RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 LCE3EQ5T5B0 92 aa1.86□□□□□ -2.11
RNU4-60P-201ENST00000517239 Q96NJ1 140 aa1.86□□□□□ -2.11
RNU4-60P-201ENST00000517239 LINC01558Q9Y6Z2 57 aa1.86□□□□□ -2.11
RNU4-60P-201ENST00000517239 SHPRHQ149N8 1683 aa1.86□□□□□ -2.11
RNU4-60P-201ENST00000517239 CUX1P39880 1505 aa1.86□□□□□ -2.11
RNU4-60P-201ENST00000517239 A0A087WVE0 104 aa1.85□□□□□ -2.11
RNU4-60P-201ENST00000517239 KRTAP10-1P60331 282 aa1.85□□□□□ -2.11
RNU4-60P-201ENST00000517239 KRTAP10-3P60369 221 aa1.85□□□□□ -2.11
RNU4-60P-201ENST00000517239 PLGLAQ15195 96 aa1.85□□□□□ -2.11
RNU4-60P-201ENST00000517239 KRTAP13-4Q3LI77 160 aa1.85□□□□□ -2.11
RNU4-60P-201ENST00000517239 UNQ6190/PRO20217Q6UXQ8 127 aa1.85□□□□□ -2.11
RNU4-60P-201ENST00000517239 HEPN1Q6WQI6 88 aa1.85□□□□□ -2.11
RNU4-60P-201ENST00000517239 COL4A1P02462 1669 aa1.85□□□□□ -2.11
RNU4-60P-201ENST00000517239 DUOX2Q9NRD8 1548 aa1.85□□□□□ -2.11
RNU4-60P-201ENST00000517239 CCDC180Q9P1Z9 1646 aa1.84□□□□□ -2.11
RNU4-60P-201ENST00000517239 ALKQ9UM73 1620 aa1.84□□□□□ -2.11
RNU4-60P-201ENST00000517239 SMIM13P0DJ93 91 aa1.84□□□□□ -2.11
RNU4-60P-201ENST00000517239 ZNF137PP52743 207 aa1.84□□□□□ -2.11
RNU4-60P-201ENST00000517239 HMGN3Q15651 99 aa1.84□□□□□ -2.11
RNU4-60P-201ENST00000517239 VWDEQ8N2E2 1590 aa1.84□□□□□ -2.12
RNU4-60P-201ENST00000517239 TARBP1Q13395 1621 aaKnown RBP1.84□□□□□ -2.12
RNU4-60P-201ENST00000517239 RAPGEF6Q8TEU7 1601 aa1.84□□□□□ -2.12
RNU4-60P-201ENST00000517239 COL4A4P53420 1690 aaPredicted RBP1.83□□□□□ -2.12
RNU4-60P-201ENST00000517239 PLCH1Q4KWH8 1693 aa1.83□□□□□ -2.12
RNU4-60P-201ENST00000517239 EFCAB5A4FU69 1503 aa1.83□□□□□ -2.12
RNU4-60P-201ENST00000517239 D6R8Y8 96 aa1.83□□□□□ -2.12
RNU4-60P-201ENST00000517239 MGPP08493 103 aa1.83□□□□□ -2.12
RNU4-60P-201ENST00000517239 COX17Q14061 63 aa1.83□□□□□ -2.12
RNU4-60P-201ENST00000517239 MUSTN1Q8IVN3 82 aa1.83□□□□□ -2.12
RNU4-60P-201ENST00000517239 S100ZQ8WXG8 99 aa1.83□□□□□ -2.12
RNU4-60P-201ENST00000517239 PIK3C2BO00750 1634 aa1.83□□□□□ -2.12
RNU4-60P-201ENST00000517239 BAHCC1Q9P281 2608 aa1.83□□□□□ -2.12
RNU4-60P-201ENST00000517239 HFM1A2PYH4 1435 aa1.83□□□□□ -2.12
RNU4-60P-201ENST00000517239 CEBPZOSA8MTT3 80 aa1.82□□□□□ -2.12
RNU4-60P-201ENST00000517239 KRTAP12-2P59991 146 aa1.82□□□□□ -2.12
RNU4-60P-201ENST00000517239 C6orf201Q7Z4U5 140 aa1.82□□□□□ -2.12
RNU4-60P-201ENST00000517239 ZMYM4Q5VZL5 1548 aa1.81□□□□□ -2.12
RNU4-60P-201ENST00000517239 ERCC6L2Q5T890 1561 aa1.81□□□□□ -2.12
RNU4-60P-201ENST00000517239 TRBV30A0A0K0K1B3 111 aa1.81□□□□□ -2.12
RNU4-60P-201ENST00000517239 UMAD1C9J7I0 102 aa1.81□□□□□ -2.12
RNU4-60P-201ENST00000517239 NCR3O14931 201 aa1.81□□□□□ -2.12
RNU4-60P-201ENST00000517239 SMIM4Q8WVI0 70 aa1.81□□□□□ -2.12
RNU4-60P-201ENST00000517239 PROK2Q9HC23 129 aa1.81□□□□□ -2.12
RNU4-60P-201ENST00000517239 PAPPA2Q9BXP8 1791 aa1.8□□□□□ -2.12
RNU4-60P-201ENST00000517239 DEFB107AQ8IZN7 70 aa1.8□□□□□ -2.12
RNU4-60P-201ENST00000517239 KRTAP4-7Q9BYR0 210 aa1.8□□□□□ -2.12
RNU4-60P-201ENST00000517239 CACNA1GO43497 2377 aa1.8□□□□□ -2.12
RNU4-60P-201ENST00000517239 NHSL1Q5SYE7 1610 aa1.8□□□□□ -2.12
RNU4-60P-201ENST00000517239 LRRC37A2A6NM11 1700 aa1.8□□□□□ -2.12
RNU4-60P-201ENST00000517239 KRTAP13-3Q3SY46 172 aa1.79□□□□□ -2.12
RNU4-60P-201ENST00000517239 PCOTHQ58A44 107 aa1.79□□□□□ -2.12
RNU4-60P-201ENST00000517239 TIAM1Q13009 1591 aa1.79□□□□□ -2.12
RNU4-60P-201ENST00000517239 MED13LQ71F56 2210 aa1.79□□□□□ -2.12
RNU4-60P-201ENST00000517239 TIAM2Q8IVF5 1701 aa1.78□□□□□ -2.12
RNU4-60P-201ENST00000517239 ABCA9Q8IUA7 1624 aa1.78□□□□□ -2.12
RNU4-60P-201ENST00000517239 CEP170BQ9Y4F5 1589 aaPredicted RBP1.78□□□□□ -2.12
RNU4-60P-201ENST00000517239 Q6JHZ5 121 aa1.78□□□□□ -2.12
RNU4-60P-201ENST00000517239 DEFB121Q5J5C9 76 aa1.77□□□□□ -2.13
RNU4-60P-201ENST00000517239 C10orf99Q6UWK7 81 aa1.77□□□□□ -2.13
RNU4-60P-201ENST00000517239 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.77□□□□□ -2.13
RNU4-60P-201ENST00000517239 LINC00575Q6W349 94 aa1.77□□□□□ -2.13
RNU4-60P-201ENST00000517239 SPRR4Q96PI1 79 aa1.77□□□□□ -2.13
RNU4-60P-201ENST00000517239 KRTAP4-5Q9BYR2 181 aa1.77□□□□□ -2.13
RNU4-60P-201ENST00000517239 UBE2D4Q9Y2X8 147 aa1.77□□□□□ -2.13
RNU4-60P-201ENST00000517239 NCOA6Q14686 2063 aaPredicted RBP1.77□□□□□ -2.13
RNU4-60P-201ENST00000517239 XRN1Q8IZH2 1706 aaKnown RBP1.77□□□□□ -2.13
RNU4-60P-201ENST00000517239 WIZO95785 1651 aa1.77□□□□□ -2.13
RNU4-60P-201ENST00000517239 SDK1Q7Z5N4 2213 aa1.76□□□□□ -2.13
RNU4-60P-201ENST00000517239 ASXL1Q8IXJ9 1541 aa1.76□□□□□ -2.13
RNU4-60P-201ENST00000517239 C1orf167Q5SNV9 1468 aa1.76□□□□□ -2.13
RNU4-60P-201ENST00000517239 H0Y9P7 68 aa1.76□□□□□ -2.13
RNU4-60P-201ENST00000517239 LY6G6CO95867 125 aa1.76□□□□□ -2.13
RNU4-60P-201ENST00000517239 GNGT1P63211 74 aa1.76□□□□□ -2.13
RNU4-60P-201ENST00000517239 SMIM11BQ8TCY0 68 aa1.76□□□□□ -2.13
RNU4-60P-201ENST00000517239 LINC00846Q9NV44 126 aa1.76□□□□□ -2.13
RNU4-60P-201ENST00000517239 PARP4Q9UKK3 1724 aaKnown RBP1.76□□□□□ -2.13
RNU4-60P-201ENST00000517239 ZNF831Q5JPB2 1677 aa1.76□□□□□ -2.13
RNU4-60P-201ENST00000517239 CFAP43Q8NDM7 1665 aa1.76□□□□□ -2.13
RNU4-60P-201ENST00000517239 NKTRP30414 1462 aaKnown RBP1.75□□□□□ -2.13
RNU4-60P-201ENST00000517239 ATP7BP35670 1465 aa1.75□□□□□ -2.13
RNU4-60P-201ENST00000517239 COL14A1Q05707 1796 aaKnown RBP1.75□□□□□ -2.13
RNU4-60P-201ENST00000517239 PREX1Q8TCU6 1659 aa1.75□□□□□ -2.13
RNU4-60P-201ENST00000517239 A0A087WXM4 84 aa1.75□□□□□ -2.13
RNU4-60P-201ENST00000517239 GCHFRP30047 84 aa1.75□□□□□ -2.13
RNU4-60P-201ENST00000517239 ATP5EP2Q5VTU8 51 aa1.75□□□□□ -2.13
RNU4-60P-201ENST00000517239 KIAA0556O60303 1618 aa1.74□□□□□ -2.13
RNU4-60P-201ENST00000517239 PREX2Q70Z35 1606 aa1.74□□□□□ -2.13
RNU4-60P-201ENST00000517239 SSC5DA1L4H1 1573 aa1.74□□□□□ -2.13
RNU4-60P-201ENST00000517239 KRTAP12-1P59990 96 aa1.74□□□□□ -2.13
RNU4-60P-201ENST00000517239 ZCCHC13Q8WW36 166 aaKnown RBP1.74□□□□□ -2.13
RNU4-60P-201ENST00000517239 LINC00472Q9H8W2 130 aa1.74□□□□□ -2.13
RNU4-60P-201ENST00000517239 URB2Q14146 1524 aaKnown RBP1.74□□□□□ -2.13
RNU4-60P-201ENST00000517239 BCORQ6W2J9 1755 aa1.74□□□□□ -2.13
RNU4-60P-201ENST00000517239 CICQ96RK0 1608 aaPredicted RBP1.73□□□□□ -2.13
RNU4-60P-201ENST00000517239 ABCA1O95477 2261 aa1.73□□□□□ -2.13
RNU4-60P-201ENST00000517239 DNAJC13O75165 2243 aa1.73□□□□□ -2.13
RNU4-60P-201ENST00000517239 A0A087WWC5 75 aa1.73□□□□□ -2.13
RNU4-60P-201ENST00000517239 GVQW2A0A096LPI5 108 aaPredicted RBP1.73□□□□□ -2.13
RNU4-60P-201ENST00000517239 A0A1B0GUT8 65 aa1.73□□□□□ -2.13
RNU4-60P-201ENST00000517239 SPINK7P58062 85 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms