RNA–Protein interactions for RNA: ENST00000533682.1

CLP1-205, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 2,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-205ENST00000533682 SCGB1D4Q6XE38 83 aa8.45□□□□□ -1.06
CLP1-205ENST00000533682 TRAV8-3A0A0A6YYJ7 113 aa8.44□□□□□ -1.06
CLP1-205ENST00000533682 A8MZ25 164 aa8.44□□□□□ -1.06
CLP1-205ENST00000533682 TCL1BO95988 128 aa8.44□□□□□ -1.06
CLP1-205ENST00000533682 FHL2Q14192 279 aa8.44□□□□□ -1.06
CLP1-205ENST00000533682 HERVK_113P61574 105 aa8.44□□□□□ -1.06
CLP1-205ENST00000533682 TRBV10-1A0A0K0K1A3 114 aa8.43□□□□□ -1.06
CLP1-205ENST00000533682 J3QQQ9 107 aa8.43□□□□□ -1.06
CLP1-205ENST00000533682 SCGB1C2P0DMR2 95 aa8.43□□□□□ -1.06
CLP1-205ENST00000533682 NBEAL1Q6ZS30 2694 aa8.43□□□□□ -1.06
CLP1-205ENST00000533682 MRPS36P82909 103 aaKnown RBP8.43□□□□□ -1.06
CLP1-205ENST00000533682 TENM3Q9P273 2699 aa8.43□□□□□ -1.06
CLP1-205ENST00000533682 MEIG1Q5JSS6 88 aa8.42□□□□□ -1.06
CLP1-205ENST00000533682 DGAT2L7PQ6IED9 249 aa8.42□□□□□ -1.06
CLP1-205ENST00000533682 M0QXV9 152 aa8.42□□□□□ -1.06
CLP1-205ENST00000533682 COX6A2Q02221 97 aa8.42□□□□□ -1.06
CLP1-205ENST00000533682 KRTAP24-1Q3LI83 254 aa8.42□□□□□ -1.06
CLP1-205ENST00000533682 DAZ4Q86SG3 579 aaKnown RBP8.42□□□□□ -1.06
CLP1-205ENST00000533682 DAZ3Q9NR90 486 aaKnown RBP8.42□□□□□ -1.06
CLP1-205ENST00000533682 A0A0J9YY99 117 aa8.41□□□□□ -1.06
CLP1-205ENST00000533682 SRSF9Q13242 221 aaKnown RBP eCLIP8.41□□□□□ -1.06
CLP1-205ENST00000533682 WFDC9Q8NEX5 89 aa8.41□□□□□ -1.06
CLP1-205ENST00000533682 TRBV6-4A0A1B0GX49 114 aa8.41□□□□□ -1.06
CLP1-205ENST00000533682 TMEM126AQ9H061 195 aa8.41□□□□□ -1.06
CLP1-205ENST00000533682 PPDPFQ9H3Y8 114 aa8.41□□□□□ -1.06
CLP1-205ENST00000533682 IGHV3-30-3P0DP02 117 aa8.4□□□□□ -1.06
CLP1-205ENST00000533682 LGALS3P17931 250 aaKnown RBP8.4□□□□□ -1.06
CLP1-205ENST00000533682 LEPROTO15243 131 aa8.4□□□□□ -1.07
CLP1-205ENST00000533682 SLC25A20O43772 301 aa8.4□□□□□ -1.07
CLP1-205ENST00000533682 FAM222AQ5U5X8 452 aa8.4□□□□□ -1.07
CLP1-205ENST00000533682 CDKN2A-AS1Q9UH64 79 aa8.4□□□□□ -1.07
CLP1-205ENST00000533682 TRAV13-1A0A0B4J241 112 aa8.39□□□□□ -1.07
CLP1-205ENST00000533682 A0A096LPF7 62 aa8.39□□□□□ -1.07
CLP1-205ENST00000533682 TINCRA0A1B0GVN0 87 aa8.39□□□□□ -1.07
CLP1-205ENST00000533682 C10orf126Q8N4M7 172 aa8.39□□□□□ -1.07
CLP1-205ENST00000533682 TIMM21Q9BVV7 248 aa8.39□□□□□ -1.07
CLP1-205ENST00000533682 IGHV4-30-4P0DP06 118 aa8.38□□□□□ -1.07
CLP1-205ENST00000533682 KIR2DL5BQ8NHK3 375 aa8.38□□□□□ -1.07
CLP1-205ENST00000533682 DNAH3Q8TD57 4116 aa8.38□□□□□ -1.07
CLP1-205ENST00000533682 CDC42SE2Q9NRR3 84 aa8.38□□□□□ -1.07
CLP1-205ENST00000533682 IGHV4-28A0A0C4DH34 117 aa8.37□□□□□ -1.07
CLP1-205ENST00000533682 C9JAW5 83 aa8.37□□□□□ -1.07
CLP1-205ENST00000533682 LINC00242Q5T6M2 205 aa8.37□□□□□ -1.07
CLP1-205ENST00000533682 LINC00612Q8N6U2 182 aa8.37□□□□□ -1.07
CLP1-205ENST00000533682 C15orf53Q8NAA6 179 aa8.37□□□□□ -1.07
CLP1-205ENST00000533682 TMEM243Q9BU79 118 aa8.37□□□□□ -1.07
CLP1-205ENST00000533682 CELA1Q9UNI1 258 aa8.37□□□□□ -1.07
CLP1-205ENST00000533682 IGHV1-58A0A0C4DH39 117 aa8.36□□□□□ -1.07
CLP1-205ENST00000533682 IGKV3OR2-268A0A0C4DH90 116 aa8.36□□□□□ -1.07
CLP1-205ENST00000533682 CFC1BP0CG36 223 aa8.36□□□□□ -1.07
CLP1-205ENST00000533682 CFC1P0CG37 223 aa8.36□□□□□ -1.07
CLP1-205ENST00000533682 GYPEP15421 78 aa8.36□□□□□ -1.07
CLP1-205ENST00000533682 KRTAP10-11P60412 298 aa8.36□□□□□ -1.07
CLP1-205ENST00000533682 VSIG2Q96IQ7 327 aa8.36□□□□□ -1.07
CLP1-205ENST00000533682 IGLV4-60A0A075B6I1 120 aa8.35□□□□□ -1.07
CLP1-205ENST00000533682 SMIM9A6NGZ8 99 aa8.35□□□□□ -1.07
CLP1-205ENST00000533682 UBE2L6O14933 153 aa8.35□□□□□ -1.07
CLP1-205ENST00000533682 IGHV3-30P01768 117 aa8.35□□□□□ -1.07
CLP1-205ENST00000533682 IGHV3-30-5P0DP03 117 aa8.35□□□□□ -1.07
CLP1-205ENST00000533682 TRBV6-8A0A0A6YYG3 113 aa8.35□□□□□ -1.07
CLP1-205ENST00000533682 APOC4P55056 127 aa8.35□□□□□ -1.07
CLP1-205ENST00000533682 C5orf47Q569G3 176 aa8.35□□□□□ -1.07
CLP1-205ENST00000533682 TRAV8-4A0A0B4J246 113 aa8.34□□□□□ -1.07
CLP1-205ENST00000533682 PRIMA1Q86XR5 153 aa8.34□□□□□ -1.07
CLP1-205ENST00000533682 NTN5Q8WTR8 489 aaPredicted RBP8.34□□□□□ -1.07
CLP1-205ENST00000533682 PRO1854Q9UHT4 67 aa8.34□□□□□ -1.07
CLP1-205ENST00000533682 CSDC2Q9Y534 153 aaKnown RBP8.34□□□□□ -1.07
CLP1-205ENST00000533682 A0A0J9YXY3 114 aa8.34□□□□□ -1.07
CLP1-205ENST00000533682 Q8NAQ8 132 aa8.34□□□□□ -1.07
CLP1-205ENST00000533682 TMEM101Q96IK0 257 aa8.34□□□□□ -1.07
CLP1-205ENST00000533682 CHCHD5Q9BSY4 110 aa8.34□□□□□ -1.07
CLP1-205ENST00000533682 WIPF1O43516 503 aa8.33□□□□□ -1.08
CLP1-205ENST00000533682 RPL13AP40429 203 aaKnown RBP8.33□□□□□ -1.08
CLP1-205ENST00000533682 MRPL23Q16540 153 aaKnown RBP8.33□□□□□ -1.08
CLP1-205ENST00000533682 ADAMTSL4-AS1Q5T5F5 129 aa8.33□□□□□ -1.08
CLP1-205ENST00000533682 C3orf56Q8N813 242 aa8.33□□□□□ -1.08
CLP1-205ENST00000533682 LINC01600Q96MT4 127 aa8.33□□□□□ -1.08
CLP1-205ENST00000533682 NDUFA12Q9UI09 145 aa8.33□□□□□ -1.08
CLP1-205ENST00000533682 MGAM2Q2M2H8 2515 aa8.32□□□□□ -1.08
CLP1-205ENST00000533682 IGLV5-45A0A087WSX0 123 aa8.32□□□□□ -1.08
CLP1-205ENST00000533682 TIRAPP58753 221 aa8.32□□□□□ -1.08
CLP1-205ENST00000533682 LITAFQ99732 161 aa8.32□□□□□ -1.08
CLP1-205ENST00000533682 RETNQ9HD89 108 aa8.32□□□□□ -1.08
CLP1-205ENST00000533682 PRO0255Q9UI72 69 aa8.32□□□□□ -1.08
CLP1-205ENST00000533682 TEX49A0A1B0GTD5 131 aa8.31□□□□□ -1.08
CLP1-205ENST00000533682 EIF4EBP3O60516 100 aaPredicted RBP8.31□□□□□ -1.08
CLP1-205ENST00000533682 NPC2P61916 151 aa8.31□□□□□ -1.08
CLP1-205ENST00000533682 MUSTN1Q8IVN3 82 aa8.31□□□□□ -1.08
CLP1-205ENST00000533682 ZNF625Q96I27 306 aaPredicted RBP8.31□□□□□ -1.08
CLP1-205ENST00000533682 LYRM9A8MSI8 78 aa8.31□□□□□ -1.08
CLP1-205ENST00000533682 PAX4O43316 350 aa8.31□□□□□ -1.08
CLP1-205ENST00000533682 HTN3P15516 51 aa8.31□□□□□ -1.08
CLP1-205ENST00000533682 DAD1P61803 113 aa8.31□□□□□ -1.08
CLP1-205ENST00000533682 HERVK_113P63121 156 aa8.31□□□□□ -1.08
CLP1-205ENST00000533682 DAND5Q8N907 189 aa8.31□□□□□ -1.08
CLP1-205ENST00000533682 A4D1N5 150 aa8.3□□□□□ -1.08
CLP1-205ENST00000533682 PRSS2P07478 247 aa8.3□□□□□ -1.08
CLP1-205ENST00000533682 SMIM1B2RUZ4 78 aa8.3□□□□□ -1.08
CLP1-205ENST00000533682 Q8N3U1 123 aa8.3□□□□□ -1.08
CLP1-205ENST00000533682 A0A0U1RRA0 63 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms