.25□□□□□ -0.93
UBE3B-209ENST00000539584 COX17Q14061 63 aa9.25□□□□□ -0.93
UBE3B-209ENST00000539584 ORMDL1Q9P0S3 153 aa9.25□□□□□ -0.93
UBE3B-209ENST00000539584 CRYBG3Q68DQ2 2970 aa9.24□□□□□ -0.93
UBE3B-209ENST00000539584 IGKV3OR2-268A0A0C4DH90 116 aa9.24□□□□□ -0.93
UBE3B-209ENST00000539584 NDUFC2O95298 119 aa9.24□□□□□ -0.93
UBE3B-209ENST00000539584 COX7CP15954 63 aa9.24□□□□□ -0.93
UBE3B-209ENST00000539584 C9orf153Q5TBE3 101 aa9.24□□□□□ -0.93
UBE3B-209ENST00000539584 LINC00167Q96N53 147 aa9.24□□□□□ -0.93
UBE3B-209ENST00000539584 JMJD7-PLA2G4BH0Y9G9 81 aa9.24□□□□□ -0.93
UBE3B-209ENST00000539584 LECT2O14960 151 aa9.24□□□□□ -0.93
UBE3B-209ENST00000539584 RNASE1P07998 156 aaKnown RBP9.24□□□□□ -0.93
UBE3B-209ENST00000539584 PFN2P35080 140 aa9.24□□□□□ -0.93
UBE3B-209ENST00000539584 LINC01006Q8NI28 216 aa9.24□□□□□ -0.93
UBE3B-209ENST00000539584 S100A7L2Q5SY68 101 aa9.23□□□□□ -0.93
UBE3B-209ENST00000539584 LCE2DQ5TA82 110 aaPredicted RBP9.23□□□□□ -0.93
UBE3B-209ENST00000539584 SMIM20Q8N5G0 67 aa9.23□□□□□ -0.93
UBE3B-209ENST00000539584 OR13C6PQ8NH95 151 aa9.23□□□□□ -0.93
UBE3B-209ENST00000539584 ESM1Q9NQ30 184 aa9.23□□□□□ -0.93
UBE3B-209ENST00000539584 CFAP46Q8IYW2 2715 aa9.22□□□□□ -0.93
UBE3B-209ENST00000539584 SMIM9A6NGZ8 99 aa9.22□□□□□ -0.93
UBE3B-209ENST00000539584 CRYGAP11844 174 aa9.22□□□□□ -0.93
UBE3B-209ENST00000539584 MUC7Q8TAX7 377 aa9.22□□□□□ -0.93
UBE3B-209ENST00000539584 C14orf132Q9NPU4 83 aa9.22□□□□□ -0.93
UBE3B-209ENST00000539584 TMEM256-PLSCR3K7ERE1 68 aa9.21□□□□□ -0.94
UBE3B-209ENST00000539584 RPL18AQ02543 176 aaKnown RBP9.2□□□□□ -0.94
UBE3B-209ENST00000539584 WFDC10AQ9H1F0 79 aa9.2□□□□□ -0.94
UBE3B-209ENST00000539584 PRO0255Q9UI72 69 aa9.2□□□□□ -0.94
UBE3B-209ENST00000539584 MXRA5Q9NR99 2828 aa9.2□□□□□ -0.94
UBE3B-209ENST00000539584 CCKP06307 115 aa9.19□□□□□ -0.94
UBE3B-209ENST00000539584 GYPEP15421 78 aa9.19□□□□□ -0.94
UBE3B-209ENST00000539584 ATP5EP2Q5VTU8 51 aa9.19□□□□□ -0.94
UBE3B-209ENST00000539584 ACACBO00763 2458 aa9.19□□□□□ -0.94
UBE3B-209ENST00000539584 FLNCQ14315 2725 aa9.19□□□□□ -0.94
UBE3B-209ENST00000539584 IGHV4-28A0A0C4DH34 117 aa9.19□□□□□ -0.94
UBE3B-209ENST00000539584 LINC00846Q9NV44 126 aa9.19□□□□□ -0.94
UBE3B-209ENST00000539584 XCL1P47992 114 aa9.18□□□□□ -0.94
UBE3B-209ENST00000539584 CD164L2Q6UWJ8 174 aa9.18□□□□□ -0.94
UBE3B-209ENST00000539584 ZNF843Q8N446 348 aa9.18□□□□□ -0.94
UBE3B-209ENST00000539584 C2orf48Q96LS8 159 aa9.18□□□□□ -0.94
UBE3B-209ENST00000539584 Q8N814 137 aa9.17□□□□□ -0.94
UBE3B-209ENST00000539584 MAP1AP78559 2803 aaPredicted RBP9.17□□□□□ -0.94
UBE3B-209ENST00000539584 CACNA1AO00555 2505 aa9.17□□□□□ -0.94
UBE3B-209ENST00000539584 DEFB130BP0DP73 79 aa9.17□□□□□ -0.94
UBE3B-209ENST00000539584 DEFB130AP0DP74 79 aa9.17□□□□□ -0.94
UBE3B-209ENST00000539584 C9orf129Q5T035 196 aaKnown RBP9.17□□□□□ -0.94
UBE3B-209ENST00000539584 FBN2P35556 2912 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms