RNA–Protein interactions for RNA: ENST00000533834.1

RNPC3-209, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

TSL 1 (best)

Gene RNPC3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-209ENST00000533834 SORL1Q92673 2214 aa4.94□□□□□ -1.62
RNPC3-209ENST00000533834 APOMO95445 188 aa4.94□□□□□ -1.62
RNPC3-209ENST00000533834 SMR3AQ99954 134 aa4.94□□□□□ -1.62
RNPC3-209ENST00000533834 RPL24P83731 157 aaKnown RBP4.94□□□□□ -1.62
RNPC3-209ENST00000533834 ICOSQ9Y6W8 199 aa4.94□□□□□ -1.62
RNPC3-209ENST00000533834 IFITM1P13164 125 aa4.93□□□□□ -1.62
RNPC3-209ENST00000533834 OBSCN-AS1Q96MR7 158 aa4.93□□□□□ -1.62
RNPC3-209ENST00000533834 LY6G6DO95868 133 aa4.93□□□□□ -1.62
RNPC3-209ENST00000533834 HERVK_113P63121 156 aa4.93□□□□□ -1.62
RNPC3-209ENST00000533834 SRSF9Q13242 221 aaKnown RBP eCLIP4.93□□□□□ -1.62
RNPC3-209ENST00000533834 COTL1Q14019 142 aa4.93□□□□□ -1.62
RNPC3-209ENST00000533834 STHQ8IWL8 128 aa4.93□□□□□ -1.62
RNPC3-209ENST00000533834 FAM218AQ96MZ4 157 aa4.93□□□□□ -1.62
RNPC3-209ENST00000533834 NOP10Q9NPE3 64 aaKnown RBP4.93□□□□□ -1.62
RNPC3-209ENST00000533834 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.93□□□□□ -1.62
RNPC3-209ENST00000533834 PSMB2P49721 201 aa4.93□□□□□ -1.62
RNPC3-209ENST00000533834 TEX29Q8N6K0 151 aa4.93□□□□□ -1.62
RNPC3-209ENST00000533834 DYNLRB2Q8TF09 96 aa4.93□□□□□ -1.62
RNPC3-209ENST00000533834 LINC01620Q4KN68 170 aa4.92□□□□□ -1.62
RNPC3-209ENST00000533834 Q8NDZ9 215 aa4.92□□□□□ -1.62
RNPC3-209ENST00000533834 PKD1L1Q8TDX9 2849 aa4.92□□□□□ -1.62
RNPC3-209ENST00000533834 NANOS2P60321 138 aaKnown RBP4.92□□□□□ -1.62
RNPC3-209ENST00000533834 KIAA0087Q14695 138 aa4.92□□□□□ -1.62
RNPC3-209ENST00000533834 VPS25Q9BRG1 176 aa4.92□□□□□ -1.62
RNPC3-209ENST00000533834 TRGV1A0A0A0MS02 117 aa4.92□□□□□ -1.62
RNPC3-209ENST00000533834 TRBV6-8A0A0A6YYG3 113 aa4.92□□□□□ -1.62
RNPC3-209ENST00000533834 TRBV10-2A0A0K0K1G8 114 aa4.92□□□□□ -1.62
RNPC3-209ENST00000533834 PPDPFLQ8WWR9 84 aa4.92□□□□□ -1.62
RNPC3-209ENST00000533834 A0A087WZ39 114 aa4.91□□□□□ -1.62
RNPC3-209ENST00000533834 A0A1W2PRX2 142 aa4.91□□□□□ -1.62
RNPC3-209ENST00000533834 NHLRC4P0CG21 123 aaPredicted RBP4.91□□□□□ -1.62
RNPC3-209ENST00000533834 HTN1P15515 57 aa4.91□□□□□ -1.62
RNPC3-209ENST00000533834 SS18Q15532 418 aa4.91□□□□□ -1.62
RNPC3-209ENST00000533834 NAV2Q8IVL1 2488 aa4.91□□□□□ -1.62
RNPC3-209ENST00000533834 A0A1B0GUV1 79 aa4.91□□□□□ -1.62
RNPC3-209ENST00000533834 SLC25A20O43772 301 aa4.91□□□□□ -1.62
RNPC3-209ENST00000533834 MT-ATP8P03928 68 aa4.91□□□□□ -1.62
RNPC3-209ENST00000533834 SFTA2Q6UW10 78 aa4.91□□□□□ -1.62
RNPC3-209ENST00000533834 C11orf44Q8N8P7 122 aa4.91□□□□□ -1.62
RNPC3-209ENST00000533834 DAND5Q8N907 189 aa4.91□□□□□ -1.62
RNPC3-209ENST00000533834 CMC4P56277 68 aaPredicted RBP4.91□□□□□ -1.62
RNPC3-209ENST00000533834 LINC01561Q8N1V8 128 aa4.9□□□□□ -1.62
RNPC3-209ENST00000533834 LINC00337Q8N6G1 96 aa4.9□□□□□ -1.62
RNPC3-209ENST00000533834 ZNF418Q8TF45 676 aaPredicted RBP4.9□□□□□ -1.62
RNPC3-209ENST00000533834 LINC00167Q96N53 147 aa4.9□□□□□ -1.62
RNPC3-209ENST00000533834 ERG28Q9UKR5 140 aa4.9□□□□□ -1.62
RNPC3-209ENST00000533834 Q8NAQ8 132 aa4.9□□□□□ -1.63
RNPC3-209ENST00000533834 TRAV8-4A0A0B4J246 113 aa4.9□□□□□ -1.63
RNPC3-209ENST00000533834 Q9H8V8 135 aa4.9□□□□□ -1.63
RNPC3-209ENST00000533834 CRLF1O75462 422 aa4.89□□□□□ -1.63
RNPC3-209ENST00000533834 COL7A1Q02388 2944 aa4.89□□□□□ -1.63
RNPC3-209ENST00000533834 RPL36AP83881 106 aaKnown RBP4.89□□□□□ -1.63
RNPC3-209ENST00000533834 KRTAP26-1Q6PEX3 210 aa4.89□□□□□ -1.63
RNPC3-209ENST00000533834 CLEC2BQ92478 149 aa4.89□□□□□ -1.63
RNPC3-209ENST00000533834 RPL36ALQ969Q0 106 aaKnown RBP4.89□□□□□ -1.63
RNPC3-209ENST00000533834 HELZ2Q9BYK8 2649 aaKnown RBP4.89□□□□□ -1.63
RNPC3-209ENST00000533834 TEX49A0A1B0GTD5 131 aa4.88□□□□□ -1.63
RNPC3-209ENST00000533834 GAGE12JA6NER3 117 aa4.88□□□□□ -1.63
RNPC3-209ENST00000533834 RPL28P46779 137 aaKnown RBP4.88□□□□□ -1.63
RNPC3-209ENST00000533834 GAGE4Q13068 117 aa4.88□□□□□ -1.63
RNPC3-209ENST00000533834 GAGE5Q13069 117 aa4.88□□□□□ -1.63
RNPC3-209ENST00000533834 C9orf129Q5T035 196 aaKnown RBP4.88□□□□□ -1.63
RNPC3-209ENST00000533834 IGHV4-28A0A0C4DH34 117 aa4.88□□□□□ -1.63
RNPC3-209ENST00000533834 LINC00959A0A1B0GUT2 108 aa4.88□□□□□ -1.63
RNPC3-209ENST00000533834 FAM240AA0A1B0GVK7 77 aa4.88□□□□□ -1.63
RNPC3-209ENST00000533834 H3BT86 120 aa4.88□□□□□ -1.63
RNPC3-209ENST00000533834 HERV-K104P63124 156 aa4.88□□□□□ -1.63
RNPC3-209ENST00000533834 ATXN8Q156A1 80 aa4.88□□□□□ -1.63
RNPC3-209ENST00000533834 FAM222AQ5U5X8 452 aa4.88□□□□□ -1.63
RNPC3-209ENST00000533834 C2orf82Q6UX34 121 aa4.88□□□□□ -1.63
RNPC3-209ENST00000533834 SMCR5Q8TEV8 140 aa4.88□□□□□ -1.63
RNPC3-209ENST00000533834 HECTD4Q9Y4D8 3996 aa4.88□□□□□ -1.63
RNPC3-209ENST00000533834 GAGE7O76087 117 aa4.87□□□□□ -1.63
RNPC3-209ENST00000533834 GAGE12FP0CL80 117 aa4.87□□□□□ -1.63
RNPC3-209ENST00000533834 GAGE12GP0CL81 117 aa4.87□□□□□ -1.63
RNPC3-209ENST00000533834 GAGE12IP0CL82 117 aa4.87□□□□□ -1.63
RNPC3-209ENST00000533834 TMEM243Q9BU79 118 aa4.87□□□□□ -1.63
RNPC3-209ENST00000533834 FAM208BQ5VWN6 2430 aa4.87□□□□□ -1.63
RNPC3-209ENST00000533834 COX7A2LO14548 114 aa4.87□□□□□ -1.63
RNPC3-209ENST00000533834 WFDC9Q8NEX5 89 aa4.87□□□□□ -1.63
RNPC3-209ENST00000533834 C9JAW5 83 aa4.87□□□□□ -1.63
RNPC3-209ENST00000533834 YAE1D1Q9NRH1 226 aa4.86□□□□□ -1.63
RNPC3-209ENST00000533834 SMIM9A6NGZ8 99 aa4.86□□□□□ -1.63
RNPC3-209ENST00000533834 PRR34Q9NV39 138 aa4.86□□□□□ -1.63
RNPC3-209ENST00000533834 NBEAL2Q6ZNJ1 2754 aa4.86□□□□□ -1.63
RNPC3-209ENST00000533834 TRAV26-1A0A087WT03 109 aa4.86□□□□□ -1.63
RNPC3-209ENST00000533834 LYRM7Q5U5X0 104 aa4.86□□□□□ -1.63
RNPC3-209ENST00000533834 COX7B2Q8TF08 81 aa4.86□□□□□ -1.63
RNPC3-209ENST00000533834 CELA1Q9UNI1 258 aa4.86□□□□□ -1.63
RNPC3-209ENST00000533834 PLECQ15149 4684 aaKnown RBP4.86□□□□□ -1.63
RNPC3-209ENST00000533834 DNAH2Q9P225 4427 aa4.86□□□□□ -1.63
RNPC3-209ENST00000533834 MYO9AB2RTY4 2548 aa4.85□□□□□ -1.63
RNPC3-209ENST00000533834 J3QKU1 62 aa4.85□□□□□ -1.63
RNPC3-209ENST00000533834 RPL35AP18077 110 aaKnown RBP4.85□□□□□ -1.63
RNPC3-209ENST00000533834 Q6Q795 121 aa4.85□□□□□ -1.63
RNPC3-209ENST00000533834 CREBBPQ92793 2442 aa4.85□□□□□ -1.63
RNPC3-209ENST00000533834 CCL18P55774 89 aa4.85□□□□□ -1.63
RNPC3-209ENST00000533834 SCGB2A2Q13296 93 aa4.85□□□□□ -1.63
RNPC3-209ENST00000533834 VPS13DQ5THJ4 4388 aa4.85□□□□□ -1.63
RNPC3-209ENST00000533834 FRAS1Q86XX4 4008 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms