RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 C20orf78Q9BR46 151 aa0.84□□□□□ -2.27
PTPN12-213ENST00000519553 PRR15LQ9BU68 103 aa0.84□□□□□ -2.27
PTPN12-213ENST00000519553 SCN7AQ01118 1682 aa0.84□□□□□ -2.28
PTPN12-213ENST00000519553 CADP27708 2225 aa0.84□□□□□ -2.28
PTPN12-213ENST00000519553 CACNA1CQ13936 2221 aa0.84□□□□□ -2.28
PTPN12-213ENST00000519553 MON2Q7Z3U7 1717 aa0.84□□□□□ -2.28
PTPN12-213ENST00000519553 FAM223BA6NKX1 122 aa0.83□□□□□ -2.28
PTPN12-213ENST00000519553 K7EP34 96 aa0.83□□□□□ -2.28
PTPN12-213ENST00000519553 UQCRHP07919 91 aa0.83□□□□□ -2.28
PTPN12-213ENST00000519553 GCHFRP30047 84 aa0.83□□□□□ -2.28
PTPN12-213ENST00000519553 PMCHL1Q16048 86 aa0.83□□□□□ -2.28
PTPN12-213ENST00000519553 SFTA2Q6UW10 78 aa0.83□□□□□ -2.28
PTPN12-213ENST00000519553 ATP10BO94823 1461 aa0.83□□□□□ -2.28
PTPN12-213ENST00000519553 NRXN1Q9ULB1 1477 aa0.83□□□□□ -2.28
PTPN12-213ENST00000519553 CLTCQ00610 1675 aaKnown RBP0.83□□□□□ -2.28
PTPN12-213ENST00000519553 PDCD11Q14690 1871 aaKnown RBP0.82□□□□□ -2.28
PTPN12-213ENST00000519553 CCDC18Q5T9S5 1454 aa0.82□□□□□ -2.28
PTPN12-213ENST00000519553 NLRP1Q9C000 1473 aa0.82□□□□□ -2.28
PTPN12-213ENST00000519553 UQCRHLA0A096LP55 91 aa0.82□□□□□ -2.28
PTPN12-213ENST00000519553 A0A0D9SG42 100 aa0.82□□□□□ -2.28
PTPN12-213ENST00000519553 PRO1933Q9H354 126 aa0.82□□□□□ -2.28
PTPN12-213ENST00000519553 C10orf95Q9H7T3 257 aa0.82□□□□□ -2.28
PTPN12-213ENST00000519553 LINC00846Q9NV44 126 aa0.82□□□□□ -2.28
PTPN12-213ENST00000519553 ASXL3Q9C0F0 2248 aa0.82□□□□□ -2.28
PTPN12-213ENST00000519553 PPLO60437 1756 aa0.82□□□□□ -2.28
PTPN12-213ENST00000519553 PLIN4Q96Q06 1357 aa0.82□□□□□ -2.28
PTPN12-213ENST00000519553 ARHGAP35Q9NRY4 1499 aa0.81□□□□□ -2.28
PTPN12-213ENST00000519553 RGPD4Q7Z3J3 1758 aa0.81□□□□□ -2.28
PTPN12-213ENST00000519553 ABCC2Q92887 1545 aa0.81□□□□□ -2.28
PTPN12-213ENST00000519553 TMEM263Q8WUH6 116 aaKnown RBP0.81□□□□□ -2.28
PTPN12-213ENST00000519553 POLA1P09884 1462 aaPredicted RBP0.8□□□□□ -2.28
PTPN12-213ENST00000519553 BTAF1O14981 1849 aa0.8□□□□□ -2.28
PTPN12-213ENST00000519553 ZNF462Q96JM2 2506 aa0.8□□□□□ -2.28
PTPN12-213ENST00000519553 MYO3AQ8NEV4 1616 aa0.8□□□□□ -2.28
PTPN12-213ENST00000519553 A0A1B0GWA3 101 aa0.8□□□□□ -2.28
PTPN12-213ENST00000519553 PSMG4Q5JS54 123 aa0.8□□□□□ -2.28
PTPN12-213ENST00000519553 HIGD1BQ9P298 99 aa0.8□□□□□ -2.28
PTPN12-213ENST00000519553 RABAC1Q9UI14 185 aa0.8□□□□□ -2.28
PTPN12-213ENST00000519553 NUP188Q5SRE5 1749 aa0.8□□□□□ -2.28
PTPN12-213ENST00000519553 KDM3BQ7LBC6 1761 aa0.8□□□□□ -2.28
PTPN12-213ENST00000519553 UACAQ9BZF9 1416 aa0.8□□□□□ -2.28
PTPN12-213ENST00000519553 AHCTF1Q8WYP5 2266 aa0.79□□□□□ -2.28
PTPN12-213ENST00000519553 RGPD3A6NKT7 1758 aaPredicted RBP0.79□□□□□ -2.28
PTPN12-213ENST00000519553 NMBP08949 121 aa0.79□□□□□ -2.28
PTPN12-213ENST00000519553 HMGN3Q15651 99 aa0.79□□□□□ -2.28
PTPN12-213ENST00000519553 LINC01600Q96MT4 127 aa0.79□□□□□ -2.28
PTPN12-213ENST00000519553 PLXNB2O15031 1838 aa0.79□□□□□ -2.28
PTPN12-213ENST00000519553 WNK3Q9BYP7 1800 aa0.79□□□□□ -2.28
PTPN12-213ENST00000519553 EDC4Q6P2E9 1401 aaKnown RBP0.79□□□□□ -2.28
PTPN12-213ENST00000519553 MAGI2Q86UL8 1455 aa0.79□□□□□ -2.28
PTPN12-213ENST00000519553 FAM208BQ5VWN6 2430 aa0.78□□□□□ -2.28
PTPN12-213ENST00000519553 C7orf77A4D0Y5 90 aa0.78□□□□□ -2.28
PTPN12-213ENST00000519553 ZNF815PA8K554 130 aa0.78□□□□□ -2.28
PTPN12-213ENST00000519553 M0R3E3 92 aa0.78□□□□□ -2.28
PTPN12-213ENST00000519553 CYB5AP00167 134 aa0.78□□□□□ -2.28
PTPN12-213ENST00000519553 TDRG1Q3Y452 100 aa0.78□□□□□ -2.28
PTPN12-213ENST00000519553 S100A16Q96FQ6 103 aaKnown RBP0.78□□□□□ -2.28
PTPN12-213ENST00000519553 DNAJC13O75165 2243 aa0.77□□□□□ -2.29
PTPN12-213ENST00000519553 Q6JHZ5 121 aa0.77□□□□□ -2.29
PTPN12-213ENST00000519553 ZNF720Q7Z2F6 126 aa0.77□□□□□ -2.29
PTPN12-213ENST00000519553 UBE2DNLQ8IWF7 75 aa0.77□□□□□ -2.29
PTPN12-213ENST00000519553 FAM103A1Q9BTL3 118 aaKnown RBP0.77□□□□□ -2.29
PTPN12-213ENST00000519553 PLAC8Q9NZF1 115 aa0.77□□□□□ -2.29
PTPN12-213ENST00000519553 UBR1Q8IWV7 1749 aa0.77□□□□□ -2.29
PTPN12-213ENST00000519553 ANKRD17O75179 2603 aaKnown RBP0.77□□□□□ -2.29
PTPN12-213ENST00000519553 LRP6O75581 1613 aa0.76□□□□□ -2.29
PTPN12-213ENST00000519553 MAP3K4Q9Y6R4 1608 aa0.76□□□□□ -2.29
PTPN12-213ENST00000519553 CUX1P39880 1505 aa0.76□□□□□ -2.29
PTPN12-213ENST00000519553 C1orf167Q5SNV9 1468 aa0.76□□□□□ -2.29
PTPN12-213ENST00000519553 ARMS2P0C7Q2 107 aa0.76□□□□□ -2.29
PTPN12-213ENST00000519553 SMIM11AP58511 58 aa0.76□□□□□ -2.29
PTPN12-213ENST00000519553 PEA15Q15121 130 aa0.76□□□□□ -2.29
PTPN12-213ENST00000519553 ETDBQ3ZM63 59 aa0.76□□□□□ -2.29
PTPN12-213ENST00000519553 C10orf113Q5VZT2 155 aa0.76□□□□□ -2.29
PTPN12-213ENST00000519553 SPATA8Q6RVD6 105 aa0.76□□□□□ -2.29
PTPN12-213ENST00000519553 MYH4Q9Y623 1939 aa0.76□□□□□ -2.29
PTPN12-213ENST00000519553 SHPRHQ149N8 1683 aa0.75□□□□□ -2.29
PTPN12-213ENST00000519553 LAMC1P11047 1609 aa0.75□□□□□ -2.29
PTPN12-213ENST00000519553 KIF14Q15058 1648 aa0.75□□□□□ -2.29
PTPN12-213ENST00000519553 A0A087WVE0 104 aa0.75□□□□□ -2.29
PTPN12-213ENST00000519553 F8WEM9 126 aa0.75□□□□□ -2.29
PTPN12-213ENST00000519553 HAMPP81172 84 aa0.75□□□□□ -2.29
PTPN12-213ENST00000519553 ALKAL2Q6UX46 152 aa0.75□□□□□ -2.29
PTPN12-213ENST00000519553 PSENENQ9NZ42 101 aa0.75□□□□□ -2.29
PTPN12-213ENST00000519553 KCPQ6ZWJ8 1503 aa0.74□□□□□ -2.29
PTPN12-213ENST00000519553 CACNA1HO95180 2353 aa0.74□□□□□ -2.29
PTPN12-213ENST00000519553 HMGN2P05204 90 aaKnown RBP0.74□□□□□ -2.29
PTPN12-213ENST00000519553 SNRPFP62306 86 aaKnown RBP0.74□□□□□ -2.29
PTPN12-213ENST00000519553 SSBP3-AS1Q7Z2R9 100 aa0.74□□□□□ -2.29
PTPN12-213ENST00000519553 ERVK-7P63135 1459 aa0.73□□□□□ -2.29
PTPN12-213ENST00000519553 TRBV6-1A0A0K0K1D8 114 aa0.73□□□□□ -2.29
PTPN12-213ENST00000519553 H3BQF6 201 aa0.73□□□□□ -2.29
PTPN12-213ENST00000519553 TARBP1Q13395 1621 aaKnown RBP0.73□□□□□ -2.29
PTPN12-213ENST00000519553 NEXMIFQ5QGS0 1516 aa0.73□□□□□ -2.29
PTPN12-213ENST00000519553 XRN1Q8IZH2 1706 aaKnown RBP0.72□□□□□ -2.29
PTPN12-213ENST00000519553 GOLGA4Q13439 2230 aaKnown RBP0.72□□□□□ -2.29
PTPN12-213ENST00000519553 ERCC6L2Q5T890 1561 aa0.72□□□□□ -2.29
PTPN12-213ENST00000519553 H0Y9P7 68 aa0.72□□□□□ -2.29
PTPN12-213ENST00000519553 NMSQ5H8A3 153 aa0.72□□□□□ -2.29
PTPN12-213ENST00000519553 LINC00643Q86TS7 51 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms