RNA–Protein interactions for RNA: ENST00000509490.5

PDGFRA-208, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,991 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-208ENST00000509490 IGKV2-28A0A075B6P5 120 aa6.48□□□□□ -1.37
PDGFRA-208ENST00000509490 ZNF561-AS1K7EIQ3 104 aa6.48□□□□□ -1.37
PDGFRA-208ENST00000509490 UBE2L6O14933 153 aa6.48□□□□□ -1.37
PDGFRA-208ENST00000509490 IGKV2D-28P01615 120 aa6.48□□□□□ -1.37
PDGFRA-208ENST00000509490 TRBV6-8A0A0A6YYG3 113 aa6.48□□□□□ -1.37
PDGFRA-208ENST00000509490 KRTAP10-9P60411 292 aa6.48□□□□□ -1.37
PDGFRA-208ENST00000509490 FHL2Q14192 279 aa6.48□□□□□ -1.37
PDGFRA-208ENST00000509490 C5orf38Q86SI9 138 aa6.48□□□□□ -1.37
PDGFRA-208ENST00000509490 KIR2DL5BQ8NHK3 375 aa6.48□□□□□ -1.37
PDGFRA-208ENST00000509490 BAALC-AS2P0C853 105 aa6.48□□□□□ -1.37
PDGFRA-208ENST00000509490 FAM218AQ96MZ4 157 aa6.48□□□□□ -1.37
PDGFRA-208ENST00000509490 NOP10Q9NPE3 64 aaKnown RBP6.48□□□□□ -1.37
PDGFRA-208ENST00000509490 USP9XQ93008 2570 aaPredicted RBP6.47□□□□□ -1.37
PDGFRA-208ENST00000509490 CRPP02741 224 aa6.47□□□□□ -1.37
PDGFRA-208ENST00000509490 RNASE1P07998 156 aaKnown RBP6.47□□□□□ -1.37
PDGFRA-208ENST00000509490 LINC00337Q8N6G1 96 aa6.47□□□□□ -1.37
PDGFRA-208ENST00000509490 LINC00167Q96N53 147 aa6.47□□□□□ -1.37
PDGFRA-208ENST00000509490 NCOR2Q9Y618 2525 aa6.47□□□□□ -1.37
PDGFRA-208ENST00000509490 SPTBN4Q9H254 2564 aa6.47□□□□□ -1.37
PDGFRA-208ENST00000509490 A0A1B0GUV1 79 aa6.46□□□□□ -1.37
PDGFRA-208ENST00000509490 A0A1B0GX51 115 aa6.46□□□□□ -1.37
PDGFRA-208ENST00000509490 MALP21145 153 aa6.46□□□□□ -1.37
PDGFRA-208ENST00000509490 SEC61GP60059 68 aa6.46□□□□□ -1.37
PDGFRA-208ENST00000509490 C11orf44Q8N8P7 122 aa6.46□□□□□ -1.37
PDGFRA-208ENST00000509490 SORL1Q92673 2214 aa6.46□□□□□ -1.38
PDGFRA-208ENST00000509490 SMCR5Q8TEV8 140 aa6.46□□□□□ -1.38
PDGFRA-208ENST00000509490 FBN2P35556 2912 aa6.46□□□□□ -1.38
PDGFRA-208ENST00000509490 CCDC179H3BU77 68 aa6.45□□□□□ -1.38
PDGFRA-208ENST00000509490 HIST1H4AP62805 103 aaKnown RBP6.45□□□□□ -1.38
PDGFRA-208ENST00000509490 MIR7-3HGQ8N6C7 128 aa6.45□□□□□ -1.38
PDGFRA-208ENST00000509490 SND1-IT1Q9HBX3 110 aa6.45□□□□□ -1.38
PDGFRA-208ENST00000509490 ESM1Q9NQ30 184 aa6.45□□□□□ -1.38
PDGFRA-208ENST00000509490 CELSR2Q9HCU4 2923 aa6.45□□□□□ -1.38
PDGFRA-208ENST00000509490 CHD8Q9HCK8 2581 aa6.45□□□□□ -1.38
PDGFRA-208ENST00000509490 CCL18P55774 89 aa6.45□□□□□ -1.38
PDGFRA-208ENST00000509490 AKAP9Q99996 3911 aa6.44□□□□□ -1.38
PDGFRA-208ENST00000509490 ANKRD17O75179 2603 aaKnown RBP6.44□□□□□ -1.38
PDGFRA-208ENST00000509490 B5MCH6 92 aa6.44□□□□□ -1.38
PDGFRA-208ENST00000509490 Q8IZM0 81 aa6.44□□□□□ -1.38
PDGFRA-208ENST00000509490 ZNF843Q8N446 348 aa6.44□□□□□ -1.38
PDGFRA-208ENST00000509490 SMIM11BQ8TCY0 68 aa6.44□□□□□ -1.38
PDGFRA-208ENST00000509490 TMEM126AQ9H061 195 aa6.44□□□□□ -1.38
PDGFRA-208ENST00000509490 UBR5O95071 2799 aaPredicted RBP6.44□□□□□ -1.38
PDGFRA-208ENST00000509490 IGSF10Q6WRI0 2623 aa6.43□□□□□ -1.38
PDGFRA-208ENST00000509490 IGLV4-60A0A075B6I1 120 aa6.43□□□□□ -1.38
PDGFRA-208ENST00000509490 TRGV2A0A075B6R0 118 aa6.43□□□□□ -1.38
PDGFRA-208ENST00000509490 LINC01006Q8NI28 216 aa6.43□□□□□ -1.38
PDGFRA-208ENST00000509490 A0A0U1RRA0 63 aa6.43□□□□□ -1.38
PDGFRA-208ENST00000509490 LINC00959A0A1B0GUT2 108 aa6.43□□□□□ -1.38
PDGFRA-208ENST00000509490 NDUFC2O95298 119 aa6.43□□□□□ -1.38
PDGFRA-208ENST00000509490 KRTAP1-1Q07627 177 aa6.43□□□□□ -1.38
PDGFRA-208ENST00000509490 MXRA5Q9NR99 2828 aa6.43□□□□□ -1.38
PDGFRA-208ENST00000509490 MUC7Q8TAX7 377 aa6.42□□□□□ -1.38
PDGFRA-208ENST00000509490 TRGV4A0A0C4DH28 118 aa6.42□□□□□ -1.38
PDGFRA-208ENST00000509490 LOC100131303A0A0U1RQF7 123 aa6.42□□□□□ -1.38
PDGFRA-208ENST00000509490 SMIM9A6NGZ8 99 aa6.42□□□□□ -1.38
PDGFRA-208ENST00000509490 FLNCQ14315 2725 aa6.42□□□□□ -1.38
PDGFRA-208ENST00000509490 COX17Q14061 63 aa6.42□□□□□ -1.38
PDGFRA-208ENST00000509490 KLK5Q9Y337 293 aaPredicted RBP6.42□□□□□ -1.38
PDGFRA-208ENST00000509490 BBC3Q96PG8 261 aaPredicted RBP6.41□□□□□ -1.38
PDGFRA-208ENST00000509490 SPG11Q96JI7 2443 aa6.41□□□□□ -1.38
PDGFRA-208ENST00000509490 PIEZO1Q92508 2521 aa6.41□□□□□ -1.38
PDGFRA-208ENST00000509490 IGHV4-28A0A0C4DH34 117 aa6.41□□□□□ -1.38
PDGFRA-208ENST00000509490 Q6JHZ5 121 aa6.41□□□□□ -1.38
PDGFRA-208ENST00000509490 SS18L2Q9UHA2 77 aa6.41□□□□□ -1.38
PDGFRA-208ENST00000509490 COL12A1Q99715 3063 aa6.4□□□□□ -1.38
PDGFRA-208ENST00000509490 A0A087WYN8 130 aa6.4□□□□□ -1.39
PDGFRA-208ENST00000509490 LINC00158P58513 81 aa6.4□□□□□ -1.39
PDGFRA-208ENST00000509490 CRYBG3Q68DQ2 2970 aa6.39□□□□□ -1.39
PDGFRA-208ENST00000509490 FAM236AA0A1B0GUQ0 79 aa6.39□□□□□ -1.39
PDGFRA-208ENST00000509490 FAM236BA0A1B0GV22 79 aa6.39□□□□□ -1.39
PDGFRA-208ENST00000509490 UQCRQO14949 82 aa6.39□□□□□ -1.39
PDGFRA-208ENST00000509490 LINC00526Q96FQ7 95 aa6.39□□□□□ -1.39
PDGFRA-208ENST00000509490 DNAL4O96015 105 aa6.39□□□□□ -1.39
PDGFRA-208ENST00000509490 C3orf22Q8N5N4 141 aa6.39□□□□□ -1.39
PDGFRA-208ENST00000509490 CHCHD5Q9BSY4 110 aa6.39□□□□□ -1.39
PDGFRA-208ENST00000509490 SS18Q15532 418 aa6.38□□□□□ -1.39
PDGFRA-208ENST00000509490 UTP20O75691 2785 aaKnown RBP6.38□□□□□ -1.39
PDGFRA-208ENST00000509490 KIAA0087Q14695 138 aa6.38□□□□□ -1.39
PDGFRA-208ENST00000509490 LYRM9A8MSI8 78 aa6.37□□□□□ -1.39
PDGFRA-208ENST00000509490 HILS1P60008 231 aa6.37□□□□□ -1.39
PDGFRA-208ENST00000509490 NANOS2P60321 138 aaKnown RBP6.37□□□□□ -1.39
PDGFRA-208ENST00000509490 WFDC11Q8NEX6 87 aa6.37□□□□□ -1.39
PDGFRA-208ENST00000509490 X6R8D5 127 aa6.37□□□□□ -1.39
PDGFRA-208ENST00000509490 USP9YO00507 2555 aaPredicted RBP6.37□□□□□ -1.39
PDGFRA-208ENST00000509490 CREBBPQ92793 2442 aa6.37□□□□□ -1.39
PDGFRA-208ENST00000509490 ZANQ9Y493 2812 aa6.37□□□□□ -1.39
PDGFRA-208ENST00000509490 PRB1P04280 392 aa6.37□□□□□ -1.39
PDGFRA-208ENST00000509490 RPL35AP18077 110 aaKnown RBP6.37□□□□□ -1.39
PDGFRA-208ENST00000509490 C2orf48Q96LS8 159 aa6.37□□□□□ -1.39
PDGFRA-208ENST00000509490 WFDC10AQ9H1F0 79 aa6.37□□□□□ -1.39
PDGFRA-208ENST00000509490 Q9HAA7 133 aa6.37□□□□□ -1.39
PDGFRA-208ENST00000509490 PRO0255Q9UI72 69 aa6.37□□□□□ -1.39
PDGFRA-208ENST00000509490 ATOX1O00244 68 aa6.36□□□□□ -1.39
PDGFRA-208ENST00000509490 JMJD7-PLA2G4BH0Y9G9 81 aa6.36□□□□□ -1.39
PDGFRA-208ENST00000509490 CD164L2Q6UWJ8 174 aa6.36□□□□□ -1.39
PDGFRA-208ENST00000509490 LYPD5Q6UWN5 251 aa6.36□□□□□ -1.39
PDGFRA-208ENST00000509490 TOMM7Q9P0U1 55 aa6.36□□□□□ -1.39
PDGFRA-208ENST00000509490 CRYGAP11844 174 aa6.36□□□□□ -1.39
PDGFRA-208ENST00000509490 ORMDL1Q9P0S3 153 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms