RNA–Protein interactions for RNA: ENST00000526874.5

CTR9-203, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene CTR9, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-203ENST00000526874 M0R2N4 97 aa2.32□□□□□ -2.04
CTR9-203ENST00000526874 COX6CP09669 75 aa2.32□□□□□ -2.04
CTR9-203ENST00000526874 LENEPQ9Y5L5 61 aa2.32□□□□□ -2.04
CTR9-203ENST00000526874 VCANP13611 3396 aa2.32□□□□□ -2.04
CTR9-203ENST00000526874 MRC1P22897 1456 aa2.32□□□□□ -2.04
CTR9-203ENST00000526874 NKTRP30414 1462 aaKnown RBP2.32□□□□□ -2.04
CTR9-203ENST00000526874 ADGRB2O60241 1585 aa2.32□□□□□ -2.04
CTR9-203ENST00000526874 TPRP12270 2363 aaKnown RBP2.31□□□□□ -2.04
CTR9-203ENST00000526874 STRCP1A6NGW2 1772 aa2.31□□□□□ -2.04
CTR9-203ENST00000526874 TNRC6BQ9UPQ9 1833 aaKnown RBP2.31□□□□□ -2.04
CTR9-203ENST00000526874 TRBV25-1A0A075B6N4 114 aa2.31□□□□□ -2.04
CTR9-203ENST00000526874 IGLV3-32A0A0A0MS00 114 aa2.31□□□□□ -2.04
CTR9-203ENST00000526874 H3BUT2 72 aa2.31□□□□□ -2.04
CTR9-203ENST00000526874 SPAG11BQ08648 103 aa2.31□□□□□ -2.04
CTR9-203ENST00000526874 SPAG11AQ6PDA7 123 aa2.31□□□□□ -2.04
CTR9-203ENST00000526874 PP632Q6XCG6 107 aa2.31□□□□□ -2.04
CTR9-203ENST00000526874 C5orf56Q8N8D9 126 aa2.31□□□□□ -2.04
CTR9-203ENST00000526874 LINC00208Q96KT6 92 aa2.31□□□□□ -2.04
CTR9-203ENST00000526874 MUC6Q6W4X9 2439 aa2.31□□□□□ -2.04
CTR9-203ENST00000526874 PIK3C2BO00750 1634 aa2.31□□□□□ -2.04
CTR9-203ENST00000526874 IGKV2-40A0A087WW87 121 aaPredicted RBP2.3□□□□□ -2.04
CTR9-203ENST00000526874 LOC110117498A0A087WWA1 95 aa2.3□□□□□ -2.04
CTR9-203ENST00000526874 CFDP00746 253 aaPredicted RBP2.3□□□□□ -2.04
CTR9-203ENST00000526874 IGKV2D-40P01614 121 aaPredicted RBP2.3□□□□□ -2.04
CTR9-203ENST00000526874 TMEM14BQ9NUH8 114 aa2.3□□□□□ -2.04
CTR9-203ENST00000526874 C1orf167Q5SNV9 1468 aa2.3□□□□□ -2.04
CTR9-203ENST00000526874 TRPM2O94759 1503 aa2.3□□□□□ -2.04
CTR9-203ENST00000526874 DEPDC5O75140 1603 aa2.3□□□□□ -2.04
CTR9-203ENST00000526874 MYOM1P52179 1685 aa2.3□□□□□ -2.04
CTR9-203ENST00000526874 ZC3H13Q5T200 1668 aaKnown RBP2.3□□□□□ -2.04
CTR9-203ENST00000526874 EPG5Q9HCE0 2579 aa2.3□□□□□ -2.04
CTR9-203ENST00000526874 KMT2BQ9UMN6 2715 aaPredicted RBP2.3□□□□□ -2.04
CTR9-203ENST00000526874 PEAK1Q9H792 1746 aa2.29□□□□□ -2.04
CTR9-203ENST00000526874 CROCC2H7BZ55 1655 aa2.29□□□□□ -2.04
CTR9-203ENST00000526874 IQGAP1P46940 1657 aa2.29□□□□□ -2.04
CTR9-203ENST00000526874 F2Z2F3 143 aa2.29□□□□□ -2.04
CTR9-203ENST00000526874 HCRTO43612 131 aa2.29□□□□□ -2.04
CTR9-203ENST00000526874 CFAP126Q5VTH2 177 aa2.29□□□□□ -2.04
CTR9-203ENST00000526874 LAMA2P24043 3122 aaKnown RBP2.28□□□□□ -2.04
CTR9-203ENST00000526874 GBF1Q92538 1859 aa2.28□□□□□ -2.04
CTR9-203ENST00000526874 TMEM131LA2VDJ0 1609 aa2.28□□□□□ -2.04
CTR9-203ENST00000526874 LRRC37A3O60309 1634 aa2.28□□□□□ -2.04
CTR9-203ENST00000526874 IQGAP3Q86VI3 1631 aa2.28□□□□□ -2.04
CTR9-203ENST00000526874 CCL18P55774 89 aa2.28□□□□□ -2.04
CTR9-203ENST00000526874 KRTAP10-1P60331 282 aa2.28□□□□□ -2.04
CTR9-203ENST00000526874 SNRPFP62306 86 aaKnown RBP2.28□□□□□ -2.04
CTR9-203ENST00000526874 XAF1Q6GPH4 301 aa2.28□□□□□ -2.04
CTR9-203ENST00000526874 LINC01600Q96MT4 127 aa2.28□□□□□ -2.04
CTR9-203ENST00000526874 ARL2-SNX15V9GYD0 113 aa2.28□□□□□ -2.04
CTR9-203ENST00000526874 V9GYH0 126 aa2.28□□□□□ -2.04
CTR9-203ENST00000526874 AFDNP55196 1824 aaKnown RBP2.28□□□□□ -2.04
CTR9-203ENST00000526874 INTS1Q8N201 2190 aaKnown RBP2.27□□□□□ -2.05
CTR9-203ENST00000526874 NEXMIFQ5QGS0 1516 aa2.27□□□□□ -2.05
CTR9-203ENST00000526874 ASXL1Q8IXJ9 1541 aa2.27□□□□□ -2.05
CTR9-203ENST00000526874 ABCA12Q86UK0 2595 aa2.27□□□□□ -2.05
CTR9-203ENST00000526874 PTPN13Q12923 2485 aa2.27□□□□□ -2.05
CTR9-203ENST00000526874 PTPRZ1P23471 2315 aaPredicted RBP2.27□□□□□ -2.05
CTR9-203ENST00000526874 F8WEM9 126 aa2.27□□□□□ -2.05
CTR9-203ENST00000526874 BCE1O60756 84 aa2.27□□□□□ -2.05
CTR9-203ENST00000526874 TMEM170BQ5T4T1 132 aa2.27□□□□□ -2.05
CTR9-203ENST00000526874 PSENENQ9NZ42 101 aa2.27□□□□□ -2.05
CTR9-203ENST00000526874 LOC285556D6RIA3 1793 aa2.27□□□□□ -2.05
CTR9-203ENST00000526874 CHD6Q8TD26 2715 aa2.27□□□□□ -2.05
CTR9-203ENST00000526874 E9PCH4 1651 aa2.27□□□□□ -2.05
CTR9-203ENST00000526874 SCN7AQ01118 1682 aa2.27□□□□□ -2.05
CTR9-203ENST00000526874 CLTCL1P53675 1640 aa2.27□□□□□ -2.05
CTR9-203ENST00000526874 ZNF462Q96JM2 2506 aa2.27□□□□□ -2.05
CTR9-203ENST00000526874 DIP2AQ14689 1571 aa2.27□□□□□ -2.05
CTR9-203ENST00000526874 SPTBN4Q9H254 2564 aa2.26□□□□□ -2.05
CTR9-203ENST00000526874 TRGV2A0A075B6R0 118 aa2.26□□□□□ -2.05
CTR9-203ENST00000526874 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.26□□□□□ -2.05
CTR9-203ENST00000526874 KANTRA0A1W2PQU2 76 aa2.26□□□□□ -2.05
CTR9-203ENST00000526874 FAM223BA6NKX1 122 aa2.26□□□□□ -2.05
CTR9-203ENST00000526874 KRTAP13-4Q3LI77 160 aa2.26□□□□□ -2.05
CTR9-203ENST00000526874 FAM74A4Q5TZK3 123 aa2.26□□□□□ -2.05
CTR9-203ENST00000526874 C18orf32Q8TCD1 76 aa2.26□□□□□ -2.05
CTR9-203ENST00000526874 V9GYV3 84 aa2.26□□□□□ -2.05
CTR9-203ENST00000526874 TEP1Q99973 2627 aaKnown RBP2.26□□□□□ -2.05
CTR9-203ENST00000526874 PDCD11Q14690 1871 aaKnown RBP2.26□□□□□ -2.05
CTR9-203ENST00000526874 ANKARQ7Z5J8 1434 aa2.25□□□□□ -2.05
CTR9-203ENST00000526874 SHPRHQ149N8 1683 aa2.25□□□□□ -2.05
CTR9-203ENST00000526874 CFAP47Q6ZTR5 3102 aa2.25□□□□□ -2.05
CTR9-203ENST00000526874 LOC285095A0A1B0GVY8 99 aa2.25□□□□□ -2.05
CTR9-203ENST00000526874 ZNF815PA8K554 130 aa2.25□□□□□ -2.05
CTR9-203ENST00000526874 FXYD1O00168 92 aa2.25□□□□□ -2.05
CTR9-203ENST00000526874 PSMG4Q5JS54 123 aa2.25□□□□□ -2.05
CTR9-203ENST00000526874 BRD3OSQ6XYD6 125 aa2.25□□□□□ -2.05
CTR9-203ENST00000526874 Q86TA4 180 aa2.25□□□□□ -2.05
CTR9-203ENST00000526874 LINC00643Q86TS7 51 aa2.25□□□□□ -2.05
CTR9-203ENST00000526874 DEFB123Q8N688 67 aa2.25□□□□□ -2.05
CTR9-203ENST00000526874 OBSCN-AS1Q96MR7 158 aa2.25□□□□□ -2.05
CTR9-203ENST00000526874 POLR1AO95602 1720 aaPredicted RBP2.25□□□□□ -2.05
CTR9-203ENST00000526874 CENPFP49454 3210 aa2.25□□□□□ -2.05
CTR9-203ENST00000526874 NRXN3Q9Y4C0 1643 aa2.24□□□□□ -2.05
CTR9-203ENST00000526874 LTN1O94822 1766 aa2.24□□□□□ -2.05
CTR9-203ENST00000526874 DOPEY1Q5JWR5 2465 aa2.24□□□□□ -2.05
CTR9-203ENST00000526874 ITPR3Q14573 2671 aa2.24□□□□□ -2.05
CTR9-203ENST00000526874 F8VRH5 84 aa2.24□□□□□ -2.05
CTR9-203ENST00000526874 M0R135 149 aa2.24□□□□□ -2.05
CTR9-203ENST00000526874 SMIM11AP58511 58 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms