RNA–Protein interactions for RNA: ENST00000527442.5

PKP3-205, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-205ENST00000527442 ANGP03950 147 aaKnown RBP13.99□□□□□ -0.17
PKP3-205ENST00000527442 HAMPP81172 84 aa13.99□□□□□ -0.17
PKP3-205ENST00000527442 PMVKQ15126 192 aa13.99□□□□□ -0.17
PKP3-205ENST00000527442 VCX2Q9H322 139 aa13.99□□□□□ -0.17
PKP3-205ENST00000527442 PRR34Q9NV39 138 aa13.99□□□□□ -0.17
PKP3-205ENST00000527442 TRAV12-1A0A0B4J245 112 aa13.98□□□□□ -0.17
PKP3-205ENST00000527442 C3orf79P0CE67 100 aa13.98□□□□□ -0.17
PKP3-205ENST00000527442 RNASE13Q5GAN3 156 aaKnown RBP13.98□□□□□ -0.17
PKP3-205ENST00000527442 SYS1-DBNDD2H3BUS1 97 aa13.97□□□□□ -0.17
PKP3-205ENST00000527442 C10orf126Q8N4M7 172 aa13.97□□□□□ -0.17
PKP3-205ENST00000527442 C2orf88Q9BSF0 95 aa13.97□□□□□ -0.17
PKP3-205ENST00000527442 KLK12Q9UKR0 248 aa13.97□□□□□ -0.17
PKP3-205ENST00000527442 PRSS1P07477 247 aa13.96□□□□□ -0.17
PKP3-205ENST00000527442 ZC2HC1BQ5TFG8 222 aa13.96□□□□□ -0.17
PKP3-205ENST00000527442 NFE4Q86UQ8 179 aa13.96□□□□□ -0.17
PKP3-205ENST00000527442 LINC00269Q8N2A0 174 aa13.96□□□□□ -0.17
PKP3-205ENST00000527442 CST9LQ9H4G1 147 aa13.96□□□□□ -0.17
PKP3-205ENST00000527442 REG3AQ06141 175 aa13.95□□□□□ -0.18
PKP3-205ENST00000527442 PET117Q6UWS5 81 aa13.95□□□□□ -0.18
PKP3-205ENST00000527442 OR10D4PQ8NGN7 298 aa13.95□□□□□ -0.18
PKP3-205ENST00000527442 TRAV9-2A0A087WT02 112 aa13.94□□□□□ -0.18
PKP3-205ENST00000527442 KRTDAPP60985 99 aa13.94□□□□□ -0.18
PKP3-205ENST00000527442 IBA57-AS1B1ANH7 110 aa13.93□□□□□ -0.18
PKP3-205ENST00000527442 CRPP02741 224 aa13.93□□□□□ -0.18
PKP3-205ENST00000527442 GCSHP23434 173 aa13.93□□□□□ -0.18
PKP3-205ENST00000527442 UBE2D1P51668 147 aa13.93□□□□□ -0.18
PKP3-205ENST00000527442 ODF1Q14990 250 aa13.93□□□□□ -0.18
PKP3-205ENST00000527442 CLPSL2Q6UWE3 100 aa13.93□□□□□ -0.18
PKP3-205ENST00000527442 FAM19A3Q7Z5A8 133 aa13.93□□□□□ -0.18
PKP3-205ENST00000527442 FAM229AH3BQW9 127 aa13.92□□□□□ -0.18
PKP3-205ENST00000527442 CCL25O15444 150 aa13.92□□□□□ -0.18
PKP3-205ENST00000527442 ENHOQ6UWT2 76 aa13.92□□□□□ -0.18
PKP3-205ENST00000527442 LINC00959A0A1B0GUT2 108 aa13.91□□□□□ -0.18
PKP3-205ENST00000527442 F8VRH5 84 aa13.91□□□□□ -0.18
PKP3-205ENST00000527442 H0Y8G0 127 aa13.91□□□□□ -0.18
PKP3-205ENST00000527442 MIAQ16674 131 aa13.91□□□□□ -0.18
PKP3-205ENST00000527442 LINC01545Q5VT33 79 aa13.91□□□□□ -0.18
PKP3-205ENST00000527442 UBE2WQ96B02 151 aa13.91□□□□□ -0.18
PKP3-205ENST00000527442 TRAV13-1A0A0B4J241 112 aa13.9□□□□□ -0.18
PKP3-205ENST00000527442 J3QL48 77 aa13.9□□□□□ -0.18
PKP3-205ENST00000527442 CHTOPQ9Y3Y2 248 aaKnown RBP13.9□□□□□ -0.18
PKP3-205ENST00000527442 IGLV4-69A0A075B6H9 119 aa13.89□□□□□ -0.19
PKP3-205ENST00000527442 TRAV8-4A0A0B4J246 113 aa13.89□□□□□ -0.19
PKP3-205ENST00000527442 IGKV3OR2-268A0A0C4DH90 116 aa13.89□□□□□ -0.19
PKP3-205ENST00000527442 IGLC3P0DOY3 106 aa13.89□□□□□ -0.19
PKP3-205ENST00000527442 TRAV8-3A0A0A6YYJ7 113 aa13.88□□□□□ -0.19
PKP3-205ENST00000527442 C20orf202A1L168 122 aa13.88□□□□□ -0.19
PKP3-205ENST00000527442 SEC11AP67812 179 aa13.88□□□□□ -0.19
PKP3-205ENST00000527442 SS18Q15532 418 aa13.88□□□□□ -0.19
PKP3-205ENST00000527442 MRPL35Q9NZE8 188 aaKnown RBP13.88□□□□□ -0.19
PKP3-205ENST00000527442 LOC105371267A0A1B0GV96 52 aa13.87□□□□□ -0.19
PKP3-205ENST00000527442 LINC00242Q5T6M2 205 aa13.87□□□□□ -0.19
PKP3-205ENST00000527442 A0A0J9YXV3 536 aa13.86□□□□□ -0.19
PKP3-205ENST00000527442 TINCRA0A1B0GVN0 87 aa13.86□□□□□ -0.19
PKP3-205ENST00000527442 PLNP26678 52 aa13.85□□□□□ -0.19
PKP3-205ENST00000527442 HERVK_113P63121 156 aa13.85□□□□□ -0.19
PKP3-205ENST00000527442 CHAC1Q9BUX1 264 aa13.85□□□□□ -0.19
PKP3-205ENST00000527442 IGLV5-45A0A087WSX0 123 aa13.84□□□□□ -0.19
PKP3-205ENST00000527442 IGLV5-52A0A0A0MRZ9 124 aa13.84□□□□□ -0.19
PKP3-205ENST00000527442 DPM2O94777 84 aa13.84□□□□□ -0.19
PKP3-205ENST00000527442 AKR1D1P51857 326 aa13.84□□□□□ -0.19
PKP3-205ENST00000527442 CHCHD10Q8WYQ3 142 aaPredicted RBP13.84□□□□□ -0.19
PKP3-205ENST00000527442 PMCHL2Q9BQD1 86 aa13.84□□□□□ -0.19
PKP3-205ENST00000527442 IGLV10-54A0A075B6I4 117 aa13.83□□□□□ -0.2
PKP3-205ENST00000527442 C11orf86A6NJI1 115 aa13.83□□□□□ -0.2
PKP3-205ENST00000527442 JOSD1Q15040 202 aaPredicted RBP13.83□□□□□ -0.2
PKP3-205ENST00000527442 RMI2Q96E14 147 aa13.83□□□□□ -0.2
PKP3-205ENST00000527442 C1orf43Q9BWL3 253 aa13.83□□□□□ -0.2
PKP3-205ENST00000527442 IGKCP01834 107 aa13.82□□□□□ -0.2
PKP3-205ENST00000527442 KRTAP26-1Q6PEX3 210 aa13.82□□□□□ -0.2
PKP3-205ENST00000527442 CD164L2Q6UWJ8 174 aa13.82□□□□□ -0.2
PKP3-205ENST00000527442 GEMIN7Q9H840 131 aaKnown RBP13.82□□□□□ -0.2
PKP3-205ENST00000527442 Q9HAA7 133 aa13.82□□□□□ -0.2
PKP3-205ENST00000527442 IGHV3OR16-9A0A0B4J2B5 98 aa13.81□□□□□ -0.2
PKP3-205ENST00000527442 XCL1P47992 114 aa13.81□□□□□ -0.2
PKP3-205ENST00000527442 COX6A2Q02221 97 aa13.81□□□□□ -0.2
PKP3-205ENST00000527442 LRCOL1A6NCL2 159 aa13.8□□□□□ -0.2
PKP3-205ENST00000527442 ZNF22P17026 224 aaPredicted RBP13.8□□□□□ -0.2
PKP3-205ENST00000527442 FAM30AQ9NZY2 134 aa13.8□□□□□ -0.2
PKP3-205ENST00000527442 IGKV2D-24A0A075B6R9 120 aa13.79□□□□□ -0.2
PKP3-205ENST00000527442 SCGB1D1O95968 90 aa13.79□□□□□ -0.2
PKP3-205ENST00000527442 FOXI1Q12951 378 aa13.79□□□□□ -0.2
PKP3-205ENST00000527442 NTN5Q8WTR8 489 aaPredicted RBP13.79□□□□□ -0.2
PKP3-205ENST00000527442 COX11Q9Y6N1 276 aa13.79□□□□□ -0.2
PKP3-205ENST00000527442 DNAH8Q96JB1 4490 aa13.78□□□□□ -0.2
PKP3-205ENST00000527442 GAGE12HA6NDE8 117 aa13.78□□□□□ -0.2
PKP3-205ENST00000527442 PYY3Q5JQD4 70 aa13.78□□□□□ -0.2
PKP3-205ENST00000527442 LINC00469Q8N7U9 141 aa13.78□□□□□ -0.2
PKP3-205ENST00000527442 CDKN2A-AS1Q9UH64 79 aa13.78□□□□□ -0.2
PKP3-205ENST00000527442 LINC01561Q8N1V8 128 aa13.77□□□□□ -0.21
PKP3-205ENST00000527442 A0A087WZ39 114 aa13.76□□□□□ -0.21
PKP3-205ENST00000527442 KRTAP29-1A8MX34 341 aaPredicted RBP13.76□□□□□ -0.21
PKP3-205ENST00000527442 PSCAO43653 123 aa13.76□□□□□ -0.21
PKP3-205ENST00000527442 TM2D2Q9BX73 214 aa13.76□□□□□ -0.21
PKP3-205ENST00000527442 H3BRM9 83 aa13.75□□□□□ -0.21
PKP3-205ENST00000527442 COX7A2LO14548 114 aa13.75□□□□□ -0.21
PKP3-205ENST00000527442 TMEM170BQ5T4T1 132 aa13.75□□□□□ -0.21
PKP3-205ENST00000527442 Q8N814 137 aa13.75□□□□□ -0.21
PKP3-205ENST00000527442 TMEM223A0PJW6 202 aa13.73□□□□□ -0.21
PKP3-205ENST00000527442 C5orf38Q86SI9 138 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms