RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 GAGE6Q13070 117 aa7.78□□□□□ -1.16
SEC31A-228ENST00000509142 CHCHD5Q9BSY4 110 aa7.78□□□□□ -1.16
SEC31A-228ENST00000509142 CDC42SE2Q9NRR3 84 aa7.78□□□□□ -1.16
SEC31A-228ENST00000509142 CSDC2Q9Y534 153 aaKnown RBP7.78□□□□□ -1.16
SEC31A-228ENST00000509142 PLAC8L1A1L4L8 177 aa7.78□□□□□ -1.16
SEC31A-228ENST00000509142 CKS1BP61024 79 aa7.78□□□□□ -1.16
SEC31A-228ENST00000509142 LINC01620Q4KN68 170 aa7.78□□□□□ -1.16
SEC31A-228ENST00000509142 CSNK1G2-AS1Q8NCQ2 148 aa7.78□□□□□ -1.16
SEC31A-228ENST00000509142 SPANXDQ9BXN6 97 aa7.78□□□□□ -1.16
SEC31A-228ENST00000509142 SPANXCQ9NY87 97 aa7.78□□□□□ -1.16
SEC31A-228ENST00000509142 TEX49A0A1B0GTD5 131 aa7.78□□□□□ -1.16
SEC31A-228ENST00000509142 NTN5Q8WTR8 489 aaPredicted RBP7.78□□□□□ -1.16
SEC31A-228ENST00000509142 OVOL2Q9BRP0 275 aa7.78□□□□□ -1.16
SEC31A-228ENST00000509142 IGLV5-45A0A087WSX0 123 aa7.77□□□□□ -1.17
SEC31A-228ENST00000509142 TRBV30A0A0K0K1B3 111 aa7.77□□□□□ -1.17
SEC31A-228ENST00000509142 CRLF1O75462 422 aa7.77□□□□□ -1.17
SEC31A-228ENST00000509142 PRIMA1Q86XR5 153 aa7.77□□□□□ -1.17
SEC31A-228ENST00000509142 NDUFA1O15239 70 aa7.77□□□□□ -1.17
SEC31A-228ENST00000509142 COX6CP09669 75 aa7.77□□□□□ -1.17
SEC31A-228ENST00000509142 CLEC2BQ92478 149 aa7.76□□□□□ -1.17
SEC31A-228ENST00000509142 KRTAP10-3P60369 221 aa7.76□□□□□ -1.17
SEC31A-228ENST00000509142 M0QXV9 152 aa7.76□□□□□ -1.17
SEC31A-228ENST00000509142 IFITM1P13164 125 aa7.76□□□□□ -1.17
SEC31A-228ENST00000509142 LINC00482Q8N8I6 264 aa7.76□□□□□ -1.17
SEC31A-228ENST00000509142 ICOSQ9Y6W8 199 aa7.76□□□□□ -1.17
SEC31A-228ENST00000509142 INAFM1C9JVW0 142 aa7.75□□□□□ -1.17
SEC31A-228ENST00000509142 ATXN8Q156A1 80 aa7.75□□□□□ -1.17
SEC31A-228ENST00000509142 LINC01600Q96MT4 127 aa7.75□□□□□ -1.17
SEC31A-228ENST00000509142 H7C423 109 aa7.75□□□□□ -1.17
SEC31A-228ENST00000509142 TIMM17BO60830 172 aa7.75□□□□□ -1.17
SEC31A-228ENST00000509142 FHL2Q14192 279 aa7.75□□□□□ -1.17
SEC31A-228ENST00000509142 TOMM7Q9P0U1 55 aa7.75□□□□□ -1.17
SEC31A-228ENST00000509142 ANK3Q12955 4377 aaKnown RBP7.75□□□□□ -1.17
SEC31A-228ENST00000509142 SMIM1B2RUZ4 78 aa7.75□□□□□ -1.17
SEC31A-228ENST00000509142 A0A1B0GV72 72 aa7.74□□□□□ -1.17
SEC31A-228ENST00000509142 CITED1Q99966 193 aa7.74□□□□□ -1.17
SEC31A-228ENST00000509142 IGLV5-39A0A0G2JS06 123 aa7.74□□□□□ -1.17
SEC31A-228ENST00000509142 TRBV6-8A0A0A6YYG3 113 aa7.74□□□□□ -1.17
SEC31A-228ENST00000509142 TMEM262E9PQX1 116 aa7.74□□□□□ -1.17
SEC31A-228ENST00000509142 SOSTDC1Q6X4U4 206 aa7.74□□□□□ -1.17
SEC31A-228ENST00000509142 COPS9Q8WXC6 57 aa7.74□□□□□ -1.17
SEC31A-228ENST00000509142 TRAV26-1A0A087WT03 109 aa7.73□□□□□ -1.17
SEC31A-228ENST00000509142 RPL13AP40429 203 aaKnown RBP7.73□□□□□ -1.17
SEC31A-228ENST00000509142 TRBV10-2A0A0K0K1G8 114 aa7.73□□□□□ -1.17
SEC31A-228ENST00000509142 C9orf66Q5T8R8 295 aa7.73□□□□□ -1.17
SEC31A-228ENST00000509142 GYPEP15421 78 aa7.72□□□□□ -1.17
SEC31A-228ENST00000509142 LINC00308Q8TCZ7 52 aa7.72□□□□□ -1.17
SEC31A-228ENST00000509142 RNF183Q96D59 192 aa7.71□□□□□ -1.17
SEC31A-228ENST00000509142 GCN1Q92616 2671 aaKnown RBP7.71□□□□□ -1.17
SEC31A-228ENST00000509142 NHLRC4P0CG21 123 aaPredicted RBP7.71□□□□□ -1.18
SEC31A-228ENST00000509142 HERV-K104P63124 156 aa7.71□□□□□ -1.18
SEC31A-228ENST00000509142 FAM19A3Q7Z5A8 133 aa7.71□□□□□ -1.18
SEC31A-228ENST00000509142 IGLV4-60A0A075B6I1 120 aa7.71□□□□□ -1.18
SEC31A-228ENST00000509142 KIR2DL5BQ8NHK3 375 aa7.71□□□□□ -1.18
SEC31A-228ENST00000509142 A0A096LPF7 62 aa7.7□□□□□ -1.18
SEC31A-228ENST00000509142 KMT2BQ9UMN6 2715 aaPredicted RBP7.7□□□□□ -1.18
SEC31A-228ENST00000509142 LST1O00453 97 aa7.7□□□□□ -1.18
SEC31A-228ENST00000509142 NBEAL2Q6ZNJ1 2754 aa7.7□□□□□ -1.18
SEC31A-228ENST00000509142 F5H768 121 aa7.7□□□□□ -1.18
SEC31A-228ENST00000509142 DEFB4AO15263 64 aa7.69□□□□□ -1.18
SEC31A-228ENST00000509142 DEFB135Q30KP9 77 aa7.69□□□□□ -1.18
SEC31A-228ENST00000509142 COX7B2Q8TF08 81 aa7.69□□□□□ -1.18
SEC31A-228ENST00000509142 SMIM9A6NGZ8 99 aa7.69□□□□□ -1.18
SEC31A-228ENST00000509142 C2orf82Q6UX34 121 aa7.69□□□□□ -1.18
SEC31A-228ENST00000509142 C5orf38Q86SI9 138 aa7.69□□□□□ -1.18
SEC31A-228ENST00000509142 FAM222AQ5U5X8 452 aa7.69□□□□□ -1.18
SEC31A-228ENST00000509142 PRO0255Q9UI72 69 aa7.69□□□□□ -1.18
SEC31A-228ENST00000509142 PAX4O43316 350 aa7.68□□□□□ -1.18
SEC31A-228ENST00000509142 ATRQ13535 2644 aa7.68□□□□□ -1.18
SEC31A-228ENST00000509142 LINC00158P58513 81 aa7.68□□□□□ -1.18
SEC31A-228ENST00000509142 X6R8D5 127 aa7.68□□□□□ -1.18
SEC31A-228ENST00000509142 APOC4P55056 127 aa7.67□□□□□ -1.18
SEC31A-228ENST00000509142 UBE2WQ96B02 151 aa7.67□□□□□ -1.18
SEC31A-228ENST00000509142 SPATA3Q8NHX4 192 aa7.67□□□□□ -1.18
SEC31A-228ENST00000509142 CLPSL2Q6UWE3 100 aa7.66□□□□□ -1.18
SEC31A-228ENST00000509142 C22orf24Q9Y442 160 aa7.66□□□□□ -1.18
SEC31A-228ENST00000509142 XCL1P47992 114 aa7.66□□□□□ -1.18
SEC31A-228ENST00000509142 DAD1P61803 113 aa7.66□□□□□ -1.18
SEC31A-228ENST00000509142 SS18Q15532 418 aa7.66□□□□□ -1.18
SEC31A-228ENST00000509142 C11orf68Q9H3H3 251 aaKnown RBP7.66□□□□□ -1.18
SEC31A-228ENST00000509142 LYRM9A8MSI8 78 aa7.65□□□□□ -1.18
SEC31A-228ENST00000509142 C6orf226Q5I0X4 101 aa7.65□□□□□ -1.18
SEC31A-228ENST00000509142 MIR7-3HGQ8N6C7 128 aa7.65□□□□□ -1.18
SEC31A-228ENST00000509142 SHISA2Q6UWI4 295 aa7.65□□□□□ -1.18
SEC31A-228ENST00000509142 TRAV8-4A0A0B4J246 113 aa7.65□□□□□ -1.19
SEC31A-228ENST00000509142 LINC00959A0A1B0GUT2 108 aa7.65□□□□□ -1.19
SEC31A-228ENST00000509142 H3BT86 120 aa7.65□□□□□ -1.19
SEC31A-228ENST00000509142 HTN3P15516 51 aa7.65□□□□□ -1.19
SEC31A-228ENST00000509142 PFN2P35080 140 aa7.65□□□□□ -1.19
SEC31A-228ENST00000509142 FAM218AQ96MZ4 157 aa7.65□□□□□ -1.19
SEC31A-228ENST00000509142 IGHV3OR16-9A0A0B4J2B5 98 aa7.64□□□□□ -1.19
SEC31A-228ENST00000509142 TTC32Q5I0X7 151 aa7.64□□□□□ -1.19
SEC31A-228ENST00000509142 DEFB121Q5J5C9 76 aa7.64□□□□□ -1.19
SEC31A-228ENST00000509142 LINC00612Q8N6U2 182 aa7.64□□□□□ -1.19
SEC31A-228ENST00000509142 C15orf53Q8NAA6 179 aa7.64□□□□□ -1.19
SEC31A-228ENST00000509142 NSD1Q96L73 2696 aaPredicted RBP7.64□□□□□ -1.19
SEC31A-228ENST00000509142 A0A087WZ39 114 aa7.63□□□□□ -1.19
SEC31A-228ENST00000509142 IGHV4-28A0A0C4DH34 117 aa7.63□□□□□ -1.19
SEC31A-228ENST00000509142 CRPP02741 224 aa7.63□□□□□ -1.19
SEC31A-228ENST00000509142 ANAPC13Q9BS18 74 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms