RNA–Protein interactions for RNA: ENST00000513448.5

PROM1-215, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 2,042 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-215ENST00000513448 ZNF625Q96I27 306 aaPredicted RBP6.58□□□□□ -1.36
PROM1-215ENST00000513448 ICOSQ9Y6W8 199 aa6.58□□□□□ -1.36
PROM1-215ENST00000513448 ACANP16112 2415 aa6.57□□□□□ -1.36
PROM1-215ENST00000513448 C21orf62-AS1Q17RA5 79 aa6.57□□□□□ -1.36
PROM1-215ENST00000513448 C9orf66Q5T8R8 295 aa6.57□□□□□ -1.36
PROM1-215ENST00000513448 LINC00308Q8TCZ7 52 aa6.57□□□□□ -1.36
PROM1-215ENST00000513448 HIVEP2P31629 2446 aa6.57□□□□□ -1.36
PROM1-215ENST00000513448 KMT2BQ9UMN6 2715 aaPredicted RBP6.57□□□□□ -1.36
PROM1-215ENST00000513448 H7C2G1 150 aa6.57□□□□□ -1.36
PROM1-215ENST00000513448 TRIAP1O43715 76 aa6.57□□□□□ -1.36
PROM1-215ENST00000513448 LY6G6DO95868 133 aa6.57□□□□□ -1.36
PROM1-215ENST00000513448 KRTAP10-3P60369 221 aa6.57□□□□□ -1.36
PROM1-215ENST00000513448 PRIMA1Q86XR5 153 aa6.57□□□□□ -1.36
PROM1-215ENST00000513448 UNC79Q9P2D8 2635 aa6.56□□□□□ -1.36
PROM1-215ENST00000513448 TRBV10-2A0A0K0K1G8 114 aa6.56□□□□□ -1.36
PROM1-215ENST00000513448 C9JAW5 83 aa6.56□□□□□ -1.36
PROM1-215ENST00000513448 TMEM262E9PQX1 116 aa6.56□□□□□ -1.36
PROM1-215ENST00000513448 LINC01620Q4KN68 170 aa6.56□□□□□ -1.36
PROM1-215ENST00000513448 ANKRD29Q8N6D5 301 aa6.56□□□□□ -1.36
PROM1-215ENST00000513448 ITPR2Q14571 2701 aa6.56□□□□□ -1.36
PROM1-215ENST00000513448 LYRM9A8MSI8 78 aa6.55□□□□□ -1.36
PROM1-215ENST00000513448 MTORP42345 2549 aa6.55□□□□□ -1.36
PROM1-215ENST00000513448 LOC100131303A0A0U1RQF7 123 aa6.55□□□□□ -1.36
PROM1-215ENST00000513448 A0A1B0GUV1 79 aa6.55□□□□□ -1.36
PROM1-215ENST00000513448 MEIG1Q5JSS6 88 aa6.55□□□□□ -1.36
PROM1-215ENST00000513448 H3BT86 120 aa6.54□□□□□ -1.36
PROM1-215ENST00000513448 CRLF1O75462 422 aa6.54□□□□□ -1.36
PROM1-215ENST00000513448 CARD19Q96LW7 228 aa6.54□□□□□ -1.36
PROM1-215ENST00000513448 SMR3AQ99954 134 aa6.54□□□□□ -1.36
PROM1-215ENST00000513448 CHCHD5Q9BSY4 110 aa6.54□□□□□ -1.36
PROM1-215ENST00000513448 PRO0255Q9UI72 69 aa6.54□□□□□ -1.36
PROM1-215ENST00000513448 X6R8D5 127 aa6.54□□□□□ -1.36
PROM1-215ENST00000513448 HELZ2Q9BYK8 2649 aaKnown RBP6.54□□□□□ -1.36
PROM1-215ENST00000513448 SETXQ7Z333 2677 aaKnown RBP6.54□□□□□ -1.36
PROM1-215ENST00000513448 IGHV3OR16-9A0A0B4J2B5 98 aa6.54□□□□□ -1.36
PROM1-215ENST00000513448 LST1O00453 97 aa6.54□□□□□ -1.36
PROM1-215ENST00000513448 RPL13AP40429 203 aaKnown RBP6.54□□□□□ -1.36
PROM1-215ENST00000513448 GAGE6Q13070 117 aa6.54□□□□□ -1.36
PROM1-215ENST00000513448 COX7B2Q8TF08 81 aa6.54□□□□□ -1.36
PROM1-215ENST00000513448 SETD2Q9BYW2 2564 aaPredicted RBP6.53□□□□□ -1.36
PROM1-215ENST00000513448 A0A087WZ39 114 aa6.53□□□□□ -1.36
PROM1-215ENST00000513448 DEFB130BP0DP73 79 aa6.53□□□□□ -1.36
PROM1-215ENST00000513448 DEFB130AP0DP74 79 aa6.53□□□□□ -1.36
PROM1-215ENST00000513448 NPC2P61916 151 aa6.53□□□□□ -1.36
PROM1-215ENST00000513448 LINC01561Q8N1V8 128 aa6.53□□□□□ -1.36
PROM1-215ENST00000513448 APOC4P55056 127 aa6.52□□□□□ -1.37
PROM1-215ENST00000513448 SHISA2Q6UWI4 295 aa6.52□□□□□ -1.37
PROM1-215ENST00000513448 DAND5Q8N907 189 aa6.52□□□□□ -1.37
PROM1-215ENST00000513448 NOTCH3Q9UM47 2321 aa6.52□□□□□ -1.37
PROM1-215ENST00000513448 JMJD1CQ15652 2540 aa6.52□□□□□ -1.37
PROM1-215ENST00000513448 IGLV4-60A0A075B6I1 120 aa6.52□□□□□ -1.37
PROM1-215ENST00000513448 GYPEP15421 78 aa6.52□□□□□ -1.37
PROM1-215ENST00000513448 FAM222AQ5U5X8 452 aa6.52□□□□□ -1.37
PROM1-215ENST00000513448 TRAV26-1A0A087WT03 109 aa6.51□□□□□ -1.37
PROM1-215ENST00000513448 TRAV13-2A0A0B4J235 113 aa6.51□□□□□ -1.37
PROM1-215ENST00000513448 IBA57-AS1B1ANH7 110 aa6.51□□□□□ -1.37
PROM1-215ENST00000513448 CDIP1Q9H305 208 aa6.51□□□□□ -1.37
PROM1-215ENST00000513448 LINC00959A0A1B0GUT2 108 aa6.5□□□□□ -1.37
PROM1-215ENST00000513448 COX7A2LO14548 114 aa6.5□□□□□ -1.37
PROM1-215ENST00000513448 C2orf82Q6UX34 121 aa6.5□□□□□ -1.37
PROM1-215ENST00000513448 SOSTDC1Q6X4U4 206 aa6.5□□□□□ -1.37
PROM1-215ENST00000513448 SS18Q15532 418 aa6.5□□□□□ -1.37
PROM1-215ENST00000513448 CITED1Q99966 193 aa6.5□□□□□ -1.37
PROM1-215ENST00000513448 INAFM1C9JVW0 142 aa6.49□□□□□ -1.37
PROM1-215ENST00000513448 NTN5Q8WTR8 489 aaPredicted RBP6.49□□□□□ -1.37
PROM1-215ENST00000513448 PAX4O43316 350 aa6.49□□□□□ -1.37
PROM1-215ENST00000513448 WIPF1O43516 503 aa6.49□□□□□ -1.37
PROM1-215ENST00000513448 MIFP14174 115 aa6.49□□□□□ -1.37
PROM1-215ENST00000513448 WFDC9Q8NEX5 89 aa6.49□□□□□ -1.37
PROM1-215ENST00000513448 UBE2WQ96B02 151 aa6.49□□□□□ -1.37
PROM1-215ENST00000513448 NIPBLQ6KC79 2804 aaeCLIP6.48□□□□□ -1.37
PROM1-215ENST00000513448 C2CD3Q4AC94 2353 aa6.48□□□□□ -1.37
PROM1-215ENST00000513448 A0A0U1RRA0 63 aa6.48□□□□□ -1.37
PROM1-215ENST00000513448 TRACP01848 142 aa6.48□□□□□ -1.37
PROM1-215ENST00000513448 DEFB121Q5J5C9 76 aa6.48□□□□□ -1.37
PROM1-215ENST00000513448 MIR7-3HGQ8N6C7 128 aa6.48□□□□□ -1.37
PROM1-215ENST00000513448 TOMM7Q9P0U1 55 aa6.48□□□□□ -1.37
PROM1-215ENST00000513448 FASNP49327 2511 aaKnown RBP6.48□□□□□ -1.37
PROM1-215ENST00000513448 RPL28P46779 137 aaKnown RBP6.47□□□□□ -1.37
PROM1-215ENST00000513448 Q8IZM0 81 aa6.47□□□□□ -1.37
PROM1-215ENST00000513448 CLEC2BQ92478 149 aa6.47□□□□□ -1.37
PROM1-215ENST00000513448 IGKV3OR2-268A0A0C4DH90 116 aa6.47□□□□□ -1.37
PROM1-215ENST00000513448 CRPP02741 224 aa6.47□□□□□ -1.37
PROM1-215ENST00000513448 FAM240AA0A1B0GVK7 77 aa6.46□□□□□ -1.38
PROM1-215ENST00000513448 LINC00158P58513 81 aa6.46□□□□□ -1.38
PROM1-215ENST00000513448 DAD1P61803 113 aa6.46□□□□□ -1.38
PROM1-215ENST00000513448 C6orf226Q5I0X4 101 aa6.46□□□□□ -1.38
PROM1-215ENST00000513448 SND1-IT1Q9HBX3 110 aa6.46□□□□□ -1.38
PROM1-215ENST00000513448 TEX49A0A1B0GTD5 131 aa6.45□□□□□ -1.38
PROM1-215ENST00000513448 ATP5G1P05496 136 aa6.45□□□□□ -1.38
PROM1-215ENST00000513448 CXCL5P42830 114 aa6.45□□□□□ -1.38
PROM1-215ENST00000513448 DEFB135Q30KP9 77 aa6.45□□□□□ -1.38
PROM1-215ENST00000513448 C5orf38Q86SI9 138 aa6.45□□□□□ -1.38
PROM1-215ENST00000513448 TRAV8-4A0A0B4J246 113 aa6.45□□□□□ -1.38
PROM1-215ENST00000513448 IGHV4-28A0A0C4DH34 117 aa6.45□□□□□ -1.38
PROM1-215ENST00000513448 SPART-AS1P0CW21 52 aa6.45□□□□□ -1.38
PROM1-215ENST00000513448 XGP55808 180 aa6.45□□□□□ -1.38
PROM1-215ENST00000513448 CD164L2Q6UWJ8 174 aa6.45□□□□□ -1.38
PROM1-215ENST00000513448 H0YGX0 51 aa6.44□□□□□ -1.38
PROM1-215ENST00000513448 COX17Q14061 63 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms