RNA–Protein interactions for RNA: ENST00000516419.1

SNORA48.9-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 162 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.9-201ENST00000516419 S100A8P05109 93 aa0.68□□□□□ -2.3
SNORA48.9-201ENST00000516419 S100A10P60903 97 aa0.68□□□□□ -2.3
SNORA48.9-201ENST00000516419 CPSF1Q10570 1443 aaKnown RBP0.68□□□□□ -2.3
SNORA48.9-201ENST00000516419 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.68□□□□□ -2.3
SNORA48.9-201ENST00000516419 TTC37Q6PGP7 1564 aa0.68□□□□□ -2.3
SNORA48.9-201ENST00000516419 Q6ZQY7 126 aa0.68□□□□□ -2.3
SNORA48.9-201ENST00000516419 ZNF818PQ6ZRF7 136 aa0.68□□□□□ -2.3
SNORA48.9-201ENST00000516419 CYP2G1PQ6ZSU1 146 aa0.68□□□□□ -2.3
SNORA48.9-201ENST00000516419 Q86TA4 180 aa0.68□□□□□ -2.3
SNORA48.9-201ENST00000516419 VPS8Q8N3P4 1428 aa0.68□□□□□ -2.3
SNORA48.9-201ENST00000516419 CASKIN1Q8WXD9 1431 aa0.68□□□□□ -2.3
SNORA48.9-201ENST00000516419 TSLPQ969D9 159 aa0.68□□□□□ -2.3
SNORA48.9-201ENST00000516419 CNTLNQ9NXG0 1405 aa0.68□□□□□ -2.3
SNORA48.9-201ENST00000516419 SPTBP11277 2137 aa0.68□□□□□ -2.3
SNORA48.9-201ENST00000516419 SPTBN1Q01082 2364 aaKnown RBP0.68□□□□□ -2.3
SNORA48.9-201ENST00000516419 RNF17Q9BXT8 1623 aaKnown RBP0.67□□□□□ -2.3
SNORA48.9-201ENST00000516419 GLI2P10070 1586 aa0.67□□□□□ -2.3
SNORA48.9-201ENST00000516419 DIP2AQ14689 1571 aa0.67□□□□□ -2.3
SNORA48.9-201ENST00000516419 C10orf71Q711Q0 1435 aa0.67□□□□□ -2.3
SNORA48.9-201ENST00000516419 FAM24AA6NFZ4 105 aa0.67□□□□□ -2.3
SNORA48.9-201ENST00000516419 TMEM262E9PQX1 116 aa0.67□□□□□ -2.3
SNORA48.9-201ENST00000516419 CAV3P56539 151 aa0.67□□□□□ -2.3
SNORA48.9-201ENST00000516419 C10orf99Q6UWK7 81 aa0.67□□□□□ -2.3
SNORA48.9-201ENST00000516419 COMMD6Q7Z4G1 85 aa0.67□□□□□ -2.3
SNORA48.9-201ENST00000516419 DEFB123Q8N688 67 aa0.67□□□□□ -2.3
SNORA48.9-201ENST00000516419 COX7B2Q8TF08 81 aa0.67□□□□□ -2.3
SNORA48.9-201ENST00000516419 Q96NJ1 140 aa0.67□□□□□ -2.3
SNORA48.9-201ENST00000516419 AQP10Q96PS8 301 aa0.67□□□□□ -2.3
SNORA48.9-201ENST00000516419 SNHG12Q9BXW3 62 aa0.67□□□□□ -2.3
SNORA48.9-201ENST00000516419 RREB1Q92766 1687 aa0.67□□□□□ -2.3
SNORA48.9-201ENST00000516419 MAP3K1Q13233 1512 aa0.67□□□□□ -2.3
SNORA48.9-201ENST00000516419 ABCA13Q86UQ4 5058 aa0.67□□□□□ -2.3
SNORA48.9-201ENST00000516419 SONP18583 2426 aaKnown RBP0.67□□□□□ -2.3
SNORA48.9-201ENST00000516419 TMEM131LA2VDJ0 1609 aa0.67□□□□□ -2.3
SNORA48.9-201ENST00000516419 ARAP2Q8WZ64 1704 aa0.67□□□□□ -2.3
SNORA48.9-201ENST00000516419 UNC13BO14795 1591 aa0.66□□□□□ -2.3
SNORA48.9-201ENST00000516419 FAT4Q6V0I7 4981 aa0.66□□□□□ -2.3
SNORA48.9-201ENST00000516419 HERC2O95714 4834 aa0.66□□□□□ -2.3
SNORA48.9-201ENST00000516419 TET3O43151 1660 aa0.66□□□□□ -2.3
SNORA48.9-201ENST00000516419 ZNF142P52746 1687 aaPredicted RBP0.66□□□□□ -2.3
SNORA48.9-201ENST00000516419 DOPEY2Q9Y3R5 2298 aa0.66□□□□□ -2.3
SNORA48.9-201ENST00000516419 NBASA2RRP1 2371 aa0.66□□□□□ -2.3
SNORA48.9-201ENST00000516419 TRBV7-1A0A0A6YYK4 115 aa0.66□□□□□ -2.3
SNORA48.9-201ENST00000516419 TRBV30A0A0K0K1B3 111 aa0.66□□□□□ -2.3
SNORA48.9-201ENST00000516419 UBE2L5PA0A1B0GUS4 154 aa0.66□□□□□ -2.3
SNORA48.9-201ENST00000516419 FXYD1O00168 92 aa0.66□□□□□ -2.3
SNORA48.9-201ENST00000516419 SSSCA1O60232 199 aa0.66□□□□□ -2.3
SNORA48.9-201ENST00000516419 MT-ATP8P03928 68 aa0.66□□□□□ -2.3
SNORA48.9-201ENST00000516419 PKIAP61925 76 aa0.66□□□□□ -2.3
SNORA48.9-201ENST00000516419 UBE2L3P68036 154 aaKnown RBP0.66□□□□□ -2.3
SNORA48.9-201ENST00000516419 DCDP81605 110 aaKnown RBP0.66□□□□□ -2.3
SNORA48.9-201ENST00000516419 SSBP1Q04837 148 aaKnown RBP0.66□□□□□ -2.3
SNORA48.9-201ENST00000516419 KLKP1Q107X0 134 aa0.66□□□□□ -2.3
SNORA48.9-201ENST00000516419 C4orf33Q8N1A6 199 aa0.66□□□□□ -2.3
SNORA48.9-201ENST00000516419 PLAC4Q8WY50 150 aa0.66□□□□□ -2.3
SNORA48.9-201ENST00000516419 CYP4F30PQ9H0H9 118 aa0.66□□□□□ -2.3
SNORA48.9-201ENST00000516419 BET1LQ9NYM9 111 aa0.66□□□□□ -2.3
SNORA48.9-201ENST00000516419 TARBP1Q13395 1621 aaKnown RBP0.66□□□□□ -2.3
SNORA48.9-201ENST00000516419 CSPG4Q6UVK1 2322 aa0.66□□□□□ -2.3
SNORA48.9-201ENST00000516419 NUP188Q5SRE5 1749 aa0.66□□□□□ -2.3
SNORA48.9-201ENST00000516419 TEX14Q8IWB6 1497 aa0.66□□□□□ -2.3
SNORA48.9-201ENST00000516419 SHPRHQ149N8 1683 aa0.65□□□□□ -2.3
SNORA48.9-201ENST00000516419 ASXL3Q9C0F0 2248 aa0.65□□□□□ -2.3
SNORA48.9-201ENST00000516419 CDK13Q14004 1512 aaKnown RBP0.65□□□□□ -2.31
SNORA48.9-201ENST00000516419 SCRIBQ14160 1630 aa0.65□□□□□ -2.31
SNORA48.9-201ENST00000516419 TNS1Q9HBL0 1735 aaKnown RBP0.65□□□□□ -2.31
SNORA48.9-201ENST00000516419 PHGR1C9JFL3 82 aa0.65□□□□□ -2.31
SNORA48.9-201ENST00000516419 PRH1P02810 166 aa0.65□□□□□ -2.31
SNORA48.9-201ENST00000516419 SNCAP37840 140 aa0.65□□□□□ -2.31
SNORA48.9-201ENST00000516419 EDDM3BP56851 147 aa0.65□□□□□ -2.31
SNORA48.9-201ENST00000516419 C10orf128Q5T292 105 aa0.65□□□□□ -2.31
SNORA48.9-201ENST00000516419 FAM213BQ8TBF2 198 aa0.65□□□□□ -2.31
SNORA48.9-201ENST00000516419 PRO3102Q9H379 93 aa0.65□□□□□ -2.31
SNORA48.9-201ENST00000516419 TMEM14BQ9NUH8 114 aa0.65□□□□□ -2.31
SNORA48.9-201ENST00000516419 KDM5AP29375 1690 aaKnown RBP0.65□□□□□ -2.31
SNORA48.9-201ENST00000516419 DOCK1Q14185 1865 aa0.65□□□□□ -2.31
SNORA48.9-201ENST00000516419 ABCC5O15440 1437 aa0.64□□□□□ -2.31
SNORA48.9-201ENST00000516419 SCAPERQ9BY12 1400 aa0.64□□□□□ -2.31
SNORA48.9-201ENST00000516419 KCPQ6ZWJ8 1503 aa0.64□□□□□ -2.31
SNORA48.9-201ENST00000516419 KIAA0586Q9BVV6 1533 aa0.64□□□□□ -2.31
SNORA48.9-201ENST00000516419 NRXN2Q9P2S2 1712 aa0.64□□□□□ -2.31
SNORA48.9-201ENST00000516419 AFDNP55196 1824 aaKnown RBP0.64□□□□□ -2.31
SNORA48.9-201ENST00000516419 PHIPQ8WWQ0 1821 aa0.64□□□□□ -2.31
SNORA48.9-201ENST00000516419 MED13LQ71F56 2210 aa0.64□□□□□ -2.31
SNORA48.9-201ENST00000516419 TRBV7-3A0A075B6L6 115 aa0.64□□□□□ -2.31
SNORA48.9-201ENST00000516419 A0A096LNT2 108 aa0.64□□□□□ -2.31
SNORA48.9-201ENST00000516419 PIGBOS1A0A0B4J2F0 54 aa0.64□□□□□ -2.31
SNORA48.9-201ENST00000516419 hADV29S1A0JD25 119 aa0.64□□□□□ -2.31
SNORA48.9-201ENST00000516419 H3BQ15 152 aa0.64□□□□□ -2.31
SNORA48.9-201ENST00000516419 LY6G6CO95867 125 aa0.64□□□□□ -2.31
SNORA48.9-201ENST00000516419 ATP5EP56381 51 aaPredicted RBP0.64□□□□□ -2.31
SNORA48.9-201ENST00000516419 Q5VV11 94 aa0.64□□□□□ -2.31
SNORA48.9-201ENST00000516419 WFDC6Q9BQY6 131 aa0.64□□□□□ -2.31
SNORA48.9-201ENST00000516419 FANCD2Q9BXW9 1451 aa0.64□□□□□ -2.31
SNORA48.9-201ENST00000516419 RAPGEF2Q9Y4G8 1499 aa0.64□□□□□ -2.31
SNORA48.9-201ENST00000516419 CEP170BQ9Y4F5 1589 aaPredicted RBP0.64□□□□□ -2.31
SNORA48.9-201ENST00000516419 C3P01024 1663 aa0.64□□□□□ -2.31
SNORA48.9-201ENST00000516419 ABCA1O95477 2261 aa0.64□□□□□ -2.31
SNORA48.9-201ENST00000516419 CACNA1EQ15878 2313 aa0.64□□□□□ -2.31
SNORA48.9-201ENST00000516419 PATJQ8NI35 1801 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms