RNA–Protein interactions for RNA: ENST00000511816.1

CALCOCO2-220, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 562 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-220ENST00000511816 NINQ8N4C6 2090 aa1.87□□□□□ -2.11
CALCOCO2-220ENST00000511816 CEP192Q8TEP8 1941 aa1.87□□□□□ -2.11
CALCOCO2-220ENST00000511816 ZGRF1Q86YA3 2104 aa1.87□□□□□ -2.11
CALCOCO2-220ENST00000511816 HEATR1Q9H583 2144 aaKnown RBP1.87□□□□□ -2.11
CALCOCO2-220ENST00000511816 MED13Q9UHV7 2174 aa1.86□□□□□ -2.11
CALCOCO2-220ENST00000511816 PDCD11Q14690 1871 aaKnown RBP1.86□□□□□ -2.11
CALCOCO2-220ENST00000511816 NBDYA0A0U1RRE5 68 aa1.86□□□□□ -2.11
CALCOCO2-220ENST00000511816 H3BVH4 76 aa1.86□□□□□ -2.11
CALCOCO2-220ENST00000511816 M0R3E3 92 aa1.86□□□□□ -2.11
CALCOCO2-220ENST00000511816 IFI27P40305 119 aaPredicted RBP1.86□□□□□ -2.11
CALCOCO2-220ENST00000511816 BAGE2Q86Y30 109 aa1.86□□□□□ -2.11
CALCOCO2-220ENST00000511816 FDCSPQ8NFU4 85 aa1.86□□□□□ -2.11
CALCOCO2-220ENST00000511816 PROK2Q9HC23 129 aa1.86□□□□□ -2.11
CALCOCO2-220ENST00000511816 ABCA6Q8N139 1617 aa1.86□□□□□ -2.11
CALCOCO2-220ENST00000511816 GBF1Q92538 1859 aa1.86□□□□□ -2.11
CALCOCO2-220ENST00000511816 RNF17Q9BXT8 1623 aaKnown RBP1.85□□□□□ -2.11
CALCOCO2-220ENST00000511816 A0A087WVE0 104 aa1.85□□□□□ -2.11
CALCOCO2-220ENST00000511816 INE1O15225 51 aa1.85□□□□□ -2.11
CALCOCO2-220ENST00000511816 MGPP08493 103 aa1.85□□□□□ -2.11
CALCOCO2-220ENST00000511816 C3orf79P0CE67 100 aa1.85□□□□□ -2.11
CALCOCO2-220ENST00000511816 FXYD4P59646 89 aa1.85□□□□□ -2.11
CALCOCO2-220ENST00000511816 UBE2D4Q9Y2X8 147 aa1.85□□□□□ -2.11
CALCOCO2-220ENST00000511816 LINC01558Q9Y6Z2 57 aa1.85□□□□□ -2.11
CALCOCO2-220ENST00000511816 NKTRP30414 1462 aaKnown RBP1.85□□□□□ -2.11
CALCOCO2-220ENST00000511816 FANCD2Q9BXW9 1451 aa1.85□□□□□ -2.11
CALCOCO2-220ENST00000511816 PLCH1Q4KWH8 1693 aa1.85□□□□□ -2.11
CALCOCO2-220ENST00000511816 ARFGEF1Q9Y6D6 1849 aa1.84□□□□□ -2.11
CALCOCO2-220ENST00000511816 RP1P56715 2156 aa1.84□□□□□ -2.11
CALCOCO2-220ENST00000511816 XRN1Q8IZH2 1706 aaKnown RBP1.84□□□□□ -2.11
CALCOCO2-220ENST00000511816 LOC110117498A0A087WWA1 95 aa1.84□□□□□ -2.11
CALCOCO2-220ENST00000511816 BAGE3Q86Y29 109 aa1.84□□□□□ -2.11
CALCOCO2-220ENST00000511816 C5orf56Q8N8D9 126 aa1.84□□□□□ -2.11
CALCOCO2-220ENST00000511816 LOC285556D6RIA3 1793 aa1.84□□□□□ -2.12
CALCOCO2-220ENST00000511816 CR1P17927 2039 aa1.84□□□□□ -2.12
CALCOCO2-220ENST00000511816 CDC42BPGQ6DT37 1551 aa1.84□□□□□ -2.12
CALCOCO2-220ENST00000511816 BRWD1Q9NSI6 2320 aa1.83□□□□□ -2.12
CALCOCO2-220ENST00000511816 MAP2P11137 1827 aaKnown RBP1.83□□□□□ -2.12
CALCOCO2-220ENST00000511816 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.83□□□□□ -2.12
CALCOCO2-220ENST00000511816 A0A087WTM6 91 aa1.83□□□□□ -2.12
CALCOCO2-220ENST00000511816 M0R2N4 97 aa1.83□□□□□ -2.12
CALCOCO2-220ENST00000511816 COX17Q14061 63 aa1.83□□□□□ -2.12
CALCOCO2-220ENST00000511816 WFDC6Q9BQY6 131 aa1.83□□□□□ -2.12
CALCOCO2-220ENST00000511816 SNURFQ9Y675 71 aa1.83□□□□□ -2.12
CALCOCO2-220ENST00000511816 PIK3C2BO00750 1634 aa1.83□□□□□ -2.12
CALCOCO2-220ENST00000511816 PREX1Q8TCU6 1659 aa1.83□□□□□ -2.12
CALCOCO2-220ENST00000511816 RALGAPBQ86X10 1494 aa1.82□□□□□ -2.12
CALCOCO2-220ENST00000511816 PRXQ9BXM0 1461 aa1.82□□□□□ -2.12
CALCOCO2-220ENST00000511816 KIAA0100Q14667 2235 aaKnown RBP1.82□□□□□ -2.12
CALCOCO2-220ENST00000511816 CEP170BQ9Y4F5 1589 aaPredicted RBP1.82□□□□□ -2.12
CALCOCO2-220ENST00000511816 TRAV1-2A0A0B4J238 106 aa1.82□□□□□ -2.12
CALCOCO2-220ENST00000511816 ATXN8Q156A1 80 aa1.82□□□□□ -2.12
CALCOCO2-220ENST00000511816 ZNF625Q96I27 306 aaPredicted RBP1.82□□□□□ -2.12
CALCOCO2-220ENST00000511816 SIPA1L3O60292 1781 aaPredicted RBP1.82□□□□□ -2.12
CALCOCO2-220ENST00000511816 ATP7BP35670 1465 aa1.82□□□□□ -2.12
CALCOCO2-220ENST00000511816 ALKQ9UM73 1620 aa1.81□□□□□ -2.12
CALCOCO2-220ENST00000511816 KIF1AQ12756 1690 aa1.81□□□□□ -2.12
CALCOCO2-220ENST00000511816 CFAP43Q8NDM7 1665 aa1.81□□□□□ -2.12
CALCOCO2-220ENST00000511816 NUP188Q5SRE5 1749 aa1.81□□□□□ -2.12
CALCOCO2-220ENST00000511816 TRGV2A0A075B6R0 118 aa1.81□□□□□ -2.12
CALCOCO2-220ENST00000511816 A0A1B0GUT8 65 aa1.81□□□□□ -2.12
CALCOCO2-220ENST00000511816 DEFB107AQ8IZN7 70 aa1.81□□□□□ -2.12
CALCOCO2-220ENST00000511816 SMIM4Q8WVI0 70 aa1.81□□□□□ -2.12
CALCOCO2-220ENST00000511816 LINC00208Q96KT6 92 aa1.81□□□□□ -2.12
CALCOCO2-220ENST00000511816 DOCK11Q5JSL3 2073 aa1.81□□□□□ -2.12
CALCOCO2-220ENST00000511816 UNC13CQ8NB66 2214 aa1.81□□□□□ -2.12
CALCOCO2-220ENST00000511816 LAMC1P11047 1609 aa1.8□□□□□ -2.12
CALCOCO2-220ENST00000511816 SHPRHQ149N8 1683 aa1.8□□□□□ -2.12
CALCOCO2-220ENST00000511816 ITSN2Q9NZM3 1697 aa1.8□□□□□ -2.12
CALCOCO2-220ENST00000511816 CRYBG1Q9Y4K1 1723 aa1.8□□□□□ -2.12
CALCOCO2-220ENST00000511816 TNRC6BQ9UPQ9 1833 aaKnown RBP1.8□□□□□ -2.12
CALCOCO2-220ENST00000511816 FXYD6-FXYD2A0A087WZ82 144 aa1.8□□□□□ -2.12
CALCOCO2-220ENST00000511816 TRBV7-4A0A0J9YYF1 115 aa1.8□□□□□ -2.12
CALCOCO2-220ENST00000511816 H0Y9P7 68 aa1.8□□□□□ -2.12
CALCOCO2-220ENST00000511816 PI4KAP42356 2102 aa1.8□□□□□ -2.12
CALCOCO2-220ENST00000511816 ZNF137PP52743 207 aa1.8□□□□□ -2.12
CALCOCO2-220ENST00000511816 CAV3P56539 151 aa1.8□□□□□ -2.12
CALCOCO2-220ENST00000511816 GDF5OSQ5U4N7 250 aa1.8□□□□□ -2.12
CALCOCO2-220ENST00000511816 ZCCHC13Q8WW36 166 aaKnown RBP1.8□□□□□ -2.12
CALCOCO2-220ENST00000511816 FAM103A1Q9BTL3 118 aaKnown RBP1.8□□□□□ -2.12
CALCOCO2-220ENST00000511816 LINC00846Q9NV44 126 aa1.8□□□□□ -2.12
CALCOCO2-220ENST00000511816 SYCP2Q9BX26 1530 aa1.8□□□□□ -2.12
CALCOCO2-220ENST00000511816 GLI2P10070 1586 aa1.8□□□□□ -2.12
CALCOCO2-220ENST00000511816 PKD1L3Q7Z443 1732 aa1.8□□□□□ -2.12
CALCOCO2-220ENST00000511816 ESPL1Q14674 2120 aa1.79□□□□□ -2.12
CALCOCO2-220ENST00000511816 TRGV1A0A0A0MS02 117 aa1.79□□□□□ -2.12
CALCOCO2-220ENST00000511816 ACYP2P14621 99 aa1.79□□□□□ -2.12
CALCOCO2-220ENST00000511816 Q6ZQY7 126 aa1.79□□□□□ -2.12
CALCOCO2-220ENST00000511816 Q6ZRN7 208 aaPredicted RBP1.79□□□□□ -2.12
CALCOCO2-220ENST00000511816 Q96NJ1 140 aa1.79□□□□□ -2.12
CALCOCO2-220ENST00000511816 CD163L1Q9NR16 1453 aa1.79□□□□□ -2.12
CALCOCO2-220ENST00000511816 TOP2AP11388 1531 aaKnown RBP1.79□□□□□ -2.12
CALCOCO2-220ENST00000511816 PAPPAQ13219 1627 aa1.79□□□□□ -2.12
CALCOCO2-220ENST00000511816 USP32Q8NFA0 1604 aa1.79□□□□□ -2.12
CALCOCO2-220ENST00000511816 PHRF1Q9P1Y6 1649 aaKnown RBP1.79□□□□□ -2.12
CALCOCO2-220ENST00000511816 C5P01031 1676 aa1.79□□□□□ -2.12
CALCOCO2-220ENST00000511816 NHSQ6T4R5 1651 aa1.79□□□□□ -2.12
CALCOCO2-220ENST00000511816 MED12Q93074 2177 aa1.79□□□□□ -2.12
CALCOCO2-220ENST00000511816 SPAG17Q6Q759 2223 aa1.79□□□□□ -2.12
CALCOCO2-220ENST00000511816 WIZO95785 1651 aa1.78□□□□□ -2.12
CALCOCO2-220ENST00000511816 COL4A1P02462 1669 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms