RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 GAGE7O76087 117 aa11.37□□□□□ -0.59
CHMP1A-202ENST00000535997 GAGE12FP0CL80 117 aa11.37□□□□□ -0.59
CHMP1A-202ENST00000535997 GAGE12GP0CL81 117 aa11.37□□□□□ -0.59
CHMP1A-202ENST00000535997 GAGE12IP0CL82 117 aa11.37□□□□□ -0.59
CHMP1A-202ENST00000535997 HERV-K104P63124 156 aa11.37□□□□□ -0.59
CHMP1A-202ENST00000535997 C2orf82Q6UX34 121 aa11.37□□□□□ -0.59
CHMP1A-202ENST00000535997 PRIMA1Q86XR5 153 aa11.37□□□□□ -0.59
CHMP1A-202ENST00000535997 TEX49A0A1B0GTD5 131 aa11.36□□□□□ -0.59
CHMP1A-202ENST00000535997 KRTAP1-1Q07627 177 aa11.36□□□□□ -0.59
CHMP1A-202ENST00000535997 RPL35AP18077 110 aaKnown RBP11.35□□□□□ -0.59
CHMP1A-202ENST00000535997 CLEC2BQ92478 149 aa11.35□□□□□ -0.59
CHMP1A-202ENST00000535997 PPDPFQ9H3Y8 114 aa11.35□□□□□ -0.59
CHMP1A-202ENST00000535997 CKS1BP61024 79 aa11.35□□□□□ -0.59
CHMP1A-202ENST00000535997 WFDC10AQ9H1F0 79 aa11.35□□□□□ -0.59
CHMP1A-202ENST00000535997 ACANP16112 2415 aa11.34□□□□□ -0.59
CHMP1A-202ENST00000535997 MEIG1Q5JSS6 88 aa11.34□□□□□ -0.59
CHMP1A-202ENST00000535997 UBE2WQ96B02 151 aa11.34□□□□□ -0.59
CHMP1A-202ENST00000535997 TRGV4A0A0C4DH28 118 aa11.33□□□□□ -0.6
CHMP1A-202ENST00000535997 A0A0U1RRA0 63 aa11.33□□□□□ -0.6
CHMP1A-202ENST00000535997 LOC100131303A0A0U1RQF7 123 aa11.32□□□□□ -0.6
CHMP1A-202ENST00000535997 SOSTDC1Q6X4U4 206 aa11.32□□□□□ -0.6
CHMP1A-202ENST00000535997 MTORP42345 2549 aa11.32□□□□□ -0.6
CHMP1A-202ENST00000535997 SHISA2Q6UWI4 295 aa11.32□□□□□ -0.6
CHMP1A-202ENST00000535997 PDZD2O15018 2839 aa11.31□□□□□ -0.6
CHMP1A-202ENST00000535997 FHL2Q14192 279 aa11.31□□□□□ -0.6
CHMP1A-202ENST00000535997 ANK3Q12955 4377 aaKnown RBP11.3□□□□□ -0.6
CHMP1A-202ENST00000535997 TRBV6-8A0A0A6YYG3 113 aa11.3□□□□□ -0.6
CHMP1A-202ENST00000535997 TRAV8-4A0A0B4J246 113 aa11.3□□□□□ -0.6
CHMP1A-202ENST00000535997 COX7A2LO14548 114 aa11.3□□□□□ -0.6
CHMP1A-202ENST00000535997 HIST2H2BCQ6DN03 193 aa11.29□□□□□ -0.6
CHMP1A-202ENST00000535997 TENM4Q6N022 2769 aa11.29□□□□□ -0.6
CHMP1A-202ENST00000535997 HILS1P60008 231 aa11.29□□□□□ -0.6
CHMP1A-202ENST00000535997 DEFB121Q5J5C9 76 aa11.29□□□□□ -0.6
CHMP1A-202ENST00000535997 PLA2G2AP14555 144 aa11.28□□□□□ -0.6
CHMP1A-202ENST00000535997 CITED1Q99966 193 aa11.28□□□□□ -0.6
CHMP1A-202ENST00000535997 GAGE6Q13070 117 aa11.28□□□□□ -0.6
CHMP1A-202ENST00000535997 COX7B2Q8TF08 81 aa11.28□□□□□ -0.6
CHMP1A-202ENST00000535997 PF4P02776 101 aa11.27□□□□□ -0.61
CHMP1A-202ENST00000535997 SNCGO76070 127 aa11.26□□□□□ -0.61
CHMP1A-202ENST00000535997 ITPR2Q14571 2701 aa11.26□□□□□ -0.61
CHMP1A-202ENST00000535997 IGHV3OR16-9A0A0B4J2B5 98 aa11.26□□□□□ -0.61
CHMP1A-202ENST00000535997 IGLV4-60A0A075B6I1 120 aa11.25□□□□□ -0.61
CHMP1A-202ENST00000535997 KIR2DL5BQ8NHK3 375 aa11.25□□□□□ -0.61
CHMP1A-202ENST00000535997 CHCHD5Q9BSY4 110 aa11.25□□□□□ -0.61
CHMP1A-202ENST00000535997 FAM240AA0A1B0GVK7 77 aa11.25□□□□□ -0.61
CHMP1A-202ENST00000535997 TRAV13-2A0A0B4J235 113 aa11.24□□□□□ -0.61
CHMP1A-202ENST00000535997 TRACP01848 142 aa11.24□□□□□ -0.61
CHMP1A-202ENST00000535997 GAGE2BQ13066 116 aa11.24□□□□□ -0.61
CHMP1A-202ENST00000535997 GAGE2EQ4V326 116 aa11.24□□□□□ -0.61
CHMP1A-202ENST00000535997 GAGE2DQ9UEU5 116 aa11.24□□□□□ -0.61
CHMP1A-202ENST00000535997 A0A087WZ39 114 aa11.23□□□□□ -0.61
CHMP1A-202ENST00000535997 IGKV3OR2-268A0A0C4DH90 116 aa11.23□□□□□ -0.61
CHMP1A-202ENST00000535997 FAM222AQ5U5X8 452 aa11.23□□□□□ -0.61
CHMP1A-202ENST00000535997 LINC00612Q8N6U2 182 aa11.23□□□□□ -0.61
CHMP1A-202ENST00000535997 TOMM7Q9P0U1 55 aa11.23□□□□□ -0.61
CHMP1A-202ENST00000535997 MRPL23Q16540 153 aaKnown RBP11.22□□□□□ -0.61
CHMP1A-202ENST00000535997 MIR7-3HGQ8N6C7 128 aa11.22□□□□□ -0.61
CHMP1A-202ENST00000535997 CRLF1O75462 422 aa11.21□□□□□ -0.61
CHMP1A-202ENST00000535997 DEFB130BP0DP73 79 aa11.21□□□□□ -0.61
CHMP1A-202ENST00000535997 DEFB130AP0DP74 79 aa11.21□□□□□ -0.61
CHMP1A-202ENST00000535997 RPL28P46779 137 aaKnown RBP11.21□□□□□ -0.62
CHMP1A-202ENST00000535997 Q6Q795 121 aa11.21□□□□□ -0.62
CHMP1A-202ENST00000535997 IBA57-AS1B1ANH7 110 aa11.2□□□□□ -0.62
CHMP1A-202ENST00000535997 C15orf53Q8NAA6 179 aa11.2□□□□□ -0.62
CHMP1A-202ENST00000535997 SND1-IT1Q9HBX3 110 aa11.2□□□□□ -0.62
CHMP1A-202ENST00000535997 LINC00959A0A1B0GUT2 108 aa11.19□□□□□ -0.62
CHMP1A-202ENST00000535997 LINC00158P58513 81 aa11.19□□□□□ -0.62
CHMP1A-202ENST00000535997 CRPP02741 224 aa11.19□□□□□ -0.62
CHMP1A-202ENST00000535997 ANAPC13Q9BS18 74 aa11.19□□□□□ -0.62
CHMP1A-202ENST00000535997 A0A1B0GUV1 79 aa11.18□□□□□ -0.62
CHMP1A-202ENST00000535997 SMIM9A6NGZ8 99 aa11.18□□□□□ -0.62
CHMP1A-202ENST00000535997 LINC00482Q8N8I6 264 aa11.18□□□□□ -0.62
CHMP1A-202ENST00000535997 IGKV2-28A0A075B6P5 120 aa11.18□□□□□ -0.62
CHMP1A-202ENST00000535997 IGKV2D-28P01615 120 aa11.18□□□□□ -0.62
CHMP1A-202ENST00000535997 ACYP1P07311 99 aa11.18□□□□□ -0.62
CHMP1A-202ENST00000535997 GYPEP15421 78 aa11.18□□□□□ -0.62
CHMP1A-202ENST00000535997 C5orf38Q86SI9 138 aa11.18□□□□□ -0.62
CHMP1A-202ENST00000535997 LINC00337Q8N6G1 96 aa11.18□□□□□ -0.62
CHMP1A-202ENST00000535997 HIVEP2P31629 2446 aa11.17□□□□□ -0.62
CHMP1A-202ENST00000535997 TRAV26-1A0A087WT03 109 aa11.17□□□□□ -0.62
CHMP1A-202ENST00000535997 BAALC-AS2P0C853 105 aa11.17□□□□□ -0.62
CHMP1A-202ENST00000535997 FN1P02751 2386 aaKnown RBP11.17□□□□□ -0.62
CHMP1A-202ENST00000535997 KRTAP10-3P60369 221 aa11.16□□□□□ -0.62
CHMP1A-202ENST00000535997 CCL18P55774 89 aa11.16□□□□□ -0.62
CHMP1A-202ENST00000535997 FAM218AQ96MZ4 157 aa11.16□□□□□ -0.62
CHMP1A-202ENST00000535997 PRO0255Q9UI72 69 aa11.16□□□□□ -0.62
CHMP1A-202ENST00000535997 X6R8D5 127 aa11.16□□□□□ -0.62
CHMP1A-202ENST00000535997 TTC32Q5I0X7 151 aa11.15□□□□□ -0.62
CHMP1A-202ENST00000535997 C6orf226Q5I0X4 101 aa11.15□□□□□ -0.62
CHMP1A-202ENST00000535997 UNC79Q9P2D8 2635 aa11.15□□□□□ -0.62
CHMP1A-202ENST00000535997 J3QKU1 62 aa11.14□□□□□ -0.63
CHMP1A-202ENST00000535997 NDUFV3P56181 108 aaKnown RBP11.14□□□□□ -0.63
CHMP1A-202ENST00000535997 SS18Q15532 418 aa11.14□□□□□ -0.63
CHMP1A-202ENST00000535997 HELZ2Q9BYK8 2649 aaKnown RBP11.13□□□□□ -0.63
CHMP1A-202ENST00000535997 H0YGX0 51 aa11.12□□□□□ -0.63
CHMP1A-202ENST00000535997 PFN2P35080 140 aa11.12□□□□□ -0.63
CHMP1A-202ENST00000535997 NHLRC4P0CG21 123 aaPredicted RBP11.12□□□□□ -0.63
CHMP1A-202ENST00000535997 LINC01561Q8N1V8 128 aa11.12□□□□□ -0.63
CHMP1A-202ENST00000535997 SMIM11BQ8TCY0 68 aa11.12□□□□□ -0.63
CHMP1A-202ENST00000535997 GCN1Q92616 2671 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms