RNA–Protein interactions for RNA: ENST00000522348.1

SPARC-205, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-205ENST00000522348 DNAH3Q8TD57 4116 aa6.67□□□□□ -1.34
SPARC-205ENST00000522348 TRAV8-3A0A0A6YYJ7 113 aa6.67□□□□□ -1.34
SPARC-205ENST00000522348 IGLV5-39A0A0G2JS06 123 aa6.67□□□□□ -1.34
SPARC-205ENST00000522348 TSPEAR-AS2P59090 65 aa6.67□□□□□ -1.34
SPARC-205ENST00000522348 SRSF9Q13242 221 aaKnown RBP eCLIP6.67□□□□□ -1.34
SPARC-205ENST00000522348 SPANXB1Q9NS25 103 aaPredicted RBP6.67□□□□□ -1.34
SPARC-205ENST00000522348 IGKV3OR2-268A0A0C4DH90 116 aa6.66□□□□□ -1.34
SPARC-205ENST00000522348 GCSHP23434 173 aa6.66□□□□□ -1.34
SPARC-205ENST00000522348 PTTG1IPP53801 180 aa6.66□□□□□ -1.34
SPARC-205ENST00000522348 ZFAND6Q6FIF0 208 aa6.66□□□□□ -1.34
SPARC-205ENST00000522348 LINC01561Q8N1V8 128 aa6.66□□□□□ -1.34
SPARC-205ENST00000522348 NDUFA12Q9UI09 145 aa6.66□□□□□ -1.34
SPARC-205ENST00000522348 ANK2Q01484 3957 aa6.66□□□□□ -1.34
SPARC-205ENST00000522348 IGHV3OR16-9A0A0B4J2B5 98 aa6.65□□□□□ -1.34
SPARC-205ENST00000522348 A0A1B0GV90 55 aa6.65□□□□□ -1.34
SPARC-205ENST00000522348 SMIM1B2RUZ4 78 aa6.65□□□□□ -1.34
SPARC-205ENST00000522348 ANGP03950 147 aaKnown RBP6.65□□□□□ -1.34
SPARC-205ENST00000522348 SMIM13P0DJ93 91 aa6.65□□□□□ -1.34
SPARC-205ENST00000522348 LINC00269Q8N2A0 174 aa6.65□□□□□ -1.34
SPARC-205ENST00000522348 C15orf53Q8NAA6 179 aa6.65□□□□□ -1.34
SPARC-205ENST00000522348 B9D2Q9BPU9 175 aa6.65□□□□□ -1.34
SPARC-205ENST00000522348 A0A087WZ39 114 aa6.64□□□□□ -1.35
SPARC-205ENST00000522348 A0A0J9YXY3 114 aa6.64□□□□□ -1.35
SPARC-205ENST00000522348 TMEM238C9JI98 176 aa6.64□□□□□ -1.35
SPARC-205ENST00000522348 NHLRC4P0CG21 123 aaPredicted RBP6.64□□□□□ -1.35
SPARC-205ENST00000522348 REG3AQ06141 175 aa6.64□□□□□ -1.35
SPARC-205ENST00000522348 CIRBPQ14011 172 aaKnown RBP6.64□□□□□ -1.35
SPARC-205ENST00000522348 Q6ZVH6 145 aa6.64□□□□□ -1.35
SPARC-205ENST00000522348 TMEM238LA0A1B0GVL6 79 aa6.63□□□□□ -1.35
SPARC-205ENST00000522348 A6NJY4 79 aa6.63□□□□□ -1.35
SPARC-205ENST00000522348 NDUFA1O15239 70 aa6.63□□□□□ -1.35
SPARC-205ENST00000522348 TIMM17BO60830 172 aa6.63□□□□□ -1.35
SPARC-205ENST00000522348 HERV-K104P63124 156 aa6.63□□□□□ -1.35
SPARC-205ENST00000522348 ESRGQ1W209 222 aa6.63□□□□□ -1.35
SPARC-205ENST00000522348 CD164L2Q6UWJ8 174 aa6.63□□□□□ -1.35
SPARC-205ENST00000522348 TAX1BP3O14907 124 aa6.62□□□□□ -1.35
SPARC-205ENST00000522348 FXYD2P54710 66 aa6.62□□□□□ -1.35
SPARC-205ENST00000522348 C10orf126Q8N4M7 172 aa6.62□□□□□ -1.35
SPARC-205ENST00000522348 COX7B2Q8TF08 81 aa6.62□□□□□ -1.35
SPARC-205ENST00000522348 TRAV8-4A0A0B4J246 113 aa6.61□□□□□ -1.35
SPARC-205ENST00000522348 IGHV3-30P01768 117 aa6.61□□□□□ -1.35
SPARC-205ENST00000522348 IGHV3-30-5P0DP03 117 aa6.61□□□□□ -1.35
SPARC-205ENST00000522348 XCL1P47992 114 aa6.61□□□□□ -1.35
SPARC-205ENST00000522348 SFTA2Q6UW10 78 aa6.61□□□□□ -1.35
SPARC-205ENST00000522348 C5orf38Q86SI9 138 aa6.61□□□□□ -1.35
SPARC-205ENST00000522348 CHCHD10Q8WYQ3 142 aaPredicted RBP6.61□□□□□ -1.35
SPARC-205ENST00000522348 Q9H8V8 135 aa6.61□□□□□ -1.35
SPARC-205ENST00000522348 PRR34Q9NV39 138 aa6.61□□□□□ -1.35
SPARC-205ENST00000522348 KLK12Q9UKR0 248 aa6.61□□□□□ -1.35
SPARC-205ENST00000522348 COX11Q9Y6N1 276 aa6.61□□□□□ -1.35
SPARC-205ENST00000522348 COX7A2LO14548 114 aa6.6□□□□□ -1.35
SPARC-205ENST00000522348 IFITM1P13164 125 aa6.6□□□□□ -1.35
SPARC-205ENST00000522348 RPL24P83731 157 aaKnown RBP6.6□□□□□ -1.35
SPARC-205ENST00000522348 C6orf226Q5I0X4 101 aa6.6□□□□□ -1.35
SPARC-205ENST00000522348 COPS9Q8WXC6 57 aa6.6□□□□□ -1.35
SPARC-205ENST00000522348 SPANXDQ9BXN6 97 aa6.6□□□□□ -1.35
SPARC-205ENST00000522348 NHP2Q9NX24 153 aaKnown RBP6.6□□□□□ -1.35
SPARC-205ENST00000522348 SPANXCQ9NY87 97 aa6.6□□□□□ -1.35
SPARC-205ENST00000522348 A0A1B0GWB2 263 aa6.59□□□□□ -1.35
SPARC-205ENST00000522348 C9orf118A6NHY6 69 aa6.59□□□□□ -1.35
SPARC-205ENST00000522348 IGHV3-33P01772 117 aa6.59□□□□□ -1.35
SPARC-205ENST00000522348 CRPP02741 224 aa6.59□□□□□ -1.35
SPARC-205ENST00000522348 PRSS2P07478 247 aa6.59□□□□□ -1.35
SPARC-205ENST00000522348 MALP21145 153 aa6.59□□□□□ -1.35
SPARC-205ENST00000522348 CLPSL2Q6UWE3 100 aa6.59□□□□□ -1.35
SPARC-205ENST00000522348 ENHOQ6UWT2 76 aa6.59□□□□□ -1.35
SPARC-205ENST00000522348 MUSTN1Q8IVN3 82 aa6.59□□□□□ -1.35
SPARC-205ENST00000522348 ZNF625Q96I27 306 aaPredicted RBP6.59□□□□□ -1.35
SPARC-205ENST00000522348 LITAFQ99732 161 aa6.59□□□□□ -1.35
SPARC-205ENST00000522348 TOMM7Q9P0U1 55 aa6.59□□□□□ -1.35
SPARC-205ENST00000522348 FBN3Q75N90 2809 aa6.58□□□□□ -1.36
SPARC-205ENST00000522348 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.58□□□□□ -1.36
SPARC-205ENST00000522348 K7EP13 123 aa6.58□□□□□ -1.36
SPARC-205ENST00000522348 APOMO95445 188 aa6.58□□□□□ -1.36
SPARC-205ENST00000522348 CCL18P55774 89 aa6.58□□□□□ -1.36
SPARC-205ENST00000522348 MIAQ16674 131 aa6.58□□□□□ -1.36
SPARC-205ENST00000522348 LINC01556Q5JQF7 62 aa6.58□□□□□ -1.36
SPARC-205ENST00000522348 ADAMTSL4-AS1Q5T5F5 129 aa6.58□□□□□ -1.36
SPARC-205ENST00000522348 WFDC10BQ8IUB3 73 aa6.58□□□□□ -1.36
SPARC-205ENST00000522348 Q8IZM0 81 aa6.58□□□□□ -1.36
SPARC-205ENST00000522348 Q8N3U1 123 aa6.58□□□□□ -1.36
SPARC-205ENST00000522348 NOTCH1P46531 2555 aa6.58□□□□□ -1.36
SPARC-205ENST00000522348 IGLV10-54A0A075B6I4 117 aa6.57□□□□□ -1.36
SPARC-205ENST00000522348 GAGE12HA6NDE8 117 aa6.57□□□□□ -1.36
SPARC-205ENST00000522348 IGLL5B9A064 214 aa6.57□□□□□ -1.36
SPARC-205ENST00000522348 FOXI1Q12951 378 aa6.57□□□□□ -1.36
SPARC-205ENST00000522348 MEIG1Q5JSS6 88 aa6.57□□□□□ -1.36
SPARC-205ENST00000522348 RAB37Q96AX2 223 aa6.57□□□□□ -1.36
SPARC-205ENST00000522348 UBE2WQ96B02 151 aa6.57□□□□□ -1.36
SPARC-205ENST00000522348 KLK5Q9Y337 293 aaPredicted RBP6.57□□□□□ -1.36
SPARC-205ENST00000522348 NBEAL1Q6ZS30 2694 aa6.57□□□□□ -1.36
SPARC-205ENST00000522348 DNAH10OSP0CZ25 163 aa6.56□□□□□ -1.36
SPARC-205ENST00000522348 CXCL5P42830 114 aa6.56□□□□□ -1.36
SPARC-205ENST00000522348 VAMP3Q15836 100 aa6.56□□□□□ -1.36
SPARC-205ENST00000522348 CFAP161Q6P656 301 aa6.56□□□□□ -1.36
SPARC-205ENST00000522348 PPDPFQ9H3Y8 114 aa6.56□□□□□ -1.36
SPARC-205ENST00000522348 MGAM2Q2M2H8 2515 aa6.56□□□□□ -1.36
SPARC-205ENST00000522348 A4D1N5 150 aa6.55□□□□□ -1.36
SPARC-205ENST00000522348 IBA57-AS1B1ANH7 110 aa6.55□□□□□ -1.36
SPARC-205ENST00000522348 H3BUT2 72 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms